RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
CDKN1B-204ENST00000477087 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
CDKN1B-204ENST00000477087 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
CDKN1B-204ENST00000477087 GTPBP6O43824 516 aaPredicted RBP12.92□□□□□ -0.34
CDKN1B-204ENST00000477087 BBXQ8WY36 941 aaPredicted RBP12.92□□□□□ -0.34
CDKN1B-204ENST00000477087 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
CDKN1B-204ENST00000477087 C2orf72A6NCS6 295 aa12.9□□□□□ -0.34
CDKN1B-204ENST00000477087 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
CDKN1B-204ENST00000477087 KIF3CO14782 793 aa12.87□□□□□ -0.35
CDKN1B-204ENST00000477087 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
CDKN1B-204ENST00000477087 EMP3P54852 163 aa12.82□□□□□ -0.36
CDKN1B-204ENST00000477087 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
CDKN1B-204ENST00000477087 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
CDKN1B-204ENST00000477087 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
CDKN1B-204ENST00000477087 HOXB1P14653 301 aaPredicted RBP12.78□□□□□ -0.36
CDKN1B-204ENST00000477087 SPRYD3Q8NCJ5 442 aa12.78□□□□□ -0.36
CDKN1B-204ENST00000477087 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
CDKN1B-204ENST00000477087 PDE4AP27815 886 aa12.75□□□□□ -0.37
CDKN1B-204ENST00000477087 FOXK1P85037 733 aa12.75□□□□□ -0.37
CDKN1B-204ENST00000477087 PLPP6Q8IY26 295 aa12.73□□□□□ -0.37
CDKN1B-204ENST00000477087 CFAP44Q96MT7 982 aa12.73□□□□□ -0.37
CDKN1B-204ENST00000477087 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
CDKN1B-204ENST00000477087 DSG2Q14126 1118 aa12.72□□□□□ -0.37
CDKN1B-204ENST00000477087 PAXIP1Q6ZW49 1069 aaPredicted RBP12.72□□□□□ -0.37
CDKN1B-204ENST00000477087 CRISPLD2Q9H0B8 497 aa12.72□□□□□ -0.37
CDKN1B-204ENST00000477087 ARSIQ5FYB1 569 aa12.71□□□□□ -0.37
CDKN1B-204ENST00000477087 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
CDKN1B-204ENST00000477087 SLC34A2O95436 690 aa12.7□□□□□ -0.38
CDKN1B-204ENST00000477087 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
CDKN1B-204ENST00000477087 ERBB3P21860 1342 aa12.69□□□□□ -0.38
CDKN1B-204ENST00000477087 NCKAP5LQ9HCH0 1330 aa12.68□□□□□ -0.38
CDKN1B-204ENST00000477087 PPP1R15BQ5SWA1 713 aa12.68□□□□□ -0.38
CDKN1B-204ENST00000477087 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
CDKN1B-204ENST00000477087 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
CDKN1B-204ENST00000477087 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
CDKN1B-204ENST00000477087 KHSRPQ92945 711 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDKN1B-204ENST00000477087 DDX27Q96GQ7 796 aaKnown RBP12.65□□□□□ -0.38
CDKN1B-204ENST00000477087 TBC1D12O60347 775 aa12.63□□□□□ -0.39
CDKN1B-204ENST00000477087 CADPS2Q86UW7 1296 aa12.63□□□□□ -0.39
CDKN1B-204ENST00000477087 NUDT7P0C024 238 aa12.62□□□□□ -0.39
CDKN1B-204ENST00000477087 VARS2Q5ST30 1063 aaKnown RBP12.61□□□□□ -0.39
CDKN1B-204ENST00000477087 PTCD2Q8WV60 388 aaKnown RBP12.61□□□□□ -0.39
CDKN1B-204ENST00000477087 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
CDKN1B-204ENST00000477087 MFSD10Q14728 455 aa12.59□□□□□ -0.39
CDKN1B-204ENST00000477087 POTEBQ6S5H4 581 aa12.59□□□□□ -0.39
CDKN1B-204ENST00000477087 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
CDKN1B-204ENST00000477087 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
CDKN1B-204ENST00000477087 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
CDKN1B-204ENST00000477087 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
CDKN1B-204ENST00000477087 LHX6Q9UPM6 363 aa12.53□□□□□ -0.4
CDKN1B-204ENST00000477087 ZNF687Q8N1G0 1237 aa12.51□□□□□ -0.41
CDKN1B-204ENST00000477087 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
CDKN1B-204ENST00000477087 MAP3K9P80192 1104 aa12.47□□□□□ -0.41
CDKN1B-204ENST00000477087 KRTAP3-3Q9BYR6 98 aa12.46□□□□□ -0.41
CDKN1B-204ENST00000477087 KRTAP3-2Q9BYR7 98 aa12.46□□□□□ -0.41
CDKN1B-204ENST00000477087 WDR70Q9NW82 654 aa12.46□□□□□ -0.41
CDKN1B-204ENST00000477087 KDM4FA0A1W2PPD8 638 aa12.45□□□□□ -0.42
CDKN1B-204ENST00000477087 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
CDKN1B-204ENST00000477087 EVI5O60447 810 aa12.42□□□□□ -0.42
CDKN1B-204ENST00000477087 CAMK2BQ13554 666 aa12.41□□□□□ -0.42
CDKN1B-204ENST00000477087 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
CDKN1B-204ENST00000477087 PBX2P40425 430 aa12.39□□□□□ -0.43
CDKN1B-204ENST00000477087 TSHZ2Q9NRE2 1034 aa12.39□□□□□ -0.43
CDKN1B-204ENST00000477087 PLCB2Q00722 1185 aa12.37□□□□□ -0.43
CDKN1B-204ENST00000477087 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
CDKN1B-204ENST00000477087 ZNF454Q8N9F8 522 aa12.37□□□□□ -0.43
CDKN1B-204ENST00000477087 E2F4Q16254 413 aa12.36□□□□□ -0.43
CDKN1B-204ENST00000477087 DPYSL4O14531 572 aa12.35□□□□□ -0.43
CDKN1B-204ENST00000477087 ANO8Q9HCE9 1232 aaPredicted RBP12.35□□□□□ -0.43
CDKN1B-204ENST00000477087 ARHGAP33O14559 1287 aa12.32□□□□□ -0.44
CDKN1B-204ENST00000477087 ANKRD13DQ6ZTN6 518 aa12.32□□□□□ -0.44
CDKN1B-204ENST00000477087 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
CDKN1B-204ENST00000477087 KCNH8Q96L42 1107 aa12.32□□□□□ -0.44
CDKN1B-204ENST00000477087 AXIN2Q9Y2T1 843 aa12.32□□□□□ -0.44
CDKN1B-204ENST00000477087 LSM11P83369 360 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDKN1B-204ENST00000477087 FOSBP53539 338 aa12.3□□□□□ -0.44
CDKN1B-204ENST00000477087 POTEEQ6S8J3 1075 aa12.29□□□□□ -0.44
CDKN1B-204ENST00000477087 MMRN1Q13201 1228 aa12.27□□□□□ -0.45
CDKN1B-204ENST00000477087 ZDHHC16Q969W1 377 aa12.26□□□□□ -0.45
CDKN1B-204ENST00000477087 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
CDKN1B-204ENST00000477087 PSEN2P49810 448 aa12.25□□□□□ -0.45
CDKN1B-204ENST00000477087 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
CDKN1B-204ENST00000477087 PHF14O94880 888 aa12.24□□□□□ -0.45
CDKN1B-204ENST00000477087 PTGER2P43116 358 aa12.24□□□□□ -0.45
CDKN1B-204ENST00000477087 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
CDKN1B-204ENST00000477087 BCL2L12Q9HB09 334 aa12.24□□□□□ -0.45
CDKN1B-204ENST00000477087 PTPREP23469 700 aa12.23□□□□□ -0.45
CDKN1B-204ENST00000477087 PDIA6Q15084 440 aa12.23□□□□□ -0.45
CDKN1B-204ENST00000477087 TYW1BQ6NUM6 668 aa12.22□□□□□ -0.45
CDKN1B-204ENST00000477087 ARIH1Q9Y4X5 557 aaPredicted RBP12.22□□□□□ -0.45
CDKN1B-204ENST00000477087 PCDHGA10Q9Y5H3 936 aa12.22□□□□□ -0.45
CDKN1B-204ENST00000477087 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
CDKN1B-204ENST00000477087 FBXW7Q969H0 707 aa12.2□□□□□ -0.46
CDKN1B-204ENST00000477087 EPAS1Q99814 870 aa12.2□□□□□ -0.46
CDKN1B-204ENST00000477087 ADAM33Q9BZ11 813 aa12.2□□□□□ -0.46
CDKN1B-204ENST00000477087 ADGRD1Q6QNK2 874 aa12.19□□□□□ -0.46
CDKN1B-204ENST00000477087 DDX12PQ92771 950 aa12.19□□□□□ -0.46
CDKN1B-204ENST00000477087 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
CDKN1B-204ENST00000477087 TK2O00142 265 aa12.17□□□□□ -0.46
CDKN1B-204ENST00000477087 RNF166Q96A37 237 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms