RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 DENND4BO75064 1496 aaPredicted RBP11.2□□□□□ -0.62
SP140-209ENST00000476126 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
SP140-209ENST00000476126 BCORL1Q5H9F3 1711 aa11.19□□□□□ -0.62
SP140-209ENST00000476126 ITSN2Q9NZM3 1697 aa11.19□□□□□ -0.62
SP140-209ENST00000476126 ZMYM4Q5VZL5 1548 aa11.19□□□□□ -0.62
SP140-209ENST00000476126 RAPGEF3O95398 923 aa11.18□□□□□ -0.62
SP140-209ENST00000476126 PLCH2O75038 1416 aa11.18□□□□□ -0.62
SP140-209ENST00000476126 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
SP140-209ENST00000476126 ZFYVE16Q7Z3T8 1539 aa11.17□□□□□ -0.62
SP140-209ENST00000476126 ADAMTSL3P82987 1691 aa11.16□□□□□ -0.62
SP140-209ENST00000476126 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
SP140-209ENST00000476126 MADDQ8WXG6 1647 aa11.16□□□□□ -0.62
SP140-209ENST00000476126 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
SP140-209ENST00000476126 HECW2Q9P2P5 1572 aa11.15□□□□□ -0.62
SP140-209ENST00000476126 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
SP140-209ENST00000476126 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
SP140-209ENST00000476126 SIGLEC1Q9BZZ2 1709 aa11.14□□□□□ -0.63
SP140-209ENST00000476126 EHBP1L1Q8N3D4 1523 aa11.14□□□□□ -0.63
SP140-209ENST00000476126 ABCC1P33527 1531 aa11.13□□□□□ -0.63
SP140-209ENST00000476126 SUPT6HQ7KZ85 1726 aaKnown RBP11.12□□□□□ -0.63
SP140-209ENST00000476126 ARID4BQ4LE39 1312 aaPredicted RBP11.12□□□□□ -0.63
SP140-209ENST00000476126 EFCAB2Q5VUJ9 269 aa11.12□□□□□ -0.63
SP140-209ENST00000476126 ZNF518AQ6AHZ1 1483 aa11.12□□□□□ -0.63
SP140-209ENST00000476126 KDM5CP41229 1560 aa11.11□□□□□ -0.63
SP140-209ENST00000476126 MAGI2Q86UL8 1455 aa11.11□□□□□ -0.63
SP140-209ENST00000476126 SAMD9LQ8IVG5 1584 aa11.11□□□□□ -0.63
SP140-209ENST00000476126 ABCA6Q8N139 1617 aa11.1□□□□□ -0.63
SP140-209ENST00000476126 MTUS2Q5JR59 1369 aa11.1□□□□□ -0.63
SP140-209ENST00000476126 YEATS2Q9ULM3 1422 aa11.09□□□□□ -0.63
SP140-209ENST00000476126 MYT1LQ9UL68 1186 aa11.09□□□□□ -0.63
SP140-209ENST00000476126 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
SP140-209ENST00000476126 DIP2CQ9Y2E4 1556 aa11.08□□□□□ -0.64
SP140-209ENST00000476126 SYCP2Q9BX26 1530 aa11.08□□□□□ -0.64
SP140-209ENST00000476126 KIDINS220Q9ULH0 1771 aa11.08□□□□□ -0.64
SP140-209ENST00000476126 PLPPR3Q6T4P5 718 aa11.07□□□□□ -0.64
SP140-209ENST00000476126 C9orf84Q5VXU9 1444 aa11.07□□□□□ -0.64
SP140-209ENST00000476126 PTPRMP28827 1452 aa11.06□□□□□ -0.64
SP140-209ENST00000476126 CCNB3Q8WWL7 1395 aa11.05□□□□□ -0.64
SP140-209ENST00000476126 LOC105371045A0A1W2PR82 267 aa11.05□□□□□ -0.64
SP140-209ENST00000476126 VPS8Q8N3P4 1428 aa11.05□□□□□ -0.64
SP140-209ENST00000476126 ZNF777Q9ULD5 760 aaPredicted RBP11.05□□□□□ -0.64
SP140-209ENST00000476126 ATP10AO60312 1499 aa11.05□□□□□ -0.64
SP140-209ENST00000476126 GPATCH8Q9UKJ3 1502 aaKnown RBP11.04□□□□□ -0.64
SP140-209ENST00000476126 ARHGEF12Q9NZN5 1544 aa11.04□□□□□ -0.64
SP140-209ENST00000476126 REREQ9P2R6 1566 aa11.03□□□□□ -0.64
SP140-209ENST00000476126 PLEKHH2Q8IVE3 1493 aa11.03□□□□□ -0.64
SP140-209ENST00000476126 ADGBQ8N7X0 1667 aa11.03□□□□□ -0.64
SP140-209ENST00000476126 INO80Q9ULG1 1556 aaPredicted RBP11.03□□□□□ -0.64
SP140-209ENST00000476126 TRAPPC8Q9Y2L5 1435 aa11.02□□□□□ -0.64
SP140-209ENST00000476126 MLH3Q9UHC1 1453 aa11.02□□□□□ -0.65
SP140-209ENST00000476126 MLECQ14165 292 aa11.02□□□□□ -0.65
SP140-209ENST00000476126 AFAP1Q8N556 730 aa11.02□□□□□ -0.65
SP140-209ENST00000476126 ATP7AQ04656 1500 aa11.02□□□□□ -0.65
SP140-209ENST00000476126 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
SP140-209ENST00000476126 NCOA2Q15596 1464 aa11□□□□□ -0.65
SP140-209ENST00000476126 CFDP1Q9UEE9 299 aaPredicted RBP11□□□□□ -0.65
SP140-209ENST00000476126 C3P01024 1663 aa11□□□□□ -0.65
SP140-209ENST00000476126 LRRC9Q6ZRR7 1453 aa10.98□□□□□ -0.65
SP140-209ENST00000476126 CAMSAP2Q08AD1 1489 aa10.97□□□□□ -0.65
SP140-209ENST00000476126 MROH2AA6NES4 1674 aa10.97□□□□□ -0.65
SP140-209ENST00000476126 CLTCQ00610 1675 aaKnown RBP10.97□□□□□ -0.65
SP140-209ENST00000476126 AGLP35573 1532 aa10.96□□□□□ -0.65
SP140-209ENST00000476126 MAP3K1Q13233 1512 aa10.96□□□□□ -0.65
SP140-209ENST00000476126 KIAA1107Q9UPP5 1409 aa10.96□□□□□ -0.65
SP140-209ENST00000476126 SPAG9O60271 1321 aaKnown RBP10.96□□□□□ -0.65
SP140-209ENST00000476126 HNRNPMP52272 730 aaKnown RBP eCLIP10.96□□□□□ -0.65
SP140-209ENST00000476126 PLXNC1O60486 1568 aa10.94□□□□□ -0.66
SP140-209ENST00000476126 SETD1BQ9UPS6 1966 aaKnown RBP10.94□□□□□ -0.66
SP140-209ENST00000476126 APLP2Q06481 763 aa10.94□□□□□ -0.66
SP140-209ENST00000476126 CROCC2H7BZ55 1655 aa10.94□□□□□ -0.66
SP140-209ENST00000476126 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
SP140-209ENST00000476126 CCDC141Q6ZP82 1450 aa10.93□□□□□ -0.66
SP140-209ENST00000476126 LMTK3Q96Q04 1460 aa10.93□□□□□ -0.66
SP140-209ENST00000476126 ESF1Q9H501 851 aaKnown RBP10.93□□□□□ -0.66
SP140-209ENST00000476126 A2MP01023 1474 aa10.93□□□□□ -0.66
SP140-209ENST00000476126 ZNF644Q9H582 1327 aaPredicted RBP10.91□□□□□ -0.66
SP140-209ENST00000476126 MBD5Q9P267 1494 aa10.9□□□□□ -0.66
SP140-209ENST00000476126 PTPN23Q9H3S7 1636 aa10.9□□□□□ -0.66
SP140-209ENST00000476126 MYOM3Q5VTT5 1437 aa10.89□□□□□ -0.67
SP140-209ENST00000476126 CNTLNQ9NXG0 1405 aa10.89□□□□□ -0.67
SP140-209ENST00000476126 MAST1Q9Y2H9 1570 aa10.89□□□□□ -0.67
SP140-209ENST00000476126 RTEL1-TNFRSF6BF6WH68 1400 aa10.88□□□□□ -0.67
SP140-209ENST00000476126 UHRF1BP1Q6BDS2 1440 aa10.87□□□□□ -0.67
SP140-209ENST00000476126 KANK4Q5T7N3 995 aaPredicted RBP10.87□□□□□ -0.67
SP140-209ENST00000476126 MYO3AQ8NEV4 1616 aa10.87□□□□□ -0.67
SP140-209ENST00000476126 EIF2AK4Q9P2K8 1649 aaKnown RBP10.87□□□□□ -0.67
SP140-209ENST00000476126 MIA2Q96PC5 1412 aa10.86□□□□□ -0.67
SP140-209ENST00000476126 CEBPAP49715 358 aaPredicted RBP10.86□□□□□ -0.67
SP140-209ENST00000476126 DNMT1P26358 1616 aaKnown RBP10.86□□□□□ -0.67
SP140-209ENST00000476126 CEP152O94986 1710 aa10.86□□□□□ -0.67
SP140-209ENST00000476126 ZNF142P52746 1687 aaPredicted RBP10.85□□□□□ -0.67
SP140-209ENST00000476126 ZC3H13Q5T200 1668 aaKnown RBP10.85□□□□□ -0.67
SP140-209ENST00000476126 CFAP65Q6ZU64 1925 aaKnown RBP10.85□□□□□ -0.67
SP140-209ENST00000476126 STRCQ7RTU9 1775 aa10.85□□□□□ -0.67
SP140-209ENST00000476126 HSPA2P54652 639 aa10.84□□□□□ -0.67
SP140-209ENST00000476126 RSPH4AQ5TD94 716 aa10.84□□□□□ -0.67
SP140-209ENST00000476126 GGT6Q6P531 493 aa10.84□□□□□ -0.67
SP140-209ENST00000476126 RNF17Q9BXT8 1623 aaKnown RBP10.84□□□□□ -0.67
SP140-209ENST00000476126 KDM5DQ9BY66 1539 aa10.84□□□□□ -0.67
SP140-209ENST00000476126 TSPY4P0CV99 314 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms