RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 FANCAO15360 1455 aa20.61■□□□□ 0.89
HLA-DPA1-246ENST00000476642 PREX2Q70Z35 1606 aa20.6■□□□□ 0.89
HLA-DPA1-246ENST00000476642 ITSN2Q9NZM3 1697 aa20.59■□□□□ 0.89
HLA-DPA1-246ENST00000476642 EFCAB2Q5VUJ9 269 aa20.59■□□□□ 0.89
HLA-DPA1-246ENST00000476642 HECW2Q9P2P5 1572 aa20.59■□□□□ 0.89
HLA-DPA1-246ENST00000476642 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
HLA-DPA1-246ENST00000476642 CDC42BPAQ5VT25 1732 aa20.58■□□□□ 0.89
HLA-DPA1-246ENST00000476642 ARHGAP5Q13017 1502 aa20.58■□□□□ 0.89
HLA-DPA1-246ENST00000476642 CDC42BPBQ9Y5S2 1711 aa20.57■□□□□ 0.88
HLA-DPA1-246ENST00000476642 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
HLA-DPA1-246ENST00000476642 NCOA2Q15596 1464 aa20.56■□□□□ 0.88
HLA-DPA1-246ENST00000476642 AKNAQ7Z591 1439 aa20.54■□□□□ 0.88
HLA-DPA1-246ENST00000476642 GPATCH8Q9UKJ3 1502 aaKnown RBP20.54■□□□□ 0.88
HLA-DPA1-246ENST00000476642 KANK4Q5T7N3 995 aaPredicted RBP20.53■□□□□ 0.88
HLA-DPA1-246ENST00000476642 ILDR1Q86SU0 546 aaPredicted RBP20.53■□□□□ 0.88
HLA-DPA1-246ENST00000476642 CFDP1Q9UEE9 299 aaPredicted RBP20.5■□□□□ 0.87
HLA-DPA1-246ENST00000476642 DENND4BO75064 1496 aaPredicted RBP20.5■□□□□ 0.87
HLA-DPA1-246ENST00000476642 PLEKHH2Q8IVE3 1493 aa20.48■□□□□ 0.87
HLA-DPA1-246ENST00000476642 SCAPERQ9BY12 1400 aa20.44■□□□□ 0.86
HLA-DPA1-246ENST00000476642 PTPRMP28827 1452 aa20.44■□□□□ 0.86
HLA-DPA1-246ENST00000476642 ABCC1P33527 1531 aa20.43■□□□□ 0.86
HLA-DPA1-246ENST00000476642 FRMPD1Q5SYB0 1578 aa20.43■□□□□ 0.86
HLA-DPA1-246ENST00000476642 ZNF777Q9ULD5 760 aaPredicted RBP20.43■□□□□ 0.86
HLA-DPA1-246ENST00000476642 RICTORQ6R327 1708 aa20.43■□□□□ 0.86
HLA-DPA1-246ENST00000476642 MYOM3Q5VTT5 1437 aa20.43■□□□□ 0.86
HLA-DPA1-246ENST00000476642 MIA2Q96PC5 1412 aa20.43■□□□□ 0.86
HLA-DPA1-246ENST00000476642 SAMD9LQ8IVG5 1584 aa20.42■□□□□ 0.86
HLA-DPA1-246ENST00000476642 ADAMTSL3P82987 1691 aa20.42■□□□□ 0.86
HLA-DPA1-246ENST00000476642 KIAA1107Q9UPP5 1409 aa20.41■□□□□ 0.86
HLA-DPA1-246ENST00000476642 ZNF518AQ6AHZ1 1483 aa20.41■□□□□ 0.86
HLA-DPA1-246ENST00000476642 POGZQ7Z3K3 1410 aa20.4■□□□□ 0.86
HLA-DPA1-246ENST00000476642 ARHGEF40Q8TER5 1519 aa20.39■□□□□ 0.85
HLA-DPA1-246ENST00000476642 BCORL1Q5H9F3 1711 aa20.38■□□□□ 0.85
HLA-DPA1-246ENST00000476642 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
HLA-DPA1-246ENST00000476642 MAGI2Q86UL8 1455 aa20.37■□□□□ 0.85
HLA-DPA1-246ENST00000476642 RSPH4AQ5TD94 716 aa20.37■□□□□ 0.85
HLA-DPA1-246ENST00000476642 SYCP2Q9BX26 1530 aa20.36■□□□□ 0.85
HLA-DPA1-246ENST00000476642 CAMSAP2Q08AD1 1489 aa20.36■□□□□ 0.85
HLA-DPA1-246ENST00000476642 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
HLA-DPA1-246ENST00000476642 MADDQ8WXG6 1647 aa20.35■□□□□ 0.85
HLA-DPA1-246ENST00000476642 ZFYVE16Q7Z3T8 1539 aa20.34■□□□□ 0.85
HLA-DPA1-246ENST00000476642 KDM5CP41229 1560 aa20.34■□□□□ 0.85
HLA-DPA1-246ENST00000476642 MLECQ14165 292 aa20.32■□□□□ 0.84
HLA-DPA1-246ENST00000476642 FGD6Q6ZV73 1430 aa20.32■□□□□ 0.84
HLA-DPA1-246ENST00000476642 ARHGEF12Q9NZN5 1544 aa20.32■□□□□ 0.84
HLA-DPA1-246ENST00000476642 PTPN23Q9H3S7 1636 aa20.31■□□□□ 0.84
HLA-DPA1-246ENST00000476642 HNRNPMP52272 730 aaKnown RBP eCLIP20.31■□□□□ 0.84
HLA-DPA1-246ENST00000476642 ARHGEF5Q12774 1597 aa20.3■□□□□ 0.84
HLA-DPA1-246ENST00000476642 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
HLA-DPA1-246ENST00000476642 TRAPPC8Q9Y2L5 1435 aa20.3■□□□□ 0.84
HLA-DPA1-246ENST00000476642 ZNF644Q9H582 1327 aaPredicted RBP20.29■□□□□ 0.84
HLA-DPA1-246ENST00000476642 AFAP1Q8N556 730 aa20.29■□□□□ 0.84
HLA-DPA1-246ENST00000476642 MYT1LQ9UL68 1186 aa20.29■□□□□ 0.84
HLA-DPA1-246ENST00000476642 MLH3Q9UHC1 1453 aa20.29■□□□□ 0.84
HLA-DPA1-246ENST00000476642 RIMS1Q86UR5 1692 aaKnown RBP20.29■□□□□ 0.84
HLA-DPA1-246ENST00000476642 CCDC141Q6ZP82 1450 aa20.28■□□□□ 0.84
HLA-DPA1-246ENST00000476642 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
HLA-DPA1-246ENST00000476642 TCOF1Q13428 1488 aaKnown RBP20.27■□□□□ 0.84
HLA-DPA1-246ENST00000476642 SPAG9O60271 1321 aaKnown RBP20.27■□□□□ 0.83
HLA-DPA1-246ENST00000476642 PPARGC1BQ86YN6 1023 aaKnown RBP20.26■□□□□ 0.83
HLA-DPA1-246ENST00000476642 TSPY4P0CV99 314 aa20.25■□□□□ 0.83
HLA-DPA1-246ENST00000476642 TSPY10P0CW01 314 aa20.25■□□□□ 0.83
HLA-DPA1-246ENST00000476642 ATP10AO60312 1499 aa20.24■□□□□ 0.83
HLA-DPA1-246ENST00000476642 RTEL1-TNFRSF6BF6WH68 1400 aa20.23■□□□□ 0.83
HLA-DPA1-246ENST00000476642 INO80Q9ULG1 1556 aaPredicted RBP20.22■□□□□ 0.83
HLA-DPA1-246ENST00000476642 KIDINS220Q9ULH0 1771 aa20.22■□□□□ 0.83
HLA-DPA1-246ENST00000476642 FBXO41Q8TF61 875 aa20.22■□□□□ 0.83
HLA-DPA1-246ENST00000476642 LMTK3Q96Q04 1460 aa20.22■□□□□ 0.83
HLA-DPA1-246ENST00000476642 ATP7AQ04656 1500 aa20.22■□□□□ 0.83
HLA-DPA1-246ENST00000476642 C9orf84Q5VXU9 1444 aa20.21■□□□□ 0.83
HLA-DPA1-246ENST00000476642 DNMT1P26358 1616 aaKnown RBP20.2■□□□□ 0.82
HLA-DPA1-246ENST00000476642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.2■□□□□ 0.82
HLA-DPA1-246ENST00000476642 HSPA2P54652 639 aa20.19■□□□□ 0.82
HLA-DPA1-246ENST00000476642 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
HLA-DPA1-246ENST00000476642 MAST1Q9Y2H9 1570 aa20.19■□□□□ 0.82
HLA-DPA1-246ENST00000476642 REREQ9P2R6 1566 aa20.18■□□□□ 0.82
HLA-DPA1-246ENST00000476642 DIP2CQ9Y2E4 1556 aa20.18■□□□□ 0.82
HLA-DPA1-246ENST00000476642 CROCC2H7BZ55 1655 aa20.18■□□□□ 0.82
HLA-DPA1-246ENST00000476642 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
HLA-DPA1-246ENST00000476642 ABCA6Q8N139 1617 aa20.17■□□□□ 0.82
HLA-DPA1-246ENST00000476642 ADGBQ8N7X0 1667 aa20.17■□□□□ 0.82
HLA-DPA1-246ENST00000476642 DAPK1P53355 1430 aa20.16■□□□□ 0.82
HLA-DPA1-246ENST00000476642 RRBP1Q9P2E9 1410 aaKnown RBP20.15■□□□□ 0.82
HLA-DPA1-246ENST00000476642 SIGLEC1Q9BZZ2 1709 aa20.15■□□□□ 0.82
HLA-DPA1-246ENST00000476642 FER1L4A9Z1Z3 1794 aa20.15■□□□□ 0.82
HLA-DPA1-246ENST00000476642 ABCC5O15440 1437 aa20.13■□□□□ 0.81
HLA-DPA1-246ENST00000476642 ESF1Q9H501 851 aaKnown RBP20.12■□□□□ 0.81
HLA-DPA1-246ENST00000476642 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
HLA-DPA1-246ENST00000476642 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
HLA-DPA1-246ENST00000476642 AGLP35573 1532 aa20.1■□□□□ 0.81
HLA-DPA1-246ENST00000476642 A2MP01023 1474 aa20.1■□□□□ 0.81
HLA-DPA1-246ENST00000476642 ANKRD30AQ9BXX3 1397 aa20.08■□□□□ 0.8
HLA-DPA1-246ENST00000476642 DHX29Q7Z478 1369 aaKnown RBP20.06■□□□□ 0.8
HLA-DPA1-246ENST00000476642 ADGRL2O95490 1459 aa20.05■□□□□ 0.8
HLA-DPA1-246ENST00000476642 DUOX2Q9NRD8 1548 aa20.04■□□□□ 0.8
HLA-DPA1-246ENST00000476642 KIF15Q9NS87 1388 aa20.02■□□□□ 0.8
HLA-DPA1-246ENST00000476642 ROCK1Q13464 1354 aa20.01■□□□□ 0.79
HLA-DPA1-246ENST00000476642 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
HLA-DPA1-246ENST00000476642 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
HLA-DPA1-246ENST00000476642 EIF2AK4Q9P2K8 1649 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms