RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 TMEM92Q6UXU6 159 aa9.71□□□□□ -0.86
CALD1-218ENST00000478075 Q6ZNB5 142 aa9.71□□□□□ -0.86
CALD1-218ENST00000478075 PSDA5PKW4 1024 aaPredicted RBP9.7□□□□□ -0.86
CALD1-218ENST00000478075 ARHGAP33O14559 1287 aa9.69□□□□□ -0.86
CALD1-218ENST00000478075 A0A0G2JS52 829 aa9.68□□□□□ -0.86
CALD1-218ENST00000478075 KCTD12Q96CX2 325 aaKnown RBP9.66□□□□□ -0.86
CALD1-218ENST00000478075 AXIN2Q9Y2T1 843 aa9.66□□□□□ -0.86
CALD1-218ENST00000478075 KLHL34Q8N239 644 aa9.64□□□□□ -0.87
CALD1-218ENST00000478075 FBXO3Q9UK99 471 aa9.64□□□□□ -0.87
CALD1-218ENST00000478075 LAPTM4AQ15012 233 aa9.63□□□□□ -0.87
CALD1-218ENST00000478075 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.87
CALD1-218ENST00000478075 HRO43593 1189 aa9.62□□□□□ -0.87
CALD1-218ENST00000478075 POTEEQ6S8J3 1075 aa9.62□□□□□ -0.87
CALD1-218ENST00000478075 NUDT7P0C024 238 aa9.6□□□□□ -0.87
CALD1-218ENST00000478075 LHX6Q9UPM6 363 aa9.6□□□□□ -0.87
CALD1-218ENST00000478075 SOX12O15370 315 aa9.59□□□□□ -0.87
CALD1-218ENST00000478075 EFCAB3Q8N7B9 438 aa9.59□□□□□ -0.87
CALD1-218ENST00000478075 KCNH8Q96L42 1107 aa9.56□□□□□ -0.88
CALD1-218ENST00000478075 SLC34A2O95436 690 aa9.53□□□□□ -0.88
CALD1-218ENST00000478075 PTPN5P54829 565 aa9.53□□□□□ -0.88
CALD1-218ENST00000478075 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
CALD1-218ENST00000478075 TRAF7Q6Q0C0 670 aa9.47□□□□□ -0.89
CALD1-218ENST00000478075 TRIM41Q8WV44 630 aa9.44□□□□□ -0.9
CALD1-218ENST00000478075 EHMT2Q96KQ7 1210 aa9.44□□□□□ -0.9
CALD1-218ENST00000478075 PPP4R3BQ5MIZ7 849 aa9.43□□□□□ -0.9
CALD1-218ENST00000478075 DMRTA1Q5VZB9 504 aa9.43□□□□□ -0.9
CALD1-218ENST00000478075 THSD4Q6ZMP0 1018 aa9.42□□□□□ -0.9
CALD1-218ENST00000478075 MS4A4AQ96JQ5 239 aa9.41□□□□□ -0.9
CALD1-218ENST00000478075 CIZ1Q9ULV3 898 aaPredicted RBP9.41□□□□□ -0.9
CALD1-218ENST00000478075 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
CALD1-218ENST00000478075 PSEN2P49810 448 aa9.4□□□□□ -0.9
CALD1-218ENST00000478075 KIF3CO14782 793 aa9.39□□□□□ -0.91
CALD1-218ENST00000478075 VASPP50552 380 aaPredicted RBP9.38□□□□□ -0.91
CALD1-218ENST00000478075 NLRP6P59044 892 aa9.36□□□□□ -0.91
CALD1-218ENST00000478075 PHF8Q9UPP1 1060 aa9.36□□□□□ -0.91
CALD1-218ENST00000478075 C2orf72A6NCS6 295 aa9.35□□□□□ -0.91
CALD1-218ENST00000478075 SLC4A5Q9BY07 1137 aa9.35□□□□□ -0.91
CALD1-218ENST00000478075 VPS9D1Q9Y2B5 631 aa9.35□□□□□ -0.91
CALD1-218ENST00000478075 ITGBL1O95965 494 aaPredicted RBP9.34□□□□□ -0.91
CALD1-218ENST00000478075 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
CALD1-218ENST00000478075 WNT2BQ93097 391 aa9.33□□□□□ -0.92
CALD1-218ENST00000478075 GFRA3O60609 400 aa9.32□□□□□ -0.92
CALD1-218ENST00000478075 ZNF787Q6DD87 383 aa9.31□□□□□ -0.92
CALD1-218ENST00000478075 TMC2Q8TDI7 906 aa9.31□□□□□ -0.92
CALD1-218ENST00000478075 KCNK17Q96T54 332 aa9.3□□□□□ -0.92
CALD1-218ENST00000478075 FKBP8Q14318 412 aa9.29□□□□□ -0.92
CALD1-218ENST00000478075 MRPL50Q8N5N7 158 aaKnown RBP9.28□□□□□ -0.92
CALD1-218ENST00000478075 NYAP1Q6ZVC0 841 aa9.27□□□□□ -0.93
CALD1-218ENST00000478075 KDM4FA0A1W2PPD8 638 aa9.26□□□□□ -0.93
CALD1-218ENST00000478075 NRG2O14511 850 aaPredicted RBP9.26□□□□□ -0.93
CALD1-218ENST00000478075 NBPF3Q9H094 633 aa9.26□□□□□ -0.93
CALD1-218ENST00000478075 LCE2BO14633 110 aa9.25□□□□□ -0.93
CALD1-218ENST00000478075 TBC1D12O60347 775 aa9.25□□□□□ -0.93
CALD1-218ENST00000478075 PTCD2Q8WV60 388 aaKnown RBP9.25□□□□□ -0.93
CALD1-218ENST00000478075 BHMG1C9JSJ3 638 aaPredicted RBP9.23□□□□□ -0.93
CALD1-218ENST00000478075 VGFO15240 615 aaPredicted RBP9.22□□□□□ -0.93
CALD1-218ENST00000478075 ZNF775Q96BV0 537 aaPredicted RBP9.22□□□□□ -0.93
CALD1-218ENST00000478075 KCNC4Q03721 635 aa9.21□□□□□ -0.94
CALD1-218ENST00000478075 RIOK3O14730 519 aaKnown RBP9.2□□□□□ -0.94
CALD1-218ENST00000478075 FBXO22Q8NEZ5 403 aa9.19□□□□□ -0.94
CALD1-218ENST00000478075 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.17□□□□□ -0.94
CALD1-218ENST00000478075 ZFP91Q96JP5 570 aaPredicted RBP9.17□□□□□ -0.94
CALD1-218ENST00000478075 TAOK2Q9UL54 1235 aa9.17□□□□□ -0.94
CALD1-218ENST00000478075 ANKK1Q8NFD2 765 aa9.16□□□□□ -0.94
CALD1-218ENST00000478075 BCL2L12Q9HB09 334 aa9.16□□□□□ -0.94
CALD1-218ENST00000478075 PTPREP23469 700 aa9.14□□□□□ -0.95
CALD1-218ENST00000478075 ZBED2Q9BTP6 218 aa9.1□□□□□ -0.95
CALD1-218ENST00000478075 V9GY48 417 aaPredicted RBP9.08□□□□□ -0.96
CALD1-218ENST00000478075 ZNF454Q8N9F8 522 aa9.06□□□□□ -0.96
CALD1-218ENST00000478075 PRKD2Q9BZL6 878 aa9.04□□□□□ -0.96
CALD1-218ENST00000478075 MFRPQ9BY79 579 aa9.03□□□□□ -0.96
CALD1-218ENST00000478075 SOWAHBA6NEL2 793 aa9.02□□□□□ -0.97
CALD1-218ENST00000478075 FOXK1P85037 733 aa9.02□□□□□ -0.97
CALD1-218ENST00000478075 LAPTM4BQ86VI4 370 aa9.02□□□□□ -0.97
CALD1-218ENST00000478075 IFNLR1Q8IU57 520 aaPredicted RBP9.02□□□□□ -0.97
CALD1-218ENST00000478075 STK17AQ9UEE5 414 aa9.02□□□□□ -0.97
CALD1-218ENST00000478075 LOC100996750A0A140TA64 210 aa9.01□□□□□ -0.97
CALD1-218ENST00000478075 KRTAP4-6Q9BYQ5 205 aa9.01□□□□□ -0.97
CALD1-218ENST00000478075 PLPP6Q8IY26 295 aa9□□□□□ -0.97
CALD1-218ENST00000478075 BCL11BQ9C0K0 894 aaPredicted RBP9□□□□□ -0.97
CALD1-218ENST00000478075 RABGEF1Q9UJ41 708 aa9□□□□□ -0.97
CALD1-218ENST00000478075 PDZRN3Q9UPQ7 1066 aa9□□□□□ -0.97
CALD1-218ENST00000478075 BCAMP50895 628 aa8.96□□□□□ -0.98
CALD1-218ENST00000478075 FOSBP53539 338 aa8.96□□□□□ -0.98
CALD1-218ENST00000478075 TREML4Q6UXN2 200 aa8.96□□□□□ -0.98
CALD1-218ENST00000478075 RNF25Q96BH1 459 aaPredicted RBP8.96□□□□□ -0.98
CALD1-218ENST00000478075 STK24Q9Y6E0 443 aa8.96□□□□□ -0.98
CALD1-218ENST00000478075 WBP1LQ9NX94 342 aa8.94□□□□□ -0.98
CALD1-218ENST00000478075 JPH4Q96JJ6 628 aa8.92□□□□□ -0.98
CALD1-218ENST00000478075 GPHNQ9NQX3 736 aaPredicted RBP8.92□□□□□ -0.98
CALD1-218ENST00000478075 ZDHHC16Q969W1 377 aa8.91□□□□□ -0.98
CALD1-218ENST00000478075 PPP1R3GB7ZBB8 358 aa8.9□□□□□ -0.98
CALD1-218ENST00000478075 INSM1Q01101 510 aaPredicted RBP8.9□□□□□ -0.98
CALD1-218ENST00000478075 TSR3Q9UJK0 312 aaKnown RBP8.9□□□□□ -0.98
CALD1-218ENST00000478075 ZFRQ96KR1 1074 aaKnown RBP8.89□□□□□ -0.99
CALD1-218ENST00000478075 OXER1Q8TDS5 423 aa8.88□□□□□ -0.99
CALD1-218ENST00000478075 PKDCCQ504Y2 493 aa8.86□□□□□ -0.99
CALD1-218ENST00000478075 STK25O00506 426 aa8.85□□□□□ -0.99
CALD1-218ENST00000478075 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
CALD1-218ENST00000478075 ONECUT3O60422 494 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms