RNA–Protein interactions for RNA: ENST00000477991.1

SCUBE1-206, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 3

Gene SCUBE1, Length 489 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-206ENST00000477991 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
SCUBE1-206ENST00000477991 SCAPERQ9BY12 1400 aa17.13■□□□□ 0.33
SCUBE1-206ENST00000477991 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
SCUBE1-206ENST00000477991 ARID4BQ4LE39 1312 aaPredicted RBP17.12■□□□□ 0.33
SCUBE1-206ENST00000477991 EFCAB2Q5VUJ9 269 aa17.1■□□□□ 0.33
SCUBE1-206ENST00000477991 ATP1B4Q9UN42 357 aaPredicted RBP17.1■□□□□ 0.33
SCUBE1-206ENST00000477991 RIMS1Q86UR5 1692 aaKnown RBP17.09■□□□□ 0.33
SCUBE1-206ENST00000477991 CASKIN1Q8WXD9 1431 aa17.07■□□□□ 0.32
SCUBE1-206ENST00000477991 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
SCUBE1-206ENST00000477991 CLIP1P30622 1438 aa17.06■□□□□ 0.32
SCUBE1-206ENST00000477991 CDC42BPBQ9Y5S2 1711 aa17.06■□□□□ 0.32
SCUBE1-206ENST00000477991 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
SCUBE1-206ENST00000477991 KDM5CP41229 1560 aa17.05■□□□□ 0.32
SCUBE1-206ENST00000477991 ATP10AO60312 1499 aa17.05■□□□□ 0.32
SCUBE1-206ENST00000477991 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
SCUBE1-206ENST00000477991 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
SCUBE1-206ENST00000477991 ZNF518AQ6AHZ1 1483 aa17.04■□□□□ 0.32
SCUBE1-206ENST00000477991 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
SCUBE1-206ENST00000477991 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.31
SCUBE1-206ENST00000477991 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
SCUBE1-206ENST00000477991 PREX2Q70Z35 1606 aa17.01■□□□□ 0.31
SCUBE1-206ENST00000477991 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
SCUBE1-206ENST00000477991 REREQ9P2R6 1566 aa16.98■□□□□ 0.31
SCUBE1-206ENST00000477991 AFAP1Q8N556 730 aa16.98■□□□□ 0.31
SCUBE1-206ENST00000477991 CDC42BPAQ5VT25 1732 aa16.98■□□□□ 0.31
SCUBE1-206ENST00000477991 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
SCUBE1-206ENST00000477991 ABCC1P33527 1531 aa16.97■□□□□ 0.31
SCUBE1-206ENST00000477991 DIP2CQ9Y2E4 1556 aa16.97■□□□□ 0.31
SCUBE1-206ENST00000477991 ITSN2Q9NZM3 1697 aa16.96■□□□□ 0.31
SCUBE1-206ENST00000477991 MLECQ14165 292 aa16.95■□□□□ 0.3
SCUBE1-206ENST00000477991 ABCA6Q8N139 1617 aa16.94■□□□□ 0.3
SCUBE1-206ENST00000477991 TRAPPC8Q9Y2L5 1435 aa16.94■□□□□ 0.3
SCUBE1-206ENST00000477991 AGLP35573 1532 aa16.91■□□□□ 0.3
SCUBE1-206ENST00000477991 KIDINS220Q9ULH0 1771 aa16.91■□□□□ 0.3
SCUBE1-206ENST00000477991 GPATCH8Q9UKJ3 1502 aaKnown RBP16.9■□□□□ 0.3
SCUBE1-206ENST00000477991 SETD1BQ9UPS6 1966 aaKnown RBP16.89■□□□□ 0.3
SCUBE1-206ENST00000477991 HSPA2P54652 639 aa16.89■□□□□ 0.29
SCUBE1-206ENST00000477991 SAMD9LQ8IVG5 1584 aa16.89■□□□□ 0.29
SCUBE1-206ENST00000477991 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
SCUBE1-206ENST00000477991 FBXO41Q8TF61 875 aa16.88■□□□□ 0.29
SCUBE1-206ENST00000477991 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
SCUBE1-206ENST00000477991 CEBPAP49715 358 aaPredicted RBP16.85■□□□□ 0.29
SCUBE1-206ENST00000477991 KIAA1107Q9UPP5 1409 aa16.85■□□□□ 0.29
SCUBE1-206ENST00000477991 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
SCUBE1-206ENST00000477991 C3P01024 1663 aa16.83■□□□□ 0.28
SCUBE1-206ENST00000477991 SYCP2Q9BX26 1530 aa16.83■□□□□ 0.28
SCUBE1-206ENST00000477991 PLEKHH2Q8IVE3 1493 aa16.81■□□□□ 0.28
SCUBE1-206ENST00000477991 STRCQ7RTU9 1775 aa16.8■□□□□ 0.28
SCUBE1-206ENST00000477991 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
SCUBE1-206ENST00000477991 INO80Q9ULG1 1556 aaPredicted RBP16.79■□□□□ 0.28
SCUBE1-206ENST00000477991 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
SCUBE1-206ENST00000477991 CNTLNQ9NXG0 1405 aa16.79■□□□□ 0.28
SCUBE1-206ENST00000477991 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
SCUBE1-206ENST00000477991 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
SCUBE1-206ENST00000477991 HNRNPMP52272 730 aaKnown RBP eCLIP16.78■□□□□ 0.28
SCUBE1-206ENST00000477991 CFDP1Q9UEE9 299 aaPredicted RBP16.78■□□□□ 0.28
SCUBE1-206ENST00000477991 ATP7AQ04656 1500 aa16.78■□□□□ 0.28
SCUBE1-206ENST00000477991 PLXNC1O60486 1568 aa16.77■□□□□ 0.28
SCUBE1-206ENST00000477991 SPAG9O60271 1321 aaKnown RBP16.77■□□□□ 0.28
SCUBE1-206ENST00000477991 EHBP1L1Q8N3D4 1523 aa16.77■□□□□ 0.28
SCUBE1-206ENST00000477991 MROH2AA6NES4 1674 aa16.77■□□□□ 0.28
SCUBE1-206ENST00000477991 CEP162Q5TB80 1403 aa16.77■□□□□ 0.27
SCUBE1-206ENST00000477991 TIAM1Q13009 1591 aa16.77■□□□□ 0.27
SCUBE1-206ENST00000477991 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
SCUBE1-206ENST00000477991 MBD5Q9P267 1494 aa16.74■□□□□ 0.27
SCUBE1-206ENST00000477991 ESF1Q9H501 851 aaKnown RBP16.73■□□□□ 0.27
SCUBE1-206ENST00000477991 A2MP01023 1474 aa16.73■□□□□ 0.27
SCUBE1-206ENST00000477991 CERKQ8TCT0 537 aa16.72■□□□□ 0.27
SCUBE1-206ENST00000477991 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
SCUBE1-206ENST00000477991 NPATQ14207 1427 aa16.71■□□□□ 0.27
SCUBE1-206ENST00000477991 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
SCUBE1-206ENST00000477991 ZNF644Q9H582 1327 aaPredicted RBP16.7■□□□□ 0.26
SCUBE1-206ENST00000477991 ZMYM3Q14202 1370 aa16.7■□□□□ 0.26
SCUBE1-206ENST00000477991 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
SCUBE1-206ENST00000477991 PTPRTO14522 1441 aa16.69■□□□□ 0.26
SCUBE1-206ENST00000477991 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
SCUBE1-206ENST00000477991 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
SCUBE1-206ENST00000477991 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
SCUBE1-206ENST00000477991 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
SCUBE1-206ENST00000477991 DHX29Q7Z478 1369 aaKnown RBP16.64■□□□□ 0.25
SCUBE1-206ENST00000477991 PTPRKQ15262 1439 aa16.63■□□□□ 0.25
SCUBE1-206ENST00000477991 ZNF142P52746 1687 aaPredicted RBP16.63■□□□□ 0.25
SCUBE1-206ENST00000477991 CAMSAP2Q08AD1 1489 aa16.62■□□□□ 0.25
SCUBE1-206ENST00000477991 CCDC141Q6ZP82 1450 aa16.62■□□□□ 0.25
SCUBE1-206ENST00000477991 RSPH4AQ5TD94 716 aa16.62■□□□□ 0.25
SCUBE1-206ENST00000477991 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
SCUBE1-206ENST00000477991 CAMSAP1Q5T5Y3 1602 aa16.61■□□□□ 0.25
SCUBE1-206ENST00000477991 MYO3AQ8NEV4 1616 aa16.61■□□□□ 0.25
SCUBE1-206ENST00000477991 GGT6Q6P531 493 aa16.61■□□□□ 0.25
SCUBE1-206ENST00000477991 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
SCUBE1-206ENST00000477991 LTBP4Q8N2S1 1624 aa16.6■□□□□ 0.25
SCUBE1-206ENST00000477991 PLA2R1Q13018 1463 aa16.59■□□□□ 0.25
SCUBE1-206ENST00000477991 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
SCUBE1-206ENST00000477991 MAP3K1Q13233 1512 aa16.59■□□□□ 0.25
SCUBE1-206ENST00000477991 FAM135AQ9P2D6 1515 aa16.59■□□□□ 0.25
SCUBE1-206ENST00000477991 CEP170BQ9Y4F5 1589 aaPredicted RBP16.58■□□□□ 0.24
SCUBE1-206ENST00000477991 LOC105371045A0A1W2PR82 267 aa16.57■□□□□ 0.24
SCUBE1-206ENST00000477991 TCOF1Q13428 1488 aaKnown RBP16.55■□□□□ 0.24
SCUBE1-206ENST00000477991 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
SCUBE1-206ENST00000477991 MAST1Q9Y2H9 1570 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms