RNA–Protein interactions for RNA: ENST00000476744.5

CCNL1-218, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-218ENST00000476744 PPP1R37O75864 691 aa13.31□□□□□ -0.28
CCNL1-218ENST00000476744 BBXQ8WY36 941 aaPredicted RBP13.29□□□□□ -0.28
CCNL1-218ENST00000476744 GTPBP6O43824 516 aaPredicted RBP13.25□□□□□ -0.29
CCNL1-218ENST00000476744 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
CCNL1-218ENST00000476744 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
CCNL1-218ENST00000476744 SNPHO15079 494 aa13.22□□□□□ -0.29
CCNL1-218ENST00000476744 TMEM92Q6UXU6 159 aa13.21□□□□□ -0.29
CCNL1-218ENST00000476744 FAM163AQ96GL9 167 aaPredicted RBP13.21□□□□□ -0.29
CCNL1-218ENST00000476744 SUPT5HO00267 1087 aaKnown RBP13.2□□□□□ -0.3
CCNL1-218ENST00000476744 UNC13AQ9UPW8 1703 aa13.16□□□□□ -0.3
CCNL1-218ENST00000476744 TMC2Q8TDI7 906 aa13.16□□□□□ -0.3
CCNL1-218ENST00000476744 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
CCNL1-218ENST00000476744 C2orf72A6NCS6 295 aa13.13□□□□□ -0.31
CCNL1-218ENST00000476744 PAXIP1Q6ZW49 1069 aaPredicted RBP13.11□□□□□ -0.31
CCNL1-218ENST00000476744 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
CCNL1-218ENST00000476744 KIF3CO14782 793 aa13.09□□□□□ -0.31
CCNL1-218ENST00000476744 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
CCNL1-218ENST00000476744 RSF1Q96T23 1441 aaPredicted RBP13.09□□□□□ -0.31
CCNL1-218ENST00000476744 ST18O60284 1047 aa13.08□□□□□ -0.32
CCNL1-218ENST00000476744 ZNF710Q8N1W2 664 aa13.07□□□□□ -0.32
CCNL1-218ENST00000476744 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
CCNL1-218ENST00000476744 LCE2DQ5TA82 110 aaPredicted RBP13.06□□□□□ -0.32
CCNL1-218ENST00000476744 RIMBP2O15034 1052 aa13.05□□□□□ -0.32
CCNL1-218ENST00000476744 GPHNQ9NQX3 736 aaPredicted RBP13.04□□□□□ -0.32
CCNL1-218ENST00000476744 POTEMA6NI47 508 aa13□□□□□ -0.33
CCNL1-218ENST00000476744 PDE4AP27815 886 aa13□□□□□ -0.33
CCNL1-218ENST00000476744 POTEGQ6S5H5 508 aa13□□□□□ -0.33
CCNL1-218ENST00000476744 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
CCNL1-218ENST00000476744 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
CCNL1-218ENST00000476744 FOXK1P85037 733 aa12.98□□□□□ -0.33
CCNL1-218ENST00000476744 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
CCNL1-218ENST00000476744 DSG2Q14126 1118 aa12.97□□□□□ -0.33
CCNL1-218ENST00000476744 PLPP6Q8IY26 295 aa12.97□□□□□ -0.33
CCNL1-218ENST00000476744 CADPS2Q86UW7 1296 aa12.96□□□□□ -0.33
CCNL1-218ENST00000476744 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
CCNL1-218ENST00000476744 MROH2BQ7Z745 1585 aa12.95□□□□□ -0.34
CCNL1-218ENST00000476744 MARVELD3Q96A59 401 aa12.95□□□□□ -0.34
CCNL1-218ENST00000476744 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
CCNL1-218ENST00000476744 EMP3P54852 163 aa12.94□□□□□ -0.34
CCNL1-218ENST00000476744 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
CCNL1-218ENST00000476744 HOXB1P14653 301 aaPredicted RBP12.93□□□□□ -0.34
CCNL1-218ENST00000476744 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
CCNL1-218ENST00000476744 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
CCNL1-218ENST00000476744 WIZO95785 1651 aa12.91□□□□□ -0.34
CCNL1-218ENST00000476744 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
CCNL1-218ENST00000476744 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
CCNL1-218ENST00000476744 SLC34A2O95436 690 aa12.9□□□□□ -0.34
CCNL1-218ENST00000476744 ARSIQ5FYB1 569 aa12.89□□□□□ -0.35
CCNL1-218ENST00000476744 BICRAQ9NZM4 1560 aa12.89□□□□□ -0.35
CCNL1-218ENST00000476744 GPR153Q6NV75 609 aa12.88□□□□□ -0.35
CCNL1-218ENST00000476744 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
CCNL1-218ENST00000476744 MFSD10Q14728 455 aa12.86□□□□□ -0.35
CCNL1-218ENST00000476744 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
CCNL1-218ENST00000476744 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCNL1-218ENST00000476744 PTCD2Q8WV60 388 aaKnown RBP12.83□□□□□ -0.36
CCNL1-218ENST00000476744 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.36
CCNL1-218ENST00000476744 PEG3Q9GZU2 1588 aa12.82□□□□□ -0.36
CCNL1-218ENST00000476744 TBC1D12O60347 775 aa12.82□□□□□ -0.36
CCNL1-218ENST00000476744 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
CCNL1-218ENST00000476744 UPF1Q92900 1129 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCNL1-218ENST00000476744 ERBB3P21860 1342 aa12.82□□□□□ -0.36
CCNL1-218ENST00000476744 NUDT7P0C024 238 aa12.81□□□□□ -0.36
CCNL1-218ENST00000476744 HS3ST6Q96QI5 342 aa12.79□□□□□ -0.36
CCNL1-218ENST00000476744 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
CCNL1-218ENST00000476744 OXER1Q8TDS5 423 aa12.77□□□□□ -0.37
CCNL1-218ENST00000476744 WDR70Q9NW82 654 aa12.77□□□□□ -0.37
CCNL1-218ENST00000476744 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
CCNL1-218ENST00000476744 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
CCNL1-218ENST00000476744 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
CCNL1-218ENST00000476744 ZNF316A6NFI3 1004 aaPredicted RBP12.74□□□□□ -0.37
CCNL1-218ENST00000476744 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
CCNL1-218ENST00000476744 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
CCNL1-218ENST00000476744 SMARCA2P51531 1590 aa12.72□□□□□ -0.37
CCNL1-218ENST00000476744 MAP3K9P80192 1104 aa12.71□□□□□ -0.37
CCNL1-218ENST00000476744 EMILIN3Q9NT22 766 aa12.71□□□□□ -0.37
CCNL1-218ENST00000476744 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
CCNL1-218ENST00000476744 CAMK2BQ13554 666 aa12.69□□□□□ -0.38
CCNL1-218ENST00000476744 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
CCNL1-218ENST00000476744 KDM4FA0A1W2PPD8 638 aa12.66□□□□□ -0.38
CCNL1-218ENST00000476744 E2F4Q16254 413 aa12.66□□□□□ -0.38
CCNL1-218ENST00000476744 PSDA5PKW4 1024 aaPredicted RBP12.65□□□□□ -0.38
CCNL1-218ENST00000476744 EVI5O60447 810 aa12.65□□□□□ -0.38
CCNL1-218ENST00000476744 DPYSL4O14531 572 aa12.63□□□□□ -0.39
CCNL1-218ENST00000476744 ZNF687Q8N1G0 1237 aa12.63□□□□□ -0.39
CCNL1-218ENST00000476744 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
CCNL1-218ENST00000476744 CCDC88BA6NC98 1476 aa12.58□□□□□ -0.4
CCNL1-218ENST00000476744 ZNF454Q8N9F8 522 aa12.57□□□□□ -0.4
CCNL1-218ENST00000476744 KRTAP3-3Q9BYR6 98 aa12.57□□□□□ -0.4
CCNL1-218ENST00000476744 KRTAP3-2Q9BYR7 98 aa12.57□□□□□ -0.4
CCNL1-218ENST00000476744 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
CCNL1-218ENST00000476744 PBX2P40425 430 aa12.53□□□□□ -0.4
CCNL1-218ENST00000476744 JPH4Q96JJ6 628 aa12.53□□□□□ -0.4
CCNL1-218ENST00000476744 FOSBP53539 338 aa12.52□□□□□ -0.41
CCNL1-218ENST00000476744 PDIA6Q15084 440 aa12.51□□□□□ -0.41
CCNL1-218ENST00000476744 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
CCNL1-218ENST00000476744 SPDYE16A6NNV3 312 aaPredicted RBP12.5□□□□□ -0.41
CCNL1-218ENST00000476744 ARIH1Q9Y4X5 557 aaPredicted RBP12.5□□□□□ -0.41
CCNL1-218ENST00000476744 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
CCNL1-218ENST00000476744 KCNV2Q8TDN2 545 aa12.49□□□□□ -0.41
CCNL1-218ENST00000476744 KCNH8Q96L42 1107 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms