RNA–Protein interactions for RNA: ENST00000477375.5

IMP4-215, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-215ENST00000477375 EHBP1L1Q8N3D4 1523 aa27.62■■■□□ 2.01
IMP4-215ENST00000477375 EFCAB2Q5VUJ9 269 aa27.58■■■□□ 2.01
IMP4-215ENST00000477375 DENND4BO75064 1496 aaPredicted RBP27.57■■■□□ 2
IMP4-215ENST00000477375 ADGRL1O94910 1474 aa27.57■■■□□ 2
IMP4-215ENST00000477375 GPATCH8Q9UKJ3 1502 aaKnown RBP27.56■■■□□ 2
IMP4-215ENST00000477375 SCAPERQ9BY12 1400 aa27.54■■■□□ 2
IMP4-215ENST00000477375 SUPT6HQ7KZ85 1726 aaKnown RBP27.53■■■□□ 2
IMP4-215ENST00000477375 MAP3K1Q13233 1512 aa27.52■■■□□ 2
IMP4-215ENST00000477375 KANK4Q5T7N3 995 aaPredicted RBP27.51■■□□□ 1.99
IMP4-215ENST00000477375 LRRC9Q6ZRR7 1453 aa27.51■■□□□ 1.99
IMP4-215ENST00000477375 ITSN2Q9NZM3 1697 aa27.49■■□□□ 1.99
IMP4-215ENST00000477375 SAMD9LQ8IVG5 1584 aa27.49■■□□□ 1.99
IMP4-215ENST00000477375 CCNB3Q8WWL7 1395 aa27.48■■□□□ 1.99
IMP4-215ENST00000477375 ABCC1P33527 1531 aa27.47■■□□□ 1.99
IMP4-215ENST00000477375 ARHGEF12Q9NZN5 1544 aa27.47■■□□□ 1.99
IMP4-215ENST00000477375 POGZQ7Z3K3 1410 aa27.47■■□□□ 1.99
IMP4-215ENST00000477375 NCOA2Q15596 1464 aa27.46■■□□□ 1.99
IMP4-215ENST00000477375 ZMYM4Q5VZL5 1548 aa27.46■■□□□ 1.99
IMP4-215ENST00000477375 ZNF777Q9ULD5 760 aaPredicted RBP27.43■■□□□ 1.98
IMP4-215ENST00000477375 KDM4FA0A1W2PPD8 638 aa27.41■■□□□ 1.98
IMP4-215ENST00000477375 ARHGEF40Q8TER5 1519 aa27.41■■□□□ 1.98
IMP4-215ENST00000477375 AFAP1Q8N556 730 aa27.4■■□□□ 1.98
IMP4-215ENST00000477375 CFDP1Q9UEE9 299 aaPredicted RBP27.4■■□□□ 1.98
IMP4-215ENST00000477375 TRAPPC8Q9Y2L5 1435 aa27.4■■□□□ 1.98
IMP4-215ENST00000477375 YEATS2Q9ULM3 1422 aa27.39■■□□□ 1.97
IMP4-215ENST00000477375 KDM5CP41229 1560 aa27.39■■□□□ 1.97
IMP4-215ENST00000477375 SIGLEC1Q9BZZ2 1709 aa27.38■■□□□ 1.97
IMP4-215ENST00000477375 SYCP2Q9BX26 1530 aa27.38■■□□□ 1.97
IMP4-215ENST00000477375 ZFYVE16Q7Z3T8 1539 aa27.37■■□□□ 1.97
IMP4-215ENST00000477375 ZNF518AQ6AHZ1 1483 aa27.37■■□□□ 1.97
IMP4-215ENST00000477375 ZNF644Q9H582 1327 aaPredicted RBP27.37■■□□□ 1.97
IMP4-215ENST00000477375 HNRNPMP52272 730 aaKnown RBP eCLIP27.34■■□□□ 1.97
IMP4-215ENST00000477375 APLP2Q06481 763 aa27.34■■□□□ 1.97
IMP4-215ENST00000477375 MAGI2Q86UL8 1455 aa27.32■■□□□ 1.96
IMP4-215ENST00000477375 HECW2Q9P2P5 1572 aa27.32■■□□□ 1.96
IMP4-215ENST00000477375 KIDINS220Q9ULH0 1771 aa27.31■■□□□ 1.96
IMP4-215ENST00000477375 ABCA6Q8N139 1617 aa27.28■■□□□ 1.96
IMP4-215ENST00000477375 KIAA1107Q9UPP5 1409 aa27.28■■□□□ 1.96
IMP4-215ENST00000477375 PLEKHH2Q8IVE3 1493 aa27.27■■□□□ 1.96
IMP4-215ENST00000477375 DIP2CQ9Y2E4 1556 aa27.26■■□□□ 1.96
IMP4-215ENST00000477375 CAMSAP2Q08AD1 1489 aa27.25■■□□□ 1.95
IMP4-215ENST00000477375 MLH3Q9UHC1 1453 aa27.25■■□□□ 1.95
IMP4-215ENST00000477375 BCORL1Q5H9F3 1711 aa27.25■■□□□ 1.95
IMP4-215ENST00000477375 MBD5Q9P267 1494 aa27.25■■□□□ 1.95
IMP4-215ENST00000477375 AEBP2Q6ZN18 517 aaPredicted RBP27.24■■□□□ 1.95
IMP4-215ENST00000477375 ATP10AO60312 1499 aa27.23■■□□□ 1.95
IMP4-215ENST00000477375 MYOM3Q5VTT5 1437 aa27.23■■□□□ 1.95
IMP4-215ENST00000477375 ADAMTSL3P82987 1691 aa27.22■■□□□ 1.95
IMP4-215ENST00000477375 MYT1LQ9UL68 1186 aa27.22■■□□□ 1.95
IMP4-215ENST00000477375 INO80Q9ULG1 1556 aaPredicted RBP27.2■■□□□ 1.94
IMP4-215ENST00000477375 ARID4BQ4LE39 1312 aaPredicted RBP27.19■■□□□ 1.94
IMP4-215ENST00000477375 C9orf84Q5VXU9 1444 aa27.17■■□□□ 1.94
IMP4-215ENST00000477375 ATP7AQ04656 1500 aa27.16■■□□□ 1.94
IMP4-215ENST00000477375 SPAG9O60271 1321 aaKnown RBP27.16■■□□□ 1.94
IMP4-215ENST00000477375 MIA2Q96PC5 1412 aa27.15■■□□□ 1.94
IMP4-215ENST00000477375 MADDQ8WXG6 1647 aa27.14■■□□□ 1.94
IMP4-215ENST00000477375 ARHGEF5Q12774 1597 aa27.14■■□□□ 1.93
IMP4-215ENST00000477375 PTPN23Q9H3S7 1636 aa27.13■■□□□ 1.93
IMP4-215ENST00000477375 REREQ9P2R6 1566 aa27.13■■□□□ 1.93
IMP4-215ENST00000477375 PPARGC1BQ86YN6 1023 aaKnown RBP27.11■■□□□ 1.93
IMP4-215ENST00000477375 CCDC141Q6ZP82 1450 aa27.11■■□□□ 1.93
IMP4-215ENST00000477375 RIMS1Q86UR5 1692 aaKnown RBP27.09■■□□□ 1.93
IMP4-215ENST00000477375 ADGBQ8N7X0 1667 aa27.09■■□□□ 1.93
IMP4-215ENST00000477375 MLECQ14165 292 aa27.09■■□□□ 1.93
IMP4-215ENST00000477375 FGD6Q6ZV73 1430 aa27.07■■□□□ 1.92
IMP4-215ENST00000477375 FER1L4A9Z1Z3 1794 aa27.07■■□□□ 1.92
IMP4-215ENST00000477375 AGLP35573 1532 aa27.03■■□□□ 1.92
IMP4-215ENST00000477375 CROCC2H7BZ55 1655 aa27.02■■□□□ 1.92
IMP4-215ENST00000477375 TCOF1Q13428 1488 aaKnown RBP27.02■■□□□ 1.92
IMP4-215ENST00000477375 RTEL1-TNFRSF6BF6WH68 1400 aa27.02■■□□□ 1.92
IMP4-215ENST00000477375 RSPH4AQ5TD94 716 aa27.02■■□□□ 1.92
IMP4-215ENST00000477375 PLXNC1O60486 1568 aa27.01■■□□□ 1.92
IMP4-215ENST00000477375 A2MP01023 1474 aa27■■□□□ 1.91
IMP4-215ENST00000477375 PTPRMP28827 1452 aa27■■□□□ 1.91
IMP4-215ENST00000477375 MAST1Q9Y2H9 1570 aa27■■□□□ 1.91
IMP4-215ENST00000477375 DNMT1P26358 1616 aaKnown RBP26.98■■□□□ 1.91
IMP4-215ENST00000477375 TSPY4P0CV99 314 aa26.95■■□□□ 1.9
IMP4-215ENST00000477375 TSPY10P0CW01 314 aa26.95■■□□□ 1.9
IMP4-215ENST00000477375 ABCC5O15440 1437 aa26.95■■□□□ 1.9
IMP4-215ENST00000477375 DAPK1P53355 1430 aa26.91■■□□□ 1.9
IMP4-215ENST00000477375 DHX29Q7Z478 1369 aaKnown RBP26.89■■□□□ 1.9
IMP4-215ENST00000477375 FAM50AQ14320 339 aaKnown RBP26.88■■□□□ 1.89
IMP4-215ENST00000477375 PLPPR3Q6T4P5 718 aa26.87■■□□□ 1.89
IMP4-215ENST00000477375 SHANK2Q9UPX8 1470 aa26.86■■□□□ 1.89
IMP4-215ENST00000477375 C3P01024 1663 aa26.85■■□□□ 1.89
IMP4-215ENST00000477375 CLTCQ00610 1675 aaKnown RBP26.84■■□□□ 1.89
IMP4-215ENST00000477375 CEBPAP49715 358 aaPredicted RBP26.82■■□□□ 1.88
IMP4-215ENST00000477375 GGT6Q6P531 493 aa26.81■■□□□ 1.88
IMP4-215ENST00000477375 CHIC2Q9UKJ5 165 aa26.81■■□□□ 1.88
IMP4-215ENST00000477375 KIF3BO15066 747 aa26.79■■□□□ 1.88
IMP4-215ENST00000477375 MROH2AA6NES4 1674 aa26.79■■□□□ 1.88
IMP4-215ENST00000477375 PTPRKQ15262 1439 aa26.77■■□□□ 1.88
IMP4-215ENST00000477375 RRP7BPQ9NSQ0 103 aa26.77■■□□□ 1.88
IMP4-215ENST00000477375 DUOX2Q9NRD8 1548 aa26.76■■□□□ 1.87
IMP4-215ENST00000477375 EIF2AK4Q9P2K8 1649 aaKnown RBP26.76■■□□□ 1.87
IMP4-215ENST00000477375 KIF15Q9NS87 1388 aa26.75■■□□□ 1.87
IMP4-215ENST00000477375 RNF17Q9BXT8 1623 aaKnown RBP26.74■■□□□ 1.87
IMP4-215ENST00000477375 ESF1Q9H501 851 aaKnown RBP26.73■■□□□ 1.87
IMP4-215ENST00000477375 SETD1BQ9UPS6 1966 aaKnown RBP26.73■■□□□ 1.87
IMP4-215ENST00000477375 ADGRL2O95490 1459 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms