RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 TMEM121BQ9BXQ6 578 aaPredicted RBP8.05□□□□□ -1.12
TARDBP-208ENST00000477447 LHX8Q68G74 356 aa8.04□□□□□ -1.12
TARDBP-208ENST00000477447 C3orf67Q6ZVT6 689 aa8.03□□□□□ -1.12
TARDBP-208ENST00000477447 TMC2Q8TDI7 906 aa8.03□□□□□ -1.12
TARDBP-208ENST00000477447 DDX27Q96GQ7 796 aaKnown RBP8.03□□□□□ -1.12
TARDBP-208ENST00000477447 MFSD10Q14728 455 aa8.01□□□□□ -1.13
TARDBP-208ENST00000477447 P3H3Q8IVL6 736 aa8.01□□□□□ -1.13
TARDBP-208ENST00000477447 BCANQ96GW7 911 aa8.01□□□□□ -1.13
TARDBP-208ENST00000477447 PPP1R15BQ5SWA1 713 aa8□□□□□ -1.13
TARDBP-208ENST00000477447 KCNV2Q8TDN2 545 aa8□□□□□ -1.13
TARDBP-208ENST00000477447 GPHNQ9NQX3 736 aaPredicted RBP8□□□□□ -1.13
TARDBP-208ENST00000477447 C2orf72A6NCS6 295 aa7.99□□□□□ -1.13
TARDBP-208ENST00000477447 NBR1Q14596 966 aa7.98□□□□□ -1.13
TARDBP-208ENST00000477447 E2F4Q16254 413 aa7.98□□□□□ -1.13
TARDBP-208ENST00000477447 TMEM92Q6UXU6 159 aa7.98□□□□□ -1.13
TARDBP-208ENST00000477447 DSG2Q14126 1118 aa7.97□□□□□ -1.13
TARDBP-208ENST00000477447 KIF3CO14782 793 aa7.96□□□□□ -1.14
TARDBP-208ENST00000477447 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.96□□□□□ -1.14
TARDBP-208ENST00000477447 FOXK1P85037 733 aa7.95□□□□□ -1.14
TARDBP-208ENST00000477447 POTEB2H3BUK9 544 aa7.94□□□□□ -1.14
TARDBP-208ENST00000477447 PLPP6Q8IY26 295 aa7.94□□□□□ -1.14
TARDBP-208ENST00000477447 POTEJP0CG39 1038 aa7.93□□□□□ -1.14
TARDBP-208ENST00000477447 CAMK2BQ13554 666 aa7.92□□□□□ -1.14
TARDBP-208ENST00000477447 PLSCR2Q9NRY7 297 aa7.92□□□□□ -1.14
TARDBP-208ENST00000477447 ARHGEF1Q92888 912 aaKnown RBP7.9□□□□□ -1.14
TARDBP-208ENST00000477447 SCUBE2Q9NQ36 999 aa7.9□□□□□ -1.14
TARDBP-208ENST00000477447 EMILIN3Q9NT22 766 aa7.89□□□□□ -1.15
TARDBP-208ENST00000477447 MAMSTRQ6ZN01 415 aa7.88□□□□□ -1.15
TARDBP-208ENST00000477447 DPYSL4O14531 572 aa7.87□□□□□ -1.15
TARDBP-208ENST00000477447 SLAIN1Q8ND83 568 aa7.87□□□□□ -1.15
TARDBP-208ENST00000477447 UPF1Q92900 1129 aaKnown RBP eCLIP7.87□□□□□ -1.152e-11■■■□□ 15.1
TARDBP-208ENST00000477447 ARIH1Q9Y4X5 557 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-208ENST00000477447 SEMA3EO15041 775 aa7.82□□□□□ -1.16
TARDBP-208ENST00000477447 MAP3K9P80192 1104 aa7.82□□□□□ -1.16
TARDBP-208ENST00000477447 OXER1Q8TDS5 423 aa7.82□□□□□ -1.16
TARDBP-208ENST00000477447 PDIA6Q15084 440 aa7.81□□□□□ -1.16
TARDBP-208ENST00000477447 TESPA1A2RU30 521 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-208ENST00000477447 SPDYE16A6NNV3 312 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-208ENST00000477447 SLC34A2O95436 690 aa7.79□□□□□ -1.16
TARDBP-208ENST00000477447 OTUD5Q96G74 571 aa7.79□□□□□ -1.16
TARDBP-208ENST00000477447 ZNF316A6NFI3 1004 aaPredicted RBP7.78□□□□□ -1.16
TARDBP-208ENST00000477447 TULP1O00294 542 aaPredicted RBP7.78□□□□□ -1.16
TARDBP-208ENST00000477447 TBC1D12O60347 775 aa7.78□□□□□ -1.16
TARDBP-208ENST00000477447 DOK7Q18PE1 504 aa7.78□□□□□ -1.16
TARDBP-208ENST00000477447 PTCD2Q8WV60 388 aaKnown RBP7.78□□□□□ -1.16
TARDBP-208ENST00000477447 HOXB3P14651 431 aaPredicted RBP7.76□□□□□ -1.17
TARDBP-208ENST00000477447 MLLT3P42568 568 aaPredicted RBP7.76□□□□□ -1.17
TARDBP-208ENST00000477447 PCDHGA4Q9Y5G9 962 aa7.76□□□□□ -1.17
TARDBP-208ENST00000477447 RIMBP2O15034 1052 aa7.75□□□□□ -1.17
TARDBP-208ENST00000477447 EVI5O60447 810 aa7.75□□□□□ -1.17
TARDBP-208ENST00000477447 LMOD2Q6P5Q4 547 aa7.75□□□□□ -1.17
TARDBP-208ENST00000477447 TPRNQ4KMQ1 711 aa7.74□□□□□ -1.17
TARDBP-208ENST00000477447 SMYD5Q6GMV2 418 aa7.74□□□□□ -1.17
TARDBP-208ENST00000477447 ZNF710Q8N1W2 664 aa7.74□□□□□ -1.17
TARDBP-208ENST00000477447 GRXCR2A6NFK2 248 aa7.73□□□□□ -1.17
TARDBP-208ENST00000477447 SNPHO15079 494 aa7.72□□□□□ -1.17
TARDBP-208ENST00000477447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.72□□□□□ -1.17
TARDBP-208ENST00000477447 DDX12PQ92771 950 aa7.72□□□□□ -1.17
TARDBP-208ENST00000477447 ARSIQ5FYB1 569 aa7.71□□□□□ -1.18
TARDBP-208ENST00000477447 KHSRPQ92945 711 aaKnown RBP eCLIP7.71□□□□□ -1.183e-10■■■■□ 22.7
TARDBP-208ENST00000477447 ZSWIM6Q9HCJ5 1215 aa7.71□□□□□ -1.18
TARDBP-208ENST00000477447 NUDT7P0C024 238 aa7.7□□□□□ -1.18
TARDBP-208ENST00000477447 PRKCSHP14314 528 aaPredicted RBP7.7□□□□□ -1.18
TARDBP-208ENST00000477447 PTGER2P43116 358 aa7.68□□□□□ -1.18
TARDBP-208ENST00000477447 RBM26Q5T8P6 1007 aaKnown RBP7.68□□□□□ -1.18
TARDBP-208ENST00000477447 GPR153Q6NV75 609 aa7.68□□□□□ -1.18
TARDBP-208ENST00000477447 ANO8Q9HCE9 1232 aaPredicted RBP7.67□□□□□ -1.18
TARDBP-208ENST00000477447 KDM4FA0A1W2PPD8 638 aa7.66□□□□□ -1.18
TARDBP-208ENST00000477447 GPIHBP1Q8IV16 184 aa7.65□□□□□ -1.18
TARDBP-208ENST00000477447 PHF14O94880 888 aa7.64□□□□□ -1.19
TARDBP-208ENST00000477447 HOXB1P14653 301 aaPredicted RBP7.64□□□□□ -1.19
TARDBP-208ENST00000477447 OSBPP22059 807 aa7.64□□□□□ -1.19
TARDBP-208ENST00000477447 JPH4Q96JJ6 628 aa7.64□□□□□ -1.19
TARDBP-208ENST00000477447 ZNF454Q8N9F8 522 aa7.63□□□□□ -1.19
TARDBP-208ENST00000477447 EPAS1Q99814 870 aa7.63□□□□□ -1.19
TARDBP-208ENST00000477447 LHX6Q9UPM6 363 aa7.63□□□□□ -1.19
TARDBP-208ENST00000477447 PCDHGA10Q9Y5H3 936 aa7.63□□□□□ -1.19
TARDBP-208ENST00000477447 NUTM2FA1L443 756 aa7.62□□□□□ -1.19
TARDBP-208ENST00000477447 PRIM1P49642 420 aaKnown RBP7.62□□□□□ -1.19
TARDBP-208ENST00000477447 TYW1BQ6NUM6 668 aa7.62□□□□□ -1.19
TARDBP-208ENST00000477447 ZC3H15Q8WU90 426 aaKnown RBP7.62□□□□□ -1.19
TARDBP-208ENST00000477447 RBM33Q96EV2 1170 aaKnown RBP7.62□□□□□ -1.19
TARDBP-208ENST00000477447 POTEMA6NI47 508 aa7.61□□□□□ -1.19
TARDBP-208ENST00000477447 MAP3K7O43318 606 aa7.61□□□□□ -1.19
TARDBP-208ENST00000477447 FOSBP53539 338 aa7.61□□□□□ -1.19
TARDBP-208ENST00000477447 EN1Q05925 392 aaPredicted RBP7.61□□□□□ -1.19
TARDBP-208ENST00000477447 FBXW7Q969H0 707 aa7.6□□□□□ -1.19
TARDBP-208ENST00000477447 ST18O60284 1047 aa7.59□□□□□ -1.19
TARDBP-208ENST00000477447 ZDHHC16Q969W1 377 aa7.59□□□□□ -1.19
TARDBP-208ENST00000477447 PSDA5PKW4 1024 aaPredicted RBP7.58□□□□□ -1.2
TARDBP-208ENST00000477447 TSR1Q2NL82 804 aaKnown RBP7.58□□□□□ -1.2
TARDBP-208ENST00000477447 PPP4R3BQ5MIZ7 849 aa7.58□□□□□ -1.2
TARDBP-208ENST00000477447 POTEGQ6S5H5 508 aa7.58□□□□□ -1.2
TARDBP-208ENST00000477447 FAM163AQ96GL9 167 aaPredicted RBP7.58□□□□□ -1.2
TARDBP-208ENST00000477447 CDHR5Q9HBB8 845 aa7.58□□□□□ -1.2
TARDBP-208ENST00000477447 GPR37O15354 613 aa7.57□□□□□ -1.2
TARDBP-208ENST00000477447 FCHSD2O94868 740 aa7.56□□□□□ -1.2
TARDBP-208ENST00000477447 EMP3P54852 163 aa7.56□□□□□ -1.2
TARDBP-208ENST00000477447 MARVELD3Q96A59 401 aa7.56□□□□□ -1.2
TARDBP-208ENST00000477447 ADAM33Q9BZ11 813 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms