RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 POTEMA6NI47 508 aa15.93■□□□□ 0.14
RPGR-207ENST00000476559 HOXB3P14651 431 aaPredicted RBP15.93■□□□□ 0.14
RPGR-207ENST00000476559 POTEGQ6S5H5 508 aa15.93■□□□□ 0.14
RPGR-207ENST00000476559 TMC2Q8TDI7 906 aa15.93■□□□□ 0.14
RPGR-207ENST00000476559 KIF3CO14782 793 aa15.91■□□□□ 0.14
RPGR-207ENST00000476559 DOK7Q18PE1 504 aa15.88■□□□□ 0.13
RPGR-207ENST00000476559 ZNF710Q8N1W2 664 aa15.87■□□□□ 0.13
RPGR-207ENST00000476559 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.87■□□□□ 0.13
RPGR-207ENST00000476559 MARVELD3Q96A59 401 aa15.85■□□□□ 0.13
RPGR-207ENST00000476559 SPRYD3Q8NCJ5 442 aa15.81■□□□□ 0.12
RPGR-207ENST00000476559 RIMBP2O15034 1052 aa15.8■□□□□ 0.12
RPGR-207ENST00000476559 GPHNQ9NQX3 736 aaPredicted RBP15.8■□□□□ 0.12
RPGR-207ENST00000476559 CFAP44Q96MT7 982 aa15.79■□□□□ 0.12
RPGR-207ENST00000476559 PAXIP1Q6ZW49 1069 aaPredicted RBP15.78■□□□□ 0.12
RPGR-207ENST00000476559 EMP3P54852 163 aa15.76■□□□□ 0.11
RPGR-207ENST00000476559 DSG2Q14126 1118 aa15.75■□□□□ 0.11
RPGR-207ENST00000476559 NCKAP5LQ9HCH0 1330 aa15.73■□□□□ 0.11
RPGR-207ENST00000476559 HOXB1P14653 301 aaPredicted RBP15.73■□□□□ 0.11
RPGR-207ENST00000476559 FOXK1P85037 733 aa15.73■□□□□ 0.11
RPGR-207ENST00000476559 CADPS2Q86UW7 1296 aa15.73■□□□□ 0.11
RPGR-207ENST00000476559 PLPP6Q8IY26 295 aa15.73■□□□□ 0.11
RPGR-207ENST00000476559 CRISPLD2Q9H0B8 497 aa15.73■□□□□ 0.11
RPGR-207ENST00000476559 ARSIQ5FYB1 569 aa15.71■□□□□ 0.11
RPGR-207ENST00000476559 PDE4AP27815 886 aa15.7■□□□□ 0.1
RPGR-207ENST00000476559 GPR153Q6NV75 609 aa15.7■□□□□ 0.1
RPGR-207ENST00000476559 ZSWIM6Q9HCJ5 1215 aa15.7■□□□□ 0.1
RPGR-207ENST00000476559 KHSRPQ92945 711 aaKnown RBP eCLIP15.69■□□□□ 0.1
RPGR-207ENST00000476559 LARP6Q9BRS8 491 aaKnown RBP15.68■□□□□ 0.1
RPGR-207ENST00000476559 FAM205CA6NFA0 338 aa15.67■□□□□ 0.1
RPGR-207ENST00000476559 PPP1R15BQ5SWA1 713 aa15.65■□□□□ 0.1
RPGR-207ENST00000476559 SLC34A2O95436 690 aa15.64■□□□□ 0.09
RPGR-207ENST00000476559 PCDHGA4Q9Y5G9 962 aa15.63■□□□□ 0.09
RPGR-207ENST00000476559 CDAN1Q8IWY9 1227 aa15.62■□□□□ 0.09
RPGR-207ENST00000476559 POTEB3A0JP26 581 aa15.61■□□□□ 0.09
RPGR-207ENST00000476559 POTEBQ6S5H4 581 aa15.61■□□□□ 0.09
RPGR-207ENST00000476559 DDX27Q96GQ7 796 aaKnown RBP15.61■□□□□ 0.09
RPGR-207ENST00000476559 HS3ST6Q96QI5 342 aa15.61■□□□□ 0.09
RPGR-207ENST00000476559 ERBB3P21860 1342 aa15.61■□□□□ 0.09
RPGR-207ENST00000476559 NUDT7P0C024 238 aa15.58■□□□□ 0.08
RPGR-207ENST00000476559 PTCD2Q8WV60 388 aaKnown RBP15.56■□□□□ 0.08
RPGR-207ENST00000476559 UPF1Q92900 1129 aaKnown RBP eCLIP15.56■□□□□ 0.08
RPGR-207ENST00000476559 PCDH10Q9P2E7 1040 aa15.56■□□□□ 0.08
RPGR-207ENST00000476559 MFSD10Q14728 455 aa15.55■□□□□ 0.08
RPGR-207ENST00000476559 VARS2Q5ST30 1063 aaKnown RBP15.55■□□□□ 0.08
RPGR-207ENST00000476559 ZNF316A6NFI3 1004 aaPredicted RBP15.49■□□□□ 0.07
RPGR-207ENST00000476559 TBC1D12O60347 775 aa15.49■□□□□ 0.07
RPGR-207ENST00000476559 OXER1Q8TDS5 423 aa15.49■□□□□ 0.07
RPGR-207ENST00000476559 LHX6Q9UPM6 363 aa15.47■□□□□ 0.07
RPGR-207ENST00000476559 TSHZ2Q9NRE2 1034 aa15.46■□□□□ 0.07
RPGR-207ENST00000476559 EMILIN3Q9NT22 766 aa15.43■□□□□ 0.06
RPGR-207ENST00000476559 KDM4FA0A1W2PPD8 638 aa15.42■□□□□ 0.06
RPGR-207ENST00000476559 PLSCR2Q9NRY7 297 aa15.39■□□□□ 0.05
RPGR-207ENST00000476559 MAP3K9P80192 1104 aa15.38■□□□□ 0.05
RPGR-207ENST00000476559 KRTAP3-3Q9BYR6 98 aa15.38■□□□□ 0.05
RPGR-207ENST00000476559 KRTAP3-2Q9BYR7 98 aa15.38■□□□□ 0.05
RPGR-207ENST00000476559 PLCB2Q00722 1185 aa15.37■□□□□ 0.05
RPGR-207ENST00000476559 ZNF687Q8N1G0 1237 aa15.37■□□□□ 0.05
RPGR-207ENST00000476559 WDR70Q9NW82 654 aa15.36■□□□□ 0.05
RPGR-207ENST00000476559 CAMK2BQ13554 666 aa15.35■□□□□ 0.05
RPGR-207ENST00000476559 EVI5O60447 810 aa15.33■□□□□ 0.04
RPGR-207ENST00000476559 DPYSL4O14531 572 aa15.3■□□□□ 0.04
RPGR-207ENST00000476559 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
RPGR-207ENST00000476559 E2F4Q16254 413 aa15.27■□□□□ 0.04
RPGR-207ENST00000476559 AXIN2Q9Y2T1 843 aa15.26■□□□□ 0.03
RPGR-207ENST00000476559 PPP4R3BQ5MIZ7 849 aa15.25■□□□□ 0.03
RPGR-207ENST00000476559 ZNF454Q8N9F8 522 aa15.25■□□□□ 0.03
RPGR-207ENST00000476559 ANO8Q9HCE9 1232 aaPredicted RBP15.25■□□□□ 0.03
RPGR-207ENST00000476559 POTEEQ6S8J3 1075 aa15.23■□□□□ 0.03
RPGR-207ENST00000476559 SPNS2Q8IVW8 549 aa15.22■□□□□ 0.03
RPGR-207ENST00000476559 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
RPGR-207ENST00000476559 FOSBP53539 338 aa15.19■□□□□ 0.02
RPGR-207ENST00000476559 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
RPGR-207ENST00000476559 PBX2P40425 430 aa15.18■□□□□ 0.02
RPGR-207ENST00000476559 LSM11P83369 360 aaKnown RBP eCLIP15.16■□□□□ 0.02
RPGR-207ENST00000476559 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
RPGR-207ENST00000476559 ARHGAP33O14559 1287 aa15.15■□□□□ 0.02
RPGR-207ENST00000476559 PSEN2P49810 448 aa15.15■□□□□ 0.02
RPGR-207ENST00000476559 KCNK17Q96T54 332 aa15.13■□□□□ 0.01
RPGR-207ENST00000476559 ZDHHC16Q969W1 377 aa15.11■□□□□ 0.01
RPGR-207ENST00000476559 PCDHGA10Q9Y5H3 936 aa15.11■□□□□ 0.01
RPGR-207ENST00000476559 PDIA6Q15084 440 aa15.1■□□□□ 0.01
RPGR-207ENST00000476559 DMRTA1Q5VZB9 504 aa15.1■□□□□ 0.01
RPGR-207ENST00000476559 DDX12PQ92771 950 aa15.1■□□□□ 0.01
RPGR-207ENST00000476559 MMRN1Q13201 1228 aa15.09■□□□□ 0.01
RPGR-207ENST00000476559 ADAM33Q9BZ11 813 aa15.09■□□□□ 0.01
RPGR-207ENST00000476559 BCL2L12Q9HB09 334 aa15.08■□□□□ 0
RPGR-207ENST00000476559 ARIH1Q9Y4X5 557 aaPredicted RBP15.08■□□□□ 0
RPGR-207ENST00000476559 SPDYE16A6NNV3 312 aaPredicted RBP15.07■□□□□ 0
RPGR-207ENST00000476559 KCNV2Q8TDN2 545 aa15.07■□□□□ 0
RPGR-207ENST00000476559 PHF14O94880 888 aa15.06■□□□□ 0
RPGR-207ENST00000476559 KCNH8Q96L42 1107 aa15.06■□□□□ 0
RPGR-207ENST00000476559 PTPREP23469 700 aa15.04■□□□□ -0
RPGR-207ENST00000476559 TYW1BQ6NUM6 668 aa15.04■□□□□ -0
RPGR-207ENST00000476559 PTGER2P43116 358 aa15.03■□□□□ -0
RPGR-207ENST00000476559 ADGRD1Q6QNK2 874 aa15.01□□□□□ -0.01
RPGR-207ENST00000476559 FBXW7Q969H0 707 aa15.01□□□□□ -0.01
RPGR-207ENST00000476559 RBM33Q96EV2 1170 aaKnown RBP15□□□□□ -0.01
RPGR-207ENST00000476559 EPAS1Q99814 870 aa15□□□□□ -0.01
RPGR-207ENST00000476559 GRXCR2A6NFK2 248 aa14.99□□□□□ -0.01
RPGR-207ENST00000476559 NBR1Q14596 966 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms