RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 TMC2Q8TDI7 906 aa9.33□□□□□ -0.92
RPL39-203ENST00000477403 POTEMA6NI47 508 aa9.32□□□□□ -0.92
RPL39-203ENST00000477403 POTEGQ6S5H5 508 aa9.32□□□□□ -0.92
RPL39-203ENST00000477403 HOXB3P14651 431 aaPredicted RBP9.31□□□□□ -0.92
RPL39-203ENST00000477403 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.31□□□□□ -0.92
RPL39-203ENST00000477403 KIF3CO14782 793 aa9.3□□□□□ -0.92
RPL39-203ENST00000477403 DOK7Q18PE1 504 aa9.3□□□□□ -0.92
RPL39-203ENST00000477403 ZNF710Q8N1W2 664 aa9.3□□□□□ -0.92
RPL39-203ENST00000477403 RIMBP2O15034 1052 aa9.27□□□□□ -0.93
RPL39-203ENST00000477403 SPRYD3Q8NCJ5 442 aa9.26□□□□□ -0.93
RPL39-203ENST00000477403 MARVELD3Q96A59 401 aa9.26□□□□□ -0.93
RPL39-203ENST00000477403 CFAP44Q96MT7 982 aa9.26□□□□□ -0.93
RPL39-203ENST00000477403 PAXIP1Q6ZW49 1069 aaPredicted RBP9.25□□□□□ -0.93
RPL39-203ENST00000477403 GPHNQ9NQX3 736 aaPredicted RBP9.24□□□□□ -0.93
RPL39-203ENST00000477403 EMP3P54852 163 aa9.22□□□□□ -0.93
RPL39-203ENST00000477403 FOXK1P85037 733 aa9.21□□□□□ -0.94
RPL39-203ENST00000477403 DSG2Q14126 1118 aa9.21□□□□□ -0.94
RPL39-203ENST00000477403 PLPP6Q8IY26 295 aa9.21□□□□□ -0.94
RPL39-203ENST00000477403 HOXB1P14653 301 aaPredicted RBP9.2□□□□□ -0.94
RPL39-203ENST00000477403 PDE4AP27815 886 aa9.2□□□□□ -0.94
RPL39-203ENST00000477403 CRISPLD2Q9H0B8 497 aa9.2□□□□□ -0.94
RPL39-203ENST00000477403 ZSWIM6Q9HCJ5 1215 aa9.2□□□□□ -0.94
RPL39-203ENST00000477403 CADPS2Q86UW7 1296 aa9.19□□□□□ -0.94
RPL39-203ENST00000477403 NCKAP5LQ9HCH0 1330 aa9.19□□□□□ -0.94
RPL39-203ENST00000477403 ARSIQ5FYB1 569 aa9.18□□□□□ -0.94
RPL39-203ENST00000477403 GPR153Q6NV75 609 aa9.18□□□□□ -0.94
RPL39-203ENST00000477403 FAM205CA6NFA0 338 aa9.17□□□□□ -0.94
RPL39-203ENST00000477403 KHSRPQ92945 711 aaKnown RBP eCLIP9.17□□□□□ -0.94
RPL39-203ENST00000477403 LARP6Q9BRS8 491 aaKnown RBP9.17□□□□□ -0.94
RPL39-203ENST00000477403 PPP1R15BQ5SWA1 713 aa9.16□□□□□ -0.94
RPL39-203ENST00000477403 SLC34A2O95436 690 aa9.15□□□□□ -0.94
RPL39-203ENST00000477403 ERBB3P21860 1342 aa9.14□□□□□ -0.95
RPL39-203ENST00000477403 CDAN1Q8IWY9 1227 aa9.14□□□□□ -0.95
RPL39-203ENST00000477403 DDX27Q96GQ7 796 aaKnown RBP9.14□□□□□ -0.95
RPL39-203ENST00000477403 PCDHGA4Q9Y5G9 962 aa9.14□□□□□ -0.95
RPL39-203ENST00000477403 HS3ST6Q96QI5 342 aa9.13□□□□□ -0.95
RPL39-203ENST00000477403 NUDT7P0C024 238 aa9.12□□□□□ -0.95
RPL39-203ENST00000477403 UPF1Q92900 1129 aaKnown RBP eCLIP9.11□□□□□ -0.95
RPL39-203ENST00000477403 PCDH10Q9P2E7 1040 aa9.11□□□□□ -0.95
RPL39-203ENST00000477403 POTEB3A0JP26 581 aa9.1□□□□□ -0.95
RPL39-203ENST00000477403 MFSD10Q14728 455 aa9.1□□□□□ -0.95
RPL39-203ENST00000477403 VARS2Q5ST30 1063 aaKnown RBP9.1□□□□□ -0.95
RPL39-203ENST00000477403 POTEBQ6S5H4 581 aa9.1□□□□□ -0.95
RPL39-203ENST00000477403 PTCD2Q8WV60 388 aaKnown RBP9.1□□□□□ -0.95
RPL39-203ENST00000477403 TBC1D12O60347 775 aa9.08□□□□□ -0.96
RPL39-203ENST00000477403 ZNF316A6NFI3 1004 aaPredicted RBP9.07□□□□□ -0.96
RPL39-203ENST00000477403 OXER1Q8TDS5 423 aa9.06□□□□□ -0.96
RPL39-203ENST00000477403 LHX6Q9UPM6 363 aa9.05□□□□□ -0.96
RPL39-203ENST00000477403 TSHZ2Q9NRE2 1034 aa9.03□□□□□ -0.96
RPL39-203ENST00000477403 EMILIN3Q9NT22 766 aa9.02□□□□□ -0.97
RPL39-203ENST00000477403 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
RPL39-203ENST00000477403 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
RPL39-203ENST00000477403 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
RPL39-203ENST00000477403 KDM4FA0A1W2PPD8 638 aa9□□□□□ -0.97
RPL39-203ENST00000477403 PLCB2Q00722 1185 aa9□□□□□ -0.97
RPL39-203ENST00000477403 ZNF687Q8N1G0 1237 aa9□□□□□ -0.97
RPL39-203ENST00000477403 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
RPL39-203ENST00000477403 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
RPL39-203ENST00000477403 EVI5O60447 810 aa8.98□□□□□ -0.97
RPL39-203ENST00000477403 CAMK2BQ13554 666 aa8.98□□□□□ -0.97
RPL39-203ENST00000477403 PSDA5PKW4 1024 aaPredicted RBP8.96□□□□□ -0.98
RPL39-203ENST00000477403 DPYSL4O14531 572 aa8.95□□□□□ -0.98
RPL39-203ENST00000477403 E2F4Q16254 413 aa8.94□□□□□ -0.98
RPL39-203ENST00000477403 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
RPL39-203ENST00000477403 ZNF454Q8N9F8 522 aa8.93□□□□□ -0.98
RPL39-203ENST00000477403 AXIN2Q9Y2T1 843 aa8.92□□□□□ -0.98
RPL39-203ENST00000477403 HAP1P54257 671 aaPredicted RBP8.91□□□□□ -0.98
RPL39-203ENST00000477403 ANO8Q9HCE9 1232 aaPredicted RBP8.91□□□□□ -0.98
RPL39-203ENST00000477403 PBX2P40425 430 aa8.89□□□□□ -0.99
RPL39-203ENST00000477403 POTEEQ6S8J3 1075 aa8.89□□□□□ -0.99
RPL39-203ENST00000477403 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
RPL39-203ENST00000477403 FOSBP53539 338 aa8.88□□□□□ -0.99
RPL39-203ENST00000477403 ANKRD13DQ6ZTN6 518 aa8.88□□□□□ -0.99
RPL39-203ENST00000477403 JPH4Q96JJ6 628 aa8.88□□□□□ -0.99
RPL39-203ENST00000477403 ARHGAP33O14559 1287 aa8.87□□□□□ -0.99
RPL39-203ENST00000477403 LSM11P83369 360 aaKnown RBP eCLIP8.87□□□□□ -0.99
RPL39-203ENST00000477403 PSEN2P49810 448 aa8.86□□□□□ -0.99
RPL39-203ENST00000477403 ZDHHC16Q969W1 377 aa8.85□□□□□ -0.99
RPL39-203ENST00000477403 KCNH8Q96L42 1107 aa8.85□□□□□ -0.99
RPL39-203ENST00000477403 KCNK17Q96T54 332 aa8.85□□□□□ -0.99
RPL39-203ENST00000477403 PDIA6Q15084 440 aa8.84□□□□□ -0.99
RPL39-203ENST00000477403 DDX12PQ92771 950 aa8.84□□□□□ -0.99
RPL39-203ENST00000477403 PCDHGA10Q9Y5H3 936 aa8.84□□□□□ -0.99
RPL39-203ENST00000477403 SPDYE16A6NNV3 312 aaPredicted RBP8.83□□□□□ -1
RPL39-203ENST00000477403 MMRN1Q13201 1228 aa8.83□□□□□ -1
RPL39-203ENST00000477403 ADAM33Q9BZ11 813 aa8.83□□□□□ -1
RPL39-203ENST00000477403 BCL2L12Q9HB09 334 aa8.83□□□□□ -1
RPL39-203ENST00000477403 NISCHQ9Y2I1 1504 aa8.82□□□□□ -1
RPL39-203ENST00000477403 PHF14O94880 888 aa8.82□□□□□ -1
RPL39-203ENST00000477403 DMRTA1Q5VZB9 504 aa8.82□□□□□ -1
RPL39-203ENST00000477403 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
RPL39-203ENST00000477403 ARIH1Q9Y4X5 557 aaPredicted RBP8.82□□□□□ -1
RPL39-203ENST00000477403 PTPREP23469 700 aa8.81□□□□□ -1
RPL39-203ENST00000477403 TYW1BQ6NUM6 668 aa8.81□□□□□ -1
RPL39-203ENST00000477403 PTGER2P43116 358 aa8.8□□□□□ -1
RPL39-203ENST00000477403 FBXW7Q969H0 707 aa8.79□□□□□ -1
RPL39-203ENST00000477403 EPAS1Q99814 870 aa8.79□□□□□ -1
RPL39-203ENST00000477403 GRXCR2A6NFK2 248 aa8.78□□□□□ -1
RPL39-203ENST00000477403 NBR1Q14596 966 aa8.78□□□□□ -1
RPL39-203ENST00000477403 ADGRD1Q6QNK2 874 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms