RNA–Protein interactions for RNA: ENST00000475916.1

SLF1-204, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-204ENST00000475916 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
SLF1-204ENST00000475916 TTLL13PA6NNM8 815 aa11.77□□□□□ -0.53
SLF1-204ENST00000475916 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.53
SLF1-204ENST00000475916 G3V3G9 751 aa11.76□□□□□ -0.53
SLF1-204ENST00000475916 AK7Q96M32 723 aa11.76□□□□□ -0.53
SLF1-204ENST00000475916 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
SLF1-204ENST00000475916 C19orf67A6NJJ6 358 aa11.75□□□□□ -0.53
SLF1-204ENST00000475916 CLCN6P51797 869 aa11.73□□□□□ -0.53
SLF1-204ENST00000475916 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
SLF1-204ENST00000475916 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
SLF1-204ENST00000475916 ILDR1Q86SU0 546 aaPredicted RBP11.71□□□□□ -0.53
SLF1-204ENST00000475916 DPYSL4O14531 572 aa11.7□□□□□ -0.54
SLF1-204ENST00000475916 MLLT3P42568 568 aaPredicted RBP11.7□□□□□ -0.54
SLF1-204ENST00000475916 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
SLF1-204ENST00000475916 ARXQ96QS3 562 aa11.68□□□□□ -0.54
SLF1-204ENST00000475916 DSG2Q14126 1118 aa11.67□□□□□ -0.54
SLF1-204ENST00000475916 MICALL2Q8IY33 904 aa11.67□□□□□ -0.54
SLF1-204ENST00000475916 FOXK1P85037 733 aa11.66□□□□□ -0.54
SLF1-204ENST00000475916 PDIA6Q15084 440 aa11.66□□□□□ -0.54
SLF1-204ENST00000475916 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
SLF1-204ENST00000475916 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
SLF1-204ENST00000475916 DPY19L2Q6NUT2 758 aa11.61□□□□□ -0.55
SLF1-204ENST00000475916 PLPP6Q8IY26 295 aa11.61□□□□□ -0.55
SLF1-204ENST00000475916 OCEL1Q9H607 264 aa11.61□□□□□ -0.55
SLF1-204ENST00000475916 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
SLF1-204ENST00000475916 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
SLF1-204ENST00000475916 IER5LQ5T953 404 aa11.59□□□□□ -0.55
SLF1-204ENST00000475916 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
SLF1-204ENST00000475916 HAX1O00165 279 aa11.57□□□□□ -0.56
SLF1-204ENST00000475916 PLCG2P16885 1265 aa11.57□□□□□ -0.56
SLF1-204ENST00000475916 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
SLF1-204ENST00000475916 GRXCR2A6NFK2 248 aa11.56□□□□□ -0.56
SLF1-204ENST00000475916 TRIM66O15016 1216 aa11.56□□□□□ -0.56
SLF1-204ENST00000475916 IL27Q8NEV9 243 aa11.56□□□□□ -0.56
SLF1-204ENST00000475916 C2orf72A6NCS6 295 aa11.55□□□□□ -0.56
SLF1-204ENST00000475916 PDE4DQ08499 809 aa11.55□□□□□ -0.56
SLF1-204ENST00000475916 PDCD7Q8N8D1 485 aaKnown RBP11.55□□□□□ -0.56
SLF1-204ENST00000475916 KDM4CQ9H3R0 1056 aa11.55□□□□□ -0.56
SLF1-204ENST00000475916 GPBP1L1Q9HC44 474 aaPredicted RBP11.55□□□□□ -0.56
SLF1-204ENST00000475916 TBC1D12O60347 775 aa11.54□□□□□ -0.56
SLF1-204ENST00000475916 MINK1Q8N4C8 1332 aaPredicted RBP11.54□□□□□ -0.56
SLF1-204ENST00000475916 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
SLF1-204ENST00000475916 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
SLF1-204ENST00000475916 TMEM121BQ9BXQ6 578 aaPredicted RBP11.53□□□□□ -0.56
SLF1-204ENST00000475916 IRX5P78411 483 aaPredicted RBP11.52□□□□□ -0.57
SLF1-204ENST00000475916 HOMEZQ8IX15 550 aa11.52□□□□□ -0.57
SLF1-204ENST00000475916 ATMINO43313 823 aaPredicted RBP11.49□□□□□ -0.57
SLF1-204ENST00000475916 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
SLF1-204ENST00000475916 KIF3CO14782 793 aa11.48□□□□□ -0.57
SLF1-204ENST00000475916 SEC24BO95487 1268 aa11.48□□□□□ -0.57
SLF1-204ENST00000475916 MAP2K5Q13163 448 aa11.48□□□□□ -0.57
SLF1-204ENST00000475916 FCHSD2O94868 740 aa11.47□□□□□ -0.57
SLF1-204ENST00000475916 ASTLQ6HA08 431 aaPredicted RBP11.47□□□□□ -0.57
SLF1-204ENST00000475916 GNPATO15228 680 aa11.45□□□□□ -0.58
SLF1-204ENST00000475916 HIC1Q14526 733 aa11.45□□□□□ -0.58
SLF1-204ENST00000475916 DDRGK1Q96HY6 314 aa11.45□□□□□ -0.58
SLF1-204ENST00000475916 IRF6O14896 467 aa11.44□□□□□ -0.58
SLF1-204ENST00000475916 PTGER2P43116 358 aa11.44□□□□□ -0.58
SLF1-204ENST00000475916 SUPT5HO00267 1087 aaKnown RBP11.42□□□□□ -0.58
SLF1-204ENST00000475916 GPR37O15354 613 aa11.42□□□□□ -0.58
SLF1-204ENST00000475916 OXER1Q8TDS5 423 aa11.42□□□□□ -0.58
SLF1-204ENST00000475916 DDX12PQ92771 950 aa11.42□□□□□ -0.58
SLF1-204ENST00000475916 CCDC102AQ96A19 550 aa11.42□□□□□ -0.58
SLF1-204ENST00000475916 OSBPP22059 807 aa11.41□□□□□ -0.58
SLF1-204ENST00000475916 EVI5O60447 810 aa11.39□□□□□ -0.59
SLF1-204ENST00000475916 TTLL12Q14166 644 aaPredicted RBP11.38□□□□□ -0.59
SLF1-204ENST00000475916 AMHR2Q16671 573 aa11.38□□□□□ -0.59
SLF1-204ENST00000475916 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
SLF1-204ENST00000475916 C3orf67Q6ZVT6 689 aa11.36□□□□□ -0.59
SLF1-204ENST00000475916 FAM117AQ9C073 453 aa11.36□□□□□ -0.59
SLF1-204ENST00000475916 ZMYND15Q9H091 742 aa11.36□□□□□ -0.59
SLF1-204ENST00000475916 SLC39A7Q92504 469 aa11.32□□□□□ -0.6
SLF1-204ENST00000475916 RSPH6AQ9H0K4 717 aa11.32□□□□□ -0.6
SLF1-204ENST00000475916 EVX2Q03828 476 aa11.31□□□□□ -0.6
SLF1-204ENST00000475916 PTGDRQ13258 359 aa11.31□□□□□ -0.6
SLF1-204ENST00000475916 PARP9Q8IXQ6 854 aa11.31□□□□□ -0.6
SLF1-204ENST00000475916 PTCD2Q8WV60 388 aaKnown RBP11.31□□□□□ -0.6
SLF1-204ENST00000475916 EPAS1Q99814 870 aa11.3□□□□□ -0.6
SLF1-204ENST00000475916 C7P10643 843 aa11.29□□□□□ -0.6
SLF1-204ENST00000475916 TMEM92Q6UXU6 159 aa11.29□□□□□ -0.6
SLF1-204ENST00000475916 FLIIQ13045 1269 aa11.28□□□□□ -0.6
SLF1-204ENST00000475916 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
SLF1-204ENST00000475916 MAP3K7O43318 606 aa11.27□□□□□ -0.61
SLF1-204ENST00000475916 FECHP22830 423 aa11.27□□□□□ -0.61
SLF1-204ENST00000475916 GOPCQ9HD26 462 aa11.27□□□□□ -0.61
SLF1-204ENST00000475916 GABBR2O75899 941 aa11.26□□□□□ -0.61
SLF1-204ENST00000475916 PHF14O94880 888 aa11.26□□□□□ -0.61
SLF1-204ENST00000475916 PCMTD1Q96MG8 357 aaPredicted RBP11.26□□□□□ -0.61
SLF1-204ENST00000475916 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
SLF1-204ENST00000475916 SLC34A2O95436 690 aa11.25□□□□□ -0.61
SLF1-204ENST00000475916 ANO8Q9HCE9 1232 aaPredicted RBP11.25□□□□□ -0.61
SLF1-204ENST00000475916 COLQQ9Y215 455 aaPredicted RBP11.25□□□□□ -0.61
SLF1-204ENST00000475916 CLCN1P35523 988 aa11.24□□□□□ -0.61
SLF1-204ENST00000475916 GIGYF2Q6Y7W6 1299 aaKnown RBP11.24□□□□□ -0.61
SLF1-204ENST00000475916 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
SLF1-204ENST00000475916 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
SLF1-204ENST00000475916 TYW1BQ6NUM6 668 aa11.2□□□□□ -0.62
SLF1-204ENST00000475916 SLAIN1Q8ND83 568 aa11.2□□□□□ -0.62
SLF1-204ENST00000475916 FBXW7Q969H0 707 aa11.2□□□□□ -0.62
SLF1-204ENST00000475916 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms