RNA–Protein interactions for RNA: ENST00000475607.1

RABGAP1-209, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 4

Gene RABGAP1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-209ENST00000475607 G3V3G9 751 aa12.15□□□□□ -0.46
RABGAP1-209ENST00000475607 PDE4AP27815 886 aa12.14□□□□□ -0.47
RABGAP1-209ENST00000475607 POTEFA5A3E0 1075 aa12.13□□□□□ -0.47
RABGAP1-209ENST00000475607 MICALL2Q8IY33 904 aa12.13□□□□□ -0.47
RABGAP1-209ENST00000475607 L3MBTL3Q96JM7 780 aaPredicted RBP12.13□□□□□ -0.47
RABGAP1-209ENST00000475607 BOLA1Q9Y3E2 137 aa12.13□□□□□ -0.47
RABGAP1-209ENST00000475607 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
RABGAP1-209ENST00000475607 P3H3Q8IVL6 736 aa12.11□□□□□ -0.47
RABGAP1-209ENST00000475607 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
RABGAP1-209ENST00000475607 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
RABGAP1-209ENST00000475607 CRISPLD2Q9H0B8 497 aa12.1□□□□□ -0.47
RABGAP1-209ENST00000475607 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-209ENST00000475607 TMEM121BQ9BXQ6 578 aaPredicted RBP12.09□□□□□ -0.47
RABGAP1-209ENST00000475607 PCDH10Q9P2E7 1040 aa12.09□□□□□ -0.47
RABGAP1-209ENST00000475607 NBR1Q14596 966 aa12.06□□□□□ -0.48
RABGAP1-209ENST00000475607 DDX27Q96GQ7 796 aaKnown RBP12.06□□□□□ -0.48
RABGAP1-209ENST00000475607 MFSD10Q14728 455 aa12.05□□□□□ -0.48
RABGAP1-209ENST00000475607 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
RABGAP1-209ENST00000475607 E2F4Q16254 413 aa12.03□□□□□ -0.48
RABGAP1-209ENST00000475607 TMC2Q8TDI7 906 aa12.03□□□□□ -0.48
RABGAP1-209ENST00000475607 KCNV2Q8TDN2 545 aa12□□□□□ -0.49
RABGAP1-209ENST00000475607 SLAIN1Q8ND83 568 aa11.98□□□□□ -0.49
RABGAP1-209ENST00000475607 PPP1R15BQ5SWA1 713 aa11.97□□□□□ -0.49
RABGAP1-209ENST00000475607 LCE2DQ5TA82 110 aaPredicted RBP11.96□□□□□ -0.49
RABGAP1-209ENST00000475607 C3orf67Q6ZVT6 689 aa11.96□□□□□ -0.49
RABGAP1-209ENST00000475607 ARHGEF1Q92888 912 aaKnown RBP11.96□□□□□ -0.49
RABGAP1-209ENST00000475607 C2orf72A6NCS6 295 aa11.94□□□□□ -0.5
RABGAP1-209ENST00000475607 FOXK1P85037 733 aa11.94□□□□□ -0.5
RABGAP1-209ENST00000475607 KIF3CO14782 793 aa11.93□□□□□ -0.5
RABGAP1-209ENST00000475607 CAMK2BQ13554 666 aa11.93□□□□□ -0.5
RABGAP1-209ENST00000475607 DSG2Q14126 1118 aa11.93□□□□□ -0.5
RABGAP1-209ENST00000475607 TMEM92Q6UXU6 159 aa11.89□□□□□ -0.51
RABGAP1-209ENST00000475607 PLPP6Q8IY26 295 aa11.89□□□□□ -0.51
RABGAP1-209ENST00000475607 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
RABGAP1-209ENST00000475607 ARIH1Q9Y4X5 557 aaPredicted RBP11.88□□□□□ -0.51
RABGAP1-209ENST00000475607 SNPHO15079 494 aa11.82□□□□□ -0.52
RABGAP1-209ENST00000475607 ST18O60284 1047 aa11.81□□□□□ -0.52
RABGAP1-209ENST00000475607 CDAN1Q8IWY9 1227 aa11.81□□□□□ -0.52
RABGAP1-209ENST00000475607 EMILIN3Q9NT22 766 aa11.81□□□□□ -0.52
RABGAP1-209ENST00000475607 TULP1O00294 542 aaPredicted RBP11.79□□□□□ -0.52
RABGAP1-209ENST00000475607 DPYSL4O14531 572 aa11.77□□□□□ -0.53
RABGAP1-209ENST00000475607 SEMA3EO15041 775 aa11.76□□□□□ -0.53
RABGAP1-209ENST00000475607 SPDYE16A6NNV3 312 aaPredicted RBP11.75□□□□□ -0.53
RABGAP1-209ENST00000475607 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
RABGAP1-209ENST00000475607 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
RABGAP1-209ENST00000475607 SMYD5Q6GMV2 418 aa11.73□□□□□ -0.53
RABGAP1-209ENST00000475607 UPF1Q92900 1129 aaKnown RBP eCLIP11.73□□□□□ -0.53
RABGAP1-209ENST00000475607 PDIA6Q15084 440 aa11.72□□□□□ -0.53
RABGAP1-209ENST00000475607 OXER1Q8TDS5 423 aa11.72□□□□□ -0.53
RABGAP1-209ENST00000475607 TBC1D12O60347 775 aa11.71□□□□□ -0.53
RABGAP1-209ENST00000475607 SLC34A2O95436 690 aa11.71□□□□□ -0.53
RABGAP1-209ENST00000475607 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
RABGAP1-209ENST00000475607 PTCD2Q8WV60 388 aaKnown RBP11.7□□□□□ -0.54
RABGAP1-209ENST00000475607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
RABGAP1-209ENST00000475607 LMOD2Q6P5Q4 547 aa11.67□□□□□ -0.54
RABGAP1-209ENST00000475607 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
RABGAP1-209ENST00000475607 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
RABGAP1-209ENST00000475607 EVI5O60447 810 aa11.63□□□□□ -0.55
RABGAP1-209ENST00000475607 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
RABGAP1-209ENST00000475607 MARVELD3Q96A59 401 aa11.63□□□□□ -0.55
RABGAP1-209ENST00000475607 MLLT3P42568 568 aaPredicted RBP11.62□□□□□ -0.55
RABGAP1-209ENST00000475607 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
RABGAP1-209ENST00000475607 EMP3P54852 163 aa11.6□□□□□ -0.55
RABGAP1-209ENST00000475607 RIMBP2O15034 1052 aa11.59□□□□□ -0.55
RABGAP1-209ENST00000475607 PTGER2P43116 358 aa11.59□□□□□ -0.55
RABGAP1-209ENST00000475607 GRXCR2A6NFK2 248 aa11.57□□□□□ -0.56
RABGAP1-209ENST00000475607 ANO8Q9HCE9 1232 aaPredicted RBP11.57□□□□□ -0.56
RABGAP1-209ENST00000475607 HOXB3P14651 431 aaPredicted RBP11.56□□□□□ -0.56
RABGAP1-209ENST00000475607 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
RABGAP1-209ENST00000475607 ZNF710Q8N1W2 664 aa11.55□□□□□ -0.56
RABGAP1-209ENST00000475607 DDX12PQ92771 950 aa11.54□□□□□ -0.56
RABGAP1-209ENST00000475607 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
RABGAP1-209ENST00000475607 ARSIQ5FYB1 569 aa11.5□□□□□ -0.57
RABGAP1-209ENST00000475607 SPNS2Q8IVW8 549 aa11.5□□□□□ -0.57
RABGAP1-209ENST00000475607 ZC3H15Q8WU90 426 aaKnown RBP11.5□□□□□ -0.57
RABGAP1-209ENST00000475607 KDM4FA0A1W2PPD8 638 aa11.49□□□□□ -0.57
RABGAP1-209ENST00000475607 OSBPP22059 807 aa11.49□□□□□ -0.57
RABGAP1-209ENST00000475607 GPIHBP1Q8IV16 184 aa11.49□□□□□ -0.57
RABGAP1-209ENST00000475607 FAM205CA6NFA0 338 aa11.48□□□□□ -0.57
RABGAP1-209ENST00000475607 PHF14O94880 888 aa11.48□□□□□ -0.57
RABGAP1-209ENST00000475607 MMRN1Q13201 1228 aa11.48□□□□□ -0.57
RABGAP1-209ENST00000475607 GPR153Q6NV75 609 aa11.48□□□□□ -0.57
RABGAP1-209ENST00000475607 NUDT7P0C024 238 aa11.47□□□□□ -0.57
RABGAP1-209ENST00000475607 EPAS1Q99814 870 aa11.47□□□□□ -0.57
RABGAP1-209ENST00000475607 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
RABGAP1-209ENST00000475607 KHSRPQ92945 711 aaKnown RBP eCLIP11.45□□□□□ -0.58
RABGAP1-209ENST00000475607 JPH4Q96JJ6 628 aa11.44□□□□□ -0.58
RABGAP1-209ENST00000475607 NUTM2FA1L443 756 aa11.43□□□□□ -0.58
RABGAP1-209ENST00000475607 PCDHGA10Q9Y5H3 936 aa11.43□□□□□ -0.58
RABGAP1-209ENST00000475607 ZMYND10O75800 440 aa11.42□□□□□ -0.58
RABGAP1-209ENST00000475607 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
RABGAP1-209ENST00000475607 TYW1BQ6NUM6 668 aa11.42□□□□□ -0.58
RABGAP1-209ENST00000475607 FBXW7Q969H0 707 aa11.42□□□□□ -0.58
RABGAP1-209ENST00000475607 FOSBP53539 338 aa11.4□□□□□ -0.58
RABGAP1-209ENST00000475607 EN1Q05925 392 aaPredicted RBP11.4□□□□□ -0.58
RABGAP1-209ENST00000475607 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
RABGAP1-209ENST00000475607 PSDA5PKW4 1024 aaPredicted RBP11.38□□□□□ -0.59
RABGAP1-209ENST00000475607 MAP3K7O43318 606 aa11.38□□□□□ -0.59
RABGAP1-209ENST00000475607 PRIM1P49642 420 aaKnown RBP11.38□□□□□ -0.59
RABGAP1-209ENST00000475607 BARGINQ6ZT62 677 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms