RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 EHBP1L1Q8N3D4 1523 aa35.57■■■■□ 3.29
SF1-214ENST00000477596 CDC42BPAQ5VT25 1732 aa35.57■■■■□ 3.29
SF1-214ENST00000477596 TIAM1Q13009 1591 aa35.56■■■■□ 3.28
SF1-214ENST00000477596 EFCAB2Q5VUJ9 269 aa35.54■■■■□ 3.28
SF1-214ENST00000477596 SCAPERQ9BY12 1400 aa35.52■■■■□ 3.28
SF1-214ENST00000477596 POGZQ7Z3K3 1410 aa35.48■■■■□ 3.27
SF1-214ENST00000477596 GPATCH8Q9UKJ3 1502 aaKnown RBP35.47■■■■□ 3.27
SF1-214ENST00000477596 ZMYM4Q5VZL5 1548 aa35.44■■■■□ 3.26
SF1-214ENST00000477596 ABCC1P33527 1531 aa35.42■■■■□ 3.26
SF1-214ENST00000477596 ARHGEF40Q8TER5 1519 aa35.42■■■■□ 3.26
SF1-214ENST00000477596 KDM4FA0A1W2PPD8 638 aa35.41■■■■□ 3.26
SF1-214ENST00000477596 CCNB3Q8WWL7 1395 aa35.4■■■■□ 3.26
SF1-214ENST00000477596 SAMD9LQ8IVG5 1584 aa35.38■■■■□ 3.25
SF1-214ENST00000477596 ARHGEF12Q9NZN5 1544 aa35.38■■■■□ 3.25
SF1-214ENST00000477596 LRRC9Q6ZRR7 1453 aa35.38■■■■□ 3.25
SF1-214ENST00000477596 SUPT6HQ7KZ85 1726 aaKnown RBP35.37■■■■□ 3.25
SF1-214ENST00000477596 MAP3K1Q13233 1512 aa35.37■■■■□ 3.25
SF1-214ENST00000477596 ITSN2Q9NZM3 1697 aa35.37■■■■□ 3.25
SF1-214ENST00000477596 NCOA2Q15596 1464 aa35.36■■■■□ 3.25
SF1-214ENST00000477596 YEATS2Q9ULM3 1422 aa35.35■■■■□ 3.25
SF1-214ENST00000477596 ZFYVE16Q7Z3T8 1539 aa35.34■■■■□ 3.25
SF1-214ENST00000477596 KANK4Q5T7N3 995 aaPredicted RBP35.33■■■■□ 3.25
SF1-214ENST00000477596 ZNF777Q9ULD5 760 aaPredicted RBP35.33■■■■□ 3.25
SF1-214ENST00000477596 ZNF518AQ6AHZ1 1483 aa35.32■■■■□ 3.24
SF1-214ENST00000477596 KDM5CP41229 1560 aa35.31■■■■□ 3.24
SF1-214ENST00000477596 AEBP2Q6ZN18 517 aaPredicted RBP35.31■■■■□ 3.24
SF1-214ENST00000477596 TRAPPC8Q9Y2L5 1435 aa35.31■■■■□ 3.24
SF1-214ENST00000477596 SYCP2Q9BX26 1530 aa35.3■■■■□ 3.24
SF1-214ENST00000477596 AFAP1Q8N556 730 aa35.29■■■■□ 3.24
SF1-214ENST00000477596 CFDP1Q9UEE9 299 aaPredicted RBP35.29■■■■□ 3.24
SF1-214ENST00000477596 MAGI2Q86UL8 1455 aa35.27■■■■□ 3.24
SF1-214ENST00000477596 SIGLEC1Q9BZZ2 1709 aa35.24■■■■□ 3.23
SF1-214ENST00000477596 HECW2Q9P2P5 1572 aa35.23■■■■□ 3.23
SF1-214ENST00000477596 ZNF644Q9H582 1327 aaPredicted RBP35.2■■■■□ 3.23
SF1-214ENST00000477596 HNRNPMP52272 730 aaKnown RBP eCLIP35.17■■■■□ 3.22
SF1-214ENST00000477596 PLEKHH2Q8IVE3 1493 aa35.16■■■■□ 3.22
SF1-214ENST00000477596 APLP2Q06481 763 aa35.16■■■■□ 3.22
SF1-214ENST00000477596 KIAA1107Q9UPP5 1409 aa35.15■■■■□ 3.22
SF1-214ENST00000477596 ABCA6Q8N139 1617 aa35.15■■■■□ 3.22
SF1-214ENST00000477596 DIP2CQ9Y2E4 1556 aa35.15■■■■□ 3.22
SF1-214ENST00000477596 MLH3Q9UHC1 1453 aa35.14■■■■□ 3.22
SF1-214ENST00000477596 ARID4BQ4LE39 1312 aaPredicted RBP35.13■■■■□ 3.21
SF1-214ENST00000477596 BCORL1Q5H9F3 1711 aa35.13■■■■□ 3.21
SF1-214ENST00000477596 ATP10AO60312 1499 aa35.11■■■■□ 3.21
SF1-214ENST00000477596 CAMSAP2Q08AD1 1489 aa35.11■■■■□ 3.21
SF1-214ENST00000477596 KIDINS220Q9ULH0 1771 aa35.11■■■■□ 3.21
SF1-214ENST00000477596 MYT1LQ9UL68 1186 aa35.11■■■■□ 3.21
SF1-214ENST00000477596 C9orf84Q5VXU9 1444 aa35.1■■■■□ 3.21
SF1-214ENST00000477596 ADAMTSL3P82987 1691 aa35.09■■■■□ 3.21
SF1-214ENST00000477596 MBD5Q9P267 1494 aa35.07■■■■□ 3.2
SF1-214ENST00000477596 MYOM3Q5VTT5 1437 aa35.04■■■■□ 3.2
SF1-214ENST00000477596 INO80Q9ULG1 1556 aaPredicted RBP35.04■■■■□ 3.2
SF1-214ENST00000477596 MADDQ8WXG6 1647 aa35.03■■■■□ 3.2
SF1-214ENST00000477596 SPAG9O60271 1321 aaKnown RBP35.02■■■■□ 3.2
SF1-214ENST00000477596 ATP7AQ04656 1500 aa35.01■■■■□ 3.2
SF1-214ENST00000477596 REREQ9P2R6 1566 aa34.99■■■■□ 3.19
SF1-214ENST00000477596 MLECQ14165 292 aa34.95■■■■□ 3.19
SF1-214ENST00000477596 CCDC141Q6ZP82 1450 aa34.95■■■■□ 3.19
SF1-214ENST00000477596 MIA2Q96PC5 1412 aa34.93■■■■□ 3.18
SF1-214ENST00000477596 RIMS1Q86UR5 1692 aaKnown RBP34.92■■■■□ 3.18
SF1-214ENST00000477596 ARHGEF5Q12774 1597 aa34.91■■■■□ 3.18
SF1-214ENST00000477596 PTPRMP28827 1452 aa34.9■■■■□ 3.18
SF1-214ENST00000477596 FER1L4A9Z1Z3 1794 aa34.87■■■■□ 3.17
SF1-214ENST00000477596 AGLP35573 1532 aa34.86■■■■□ 3.17
SF1-214ENST00000477596 PTPN23Q9H3S7 1636 aa34.86■■■■□ 3.17
SF1-214ENST00000477596 PLXNC1O60486 1568 aa34.83■■■■□ 3.17
SF1-214ENST00000477596 FGD6Q6ZV73 1430 aa34.83■■■■□ 3.17
SF1-214ENST00000477596 RTEL1-TNFRSF6BF6WH68 1400 aa34.81■■■■□ 3.16
SF1-214ENST00000477596 A2MP01023 1474 aa34.81■■■■□ 3.16
SF1-214ENST00000477596 ADGBQ8N7X0 1667 aa34.81■■■■□ 3.16
SF1-214ENST00000477596 RSPH4AQ5TD94 716 aa34.77■■■■□ 3.16
SF1-214ENST00000477596 TCOF1Q13428 1488 aaKnown RBP34.76■■■■□ 3.15
SF1-214ENST00000477596 PPARGC1BQ86YN6 1023 aaKnown RBP34.75■■■■□ 3.15
SF1-214ENST00000477596 MAST1Q9Y2H9 1570 aa34.74■■■■□ 3.15
SF1-214ENST00000477596 CROCC2H7BZ55 1655 aa34.71■■■■□ 3.15
SF1-214ENST00000477596 PLPPR3Q6T4P5 718 aa34.71■■■■□ 3.15
SF1-214ENST00000477596 TSPY4P0CV99 314 aa34.69■■■■□ 3.14
SF1-214ENST00000477596 TSPY10P0CW01 314 aa34.69■■■■□ 3.14
SF1-214ENST00000477596 ABCC5O15440 1437 aa34.68■■■■□ 3.14
SF1-214ENST00000477596 DNMT1P26358 1616 aaKnown RBP34.67■■■■□ 3.14
SF1-214ENST00000477596 DAPK1P53355 1430 aa34.64■■■■□ 3.14
SF1-214ENST00000477596 DHX29Q7Z478 1369 aaKnown RBP34.64■■■■□ 3.14
SF1-214ENST00000477596 SHANK2Q9UPX8 1470 aa34.62■■■■□ 3.13
SF1-214ENST00000477596 CEBPAP49715 358 aaPredicted RBP34.58■■■■□ 3.13
SF1-214ENST00000477596 FAM50AQ14320 339 aaKnown RBP34.57■■■■□ 3.12
SF1-214ENST00000477596 C3P01024 1663 aa34.56■■■■□ 3.12
SF1-214ENST00000477596 GGT6Q6P531 493 aa34.55■■■■□ 3.12
SF1-214ENST00000477596 CLTCQ00610 1675 aaKnown RBP34.54■■■■□ 3.12
SF1-214ENST00000477596 KIF3BO15066 747 aa34.52■■■■□ 3.12
SF1-214ENST00000477596 ESF1Q9H501 851 aaKnown RBP34.52■■■■□ 3.12
SF1-214ENST00000477596 CNTLNQ9NXG0 1405 aa34.51■■■■□ 3.12
SF1-214ENST00000477596 MROH2AA6NES4 1674 aa34.49■■■■□ 3.11
SF1-214ENST00000477596 KIF15Q9NS87 1388 aa34.49■■■■□ 3.11
SF1-214ENST00000477596 CHIC2Q9UKJ5 165 aa34.48■■■■□ 3.11
SF1-214ENST00000477596 LMTK3Q96Q04 1460 aa34.47■■■■□ 3.11
SF1-214ENST00000477596 DUOX2Q9NRD8 1548 aa34.47■■■■□ 3.11
SF1-214ENST00000477596 EIF2AK4Q9P2K8 1649 aaKnown RBP34.44■■■■□ 3.1
SF1-214ENST00000477596 RRP7BPQ9NSQ0 103 aa34.44■■■■□ 3.1
SF1-214ENST00000477596 RNF17Q9BXT8 1623 aaKnown RBP34.43■■■■□ 3.1
SF1-214ENST00000477596 PTPRKQ15262 1439 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms