RNA–Protein interactions for RNA: ENST00000477215.5

SYCP1-205, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-205ENST00000477215 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
SYCP1-205ENST00000477215 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
SYCP1-205ENST00000477215 SOX12O15370 315 aa12.29□□□□□ -0.44
SYCP1-205ENST00000477215 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.44
SYCP1-205ENST00000477215 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
SYCP1-205ENST00000477215 MS4A4AQ96JQ5 239 aa12.25□□□□□ -0.45
SYCP1-205ENST00000477215 PBX2P40425 430 aa12.24□□□□□ -0.45
SYCP1-205ENST00000477215 HCSTQ9UBK5 93 aa12.23□□□□□ -0.45
SYCP1-205ENST00000477215 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
SYCP1-205ENST00000477215 NUDT7P0C024 238 aa12.16□□□□□ -0.46
SYCP1-205ENST00000477215 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
SYCP1-205ENST00000477215 ECM2O94769 699 aaPredicted RBP12.15□□□□□ -0.46
SYCP1-205ENST00000477215 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
SYCP1-205ENST00000477215 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
SYCP1-205ENST00000477215 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
SYCP1-205ENST00000477215 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
SYCP1-205ENST00000477215 LHX6Q9UPM6 363 aa12.11□□□□□ -0.47
SYCP1-205ENST00000477215 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
SYCP1-205ENST00000477215 NLRP6P59044 892 aa12.1□□□□□ -0.47
SYCP1-205ENST00000477215 RNF25Q96BH1 459 aaPredicted RBP12.08□□□□□ -0.48
SYCP1-205ENST00000477215 ADGRD1Q6QNK2 874 aa12.07□□□□□ -0.48
SYCP1-205ENST00000477215 PKD2Q13563 968 aa12.06□□□□□ -0.48
SYCP1-205ENST00000477215 C2orf72A6NCS6 295 aa12.05□□□□□ -0.48
SYCP1-205ENST00000477215 PCDHGA4Q9Y5G9 962 aa12.04□□□□□ -0.48
SYCP1-205ENST00000477215 ARHGAP33O14559 1287 aa12.03□□□□□ -0.48
SYCP1-205ENST00000477215 KIF3CO14782 793 aa12.02□□□□□ -0.49
SYCP1-205ENST00000477215 FBXO22Q8NEZ5 403 aa12.01□□□□□ -0.49
SYCP1-205ENST00000477215 SLC34A2O95436 690 aa12□□□□□ -0.49
SYCP1-205ENST00000477215 PSDA5PKW4 1024 aaPredicted RBP11.99□□□□□ -0.49
SYCP1-205ENST00000477215 RGL2O15211 777 aa11.99□□□□□ -0.49
SYCP1-205ENST00000477215 TAOK2Q9UL54 1235 aa11.99□□□□□ -0.49
SYCP1-205ENST00000477215 TK2O00142 265 aa11.97□□□□□ -0.49
SYCP1-205ENST00000477215 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
SYCP1-205ENST00000477215 STAC3Q96MF2 364 aa11.95□□□□□ -0.5
SYCP1-205ENST00000477215 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
SYCP1-205ENST00000477215 HRO43593 1189 aa11.93□□□□□ -0.5
SYCP1-205ENST00000477215 TMC2Q8TDI7 906 aa11.93□□□□□ -0.5
SYCP1-205ENST00000477215 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
SYCP1-205ENST00000477215 STK25O00506 426 aa11.92□□□□□ -0.5
SYCP1-205ENST00000477215 DMRTA1Q5VZB9 504 aa11.91□□□□□ -0.5
SYCP1-205ENST00000477215 MFRPQ9BY79 579 aa11.91□□□□□ -0.5
SYCP1-205ENST00000477215 PSEN2P49810 448 aa11.9□□□□□ -0.5
SYCP1-205ENST00000477215 RGS20O76081 388 aa11.88□□□□□ -0.51
SYCP1-205ENST00000477215 IRX2Q9BZI1 471 aaPredicted RBP11.88□□□□□ -0.51
SYCP1-205ENST00000477215 PTPN5P54829 565 aa11.83□□□□□ -0.52
SYCP1-205ENST00000477215 DCAF8L2P0C7V8 631 aa11.82□□□□□ -0.52
SYCP1-205ENST00000477215 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
SYCP1-205ENST00000477215 KCNH8Q96L42 1107 aa11.81□□□□□ -0.52
SYCP1-205ENST00000477215 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
SYCP1-205ENST00000477215 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
SYCP1-205ENST00000477215 PTCD2Q8WV60 388 aaKnown RBP11.78□□□□□ -0.52
SYCP1-205ENST00000477215 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
SYCP1-205ENST00000477215 KCNK17Q96T54 332 aa11.76□□□□□ -0.53
SYCP1-205ENST00000477215 A0A0G2JS52 829 aa11.73□□□□□ -0.53
SYCP1-205ENST00000477215 VPS9D1Q9Y2B5 631 aa11.72□□□□□ -0.53
SYCP1-205ENST00000477215 TBC1D12O60347 775 aa11.71□□□□□ -0.53
SYCP1-205ENST00000477215 HS6ST3Q8IZP7 471 aa11.7□□□□□ -0.54
SYCP1-205ENST00000477215 THSD4Q6ZMP0 1018 aa11.68□□□□□ -0.54
SYCP1-205ENST00000477215 PLPP6Q8IY26 295 aa11.68□□□□□ -0.54
SYCP1-205ENST00000477215 GOLGA8CPA6NN73 597 aa11.67□□□□□ -0.54
SYCP1-205ENST00000477215 FOXK1P85037 733 aa11.66□□□□□ -0.54
SYCP1-205ENST00000477215 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
SYCP1-205ENST00000477215 PPP1R37O75864 691 aa11.64□□□□□ -0.55
SYCP1-205ENST00000477215 WNT2BQ93097 391 aa11.63□□□□□ -0.55
SYCP1-205ENST00000477215 SLC4A5Q9BY07 1137 aa11.62□□□□□ -0.55
SYCP1-205ENST00000477215 Q6ZNB5 142 aa11.61□□□□□ -0.55
SYCP1-205ENST00000477215 RTN4Q9NQC3 1192 aaKnown RBP11.61□□□□□ -0.55
SYCP1-205ENST00000477215 BHMG1C9JSJ3 638 aaPredicted RBP11.59□□□□□ -0.55
SYCP1-205ENST00000477215 MRPL50Q8N5N7 158 aaKnown RBP11.59□□□□□ -0.55
SYCP1-205ENST00000477215 ZNF454Q8N9F8 522 aa11.58□□□□□ -0.56
SYCP1-205ENST00000477215 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
SYCP1-205ENST00000477215 GPHNQ9NQX3 736 aaPredicted RBP11.58□□□□□ -0.56
SYCP1-205ENST00000477215 DSG2Q14126 1118 aa11.57□□□□□ -0.56
SYCP1-205ENST00000477215 PTPREP23469 700 aa11.55□□□□□ -0.56
SYCP1-205ENST00000477215 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
SYCP1-205ENST00000477215 NBPF3Q9H094 633 aa11.53□□□□□ -0.56
SYCP1-205ENST00000477215 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
SYCP1-205ENST00000477215 UPF1Q92900 1129 aaKnown RBP eCLIP11.5□□□□□ -0.57
SYCP1-205ENST00000477215 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
SYCP1-205ENST00000477215 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
SYCP1-205ENST00000477215 RYDENQ9NUL5 291 aaKnown RBP11.48□□□□□ -0.57
SYCP1-205ENST00000477215 ITGBL1O95965 494 aaPredicted RBP11.46□□□□□ -0.57
SYCP1-205ENST00000477215 FOSBP53539 338 aa11.46□□□□□ -0.57
SYCP1-205ENST00000477215 ANKK1Q8NFD2 765 aa11.42□□□□□ -0.58
SYCP1-205ENST00000477215 LAPTM4AQ15012 233 aa11.4□□□□□ -0.58
SYCP1-205ENST00000477215 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
SYCP1-205ENST00000477215 GTPBP6O43824 516 aaPredicted RBP11.39□□□□□ -0.59
SYCP1-205ENST00000477215 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
SYCP1-205ENST00000477215 ADAM33Q9BZ11 813 aa11.37□□□□□ -0.59
SYCP1-205ENST00000477215 BCAMP50895 628 aa11.35□□□□□ -0.59
SYCP1-205ENST00000477215 KCNC4Q03721 635 aa11.35□□□□□ -0.59
SYCP1-205ENST00000477215 TRAF7Q6Q0C0 670 aa11.35□□□□□ -0.59
SYCP1-205ENST00000477215 NYAP1Q6ZVC0 841 aa11.35□□□□□ -0.59
SYCP1-205ENST00000477215 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
SYCP1-205ENST00000477215 RABGEF1Q9UJ41 708 aa11.35□□□□□ -0.59
SYCP1-205ENST00000477215 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
SYCP1-205ENST00000477215 PPP1R15BQ5SWA1 713 aa11.33□□□□□ -0.6
SYCP1-205ENST00000477215 PPP1R3GB7ZBB8 358 aa11.32□□□□□ -0.6
SYCP1-205ENST00000477215 EVI5O60447 810 aa11.32□□□□□ -0.6
SYCP1-205ENST00000477215 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms