RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 LARP6Q9BRS8 491 aaKnown RBP13.65□□□□□ -0.22
TM9SF3-204ENST00000475401 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
TM9SF3-204ENST00000475401 NCKAP5LQ9HCH0 1330 aa13.62□□□□□ -0.23
TM9SF3-204ENST00000475401 DDX27Q96GQ7 796 aaKnown RBP13.61□□□□□ -0.23
TM9SF3-204ENST00000475401 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.61□□□□□ -0.23
TM9SF3-204ENST00000475401 GPHNQ9NQX3 736 aaPredicted RBP13.6□□□□□ -0.23
TM9SF3-204ENST00000475401 P3H3Q8IVL6 736 aa13.59□□□□□ -0.23
TM9SF3-204ENST00000475401 MAMSTRQ6ZN01 415 aa13.57□□□□□ -0.24
TM9SF3-204ENST00000475401 MFSD10Q14728 455 aa13.55□□□□□ -0.24
TM9SF3-204ENST00000475401 SCUBE2Q9NQ36 999 aa13.55□□□□□ -0.24
TM9SF3-204ENST00000475401 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
TM9SF3-204ENST00000475401 PPP1R15BQ5SWA1 713 aa13.53□□□□□ -0.24
TM9SF3-204ENST00000475401 E2F4Q16254 413 aa13.52□□□□□ -0.25
TM9SF3-204ENST00000475401 FOXK1P85037 733 aa13.51□□□□□ -0.25
TM9SF3-204ENST00000475401 DSG2Q14126 1118 aa13.49□□□□□ -0.25
TM9SF3-204ENST00000475401 KIF3CO14782 793 aa13.48□□□□□ -0.25
TM9SF3-204ENST00000475401 POTEB2H3BUK9 544 aa13.47□□□□□ -0.25
TM9SF3-204ENST00000475401 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
TM9SF3-204ENST00000475401 BCANQ96GW7 911 aa13.47□□□□□ -0.25
TM9SF3-204ENST00000475401 NBR1Q14596 966 aa13.46□□□□□ -0.25
TM9SF3-204ENST00000475401 TMEM92Q6UXU6 159 aa13.46□□□□□ -0.25
TM9SF3-204ENST00000475401 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
TM9SF3-204ENST00000475401 SLAIN1Q8ND83 568 aa13.43□□□□□ -0.26
TM9SF3-204ENST00000475401 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
TM9SF3-204ENST00000475401 ARHGEF1Q92888 912 aaKnown RBP13.41□□□□□ -0.26
TM9SF3-204ENST00000475401 CAMK2BQ13554 666 aa13.4□□□□□ -0.26
TM9SF3-204ENST00000475401 LHX8Q68G74 356 aa13.39□□□□□ -0.27
TM9SF3-204ENST00000475401 TBC1D12O60347 775 aa13.32□□□□□ -0.28
TM9SF3-204ENST00000475401 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
TM9SF3-204ENST00000475401 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
TM9SF3-204ENST00000475401 DOK7Q18PE1 504 aa13.3□□□□□ -0.28
TM9SF3-204ENST00000475401 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
TM9SF3-204ENST00000475401 EMILIN3Q9NT22 766 aa13.3□□□□□ -0.28
TM9SF3-204ENST00000475401 RIMBP2O15034 1052 aa13.29□□□□□ -0.28
TM9SF3-204ENST00000475401 SNPHO15079 494 aa13.29□□□□□ -0.28
TM9SF3-204ENST00000475401 ZNF316A6NFI3 1004 aaPredicted RBP13.28□□□□□ -0.28
TM9SF3-204ENST00000475401 DPYSL4O14531 572 aa13.28□□□□□ -0.28
TM9SF3-204ENST00000475401 SLC34A2O95436 690 aa13.27□□□□□ -0.29
TM9SF3-204ENST00000475401 OTUD5Q96G74 571 aa13.27□□□□□ -0.29
TM9SF3-204ENST00000475401 SPDYE16A6NNV3 312 aaPredicted RBP13.26□□□□□ -0.29
TM9SF3-204ENST00000475401 TULP1O00294 542 aaPredicted RBP13.26□□□□□ -0.29
TM9SF3-204ENST00000475401 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
TM9SF3-204ENST00000475401 ZNF710Q8N1W2 664 aa13.25□□□□□ -0.29
TM9SF3-204ENST00000475401 PTCD2Q8WV60 388 aaKnown RBP13.24□□□□□ -0.29
TM9SF3-204ENST00000475401 PDIA6Q15084 440 aa13.2□□□□□ -0.3
TM9SF3-204ENST00000475401 SMYD5Q6GMV2 418 aa13.19□□□□□ -0.3
TM9SF3-204ENST00000475401 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
TM9SF3-204ENST00000475401 PCDHGA4Q9Y5G9 962 aa13.18□□□□□ -0.3
TM9SF3-204ENST00000475401 SEMA3EO15041 775 aa13.17□□□□□ -0.3
TM9SF3-204ENST00000475401 EVI5O60447 810 aa13.17□□□□□ -0.3
TM9SF3-204ENST00000475401 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
TM9SF3-204ENST00000475401 TESPA1A2RU30 521 aaPredicted RBP13.12□□□□□ -0.31
TM9SF3-204ENST00000475401 ARSIQ5FYB1 569 aa13.1□□□□□ -0.31
TM9SF3-204ENST00000475401 GRXCR2A6NFK2 248 aa13.07□□□□□ -0.32
TM9SF3-204ENST00000475401 NUDT7P0C024 238 aa13.06□□□□□ -0.32
TM9SF3-204ENST00000475401 PTGER2P43116 358 aa13.06□□□□□ -0.32
TM9SF3-204ENST00000475401 GPR153Q6NV75 609 aa13.06□□□□□ -0.32
TM9SF3-204ENST00000475401 ANO8Q9HCE9 1232 aaPredicted RBP13.06□□□□□ -0.32
TM9SF3-204ENST00000475401 MLLT3P42568 568 aaPredicted RBP13.04□□□□□ -0.32
TM9SF3-204ENST00000475401 DDX12PQ92771 950 aa13.04□□□□□ -0.32
TM9SF3-204ENST00000475401 HOXB1P14653 301 aaPredicted RBP13.03□□□□□ -0.32
TM9SF3-204ENST00000475401 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.333e-6■□□□□ 8.4
TM9SF3-204ENST00000475401 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
TM9SF3-204ENST00000475401 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
TM9SF3-204ENST00000475401 PHF14O94880 888 aa12.99□□□□□ -0.33
TM9SF3-204ENST00000475401 EPAS1Q99814 870 aa12.99□□□□□ -0.33
TM9SF3-204ENST00000475401 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
TM9SF3-204ENST00000475401 PSDA5PKW4 1024 aaPredicted RBP12.98□□□□□ -0.33
TM9SF3-204ENST00000475401 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
TM9SF3-204ENST00000475401 JPH4Q96JJ6 628 aa12.97□□□□□ -0.33
TM9SF3-204ENST00000475401 ZNF454Q8N9F8 522 aa12.96□□□□□ -0.33
TM9SF3-204ENST00000475401 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
TM9SF3-204ENST00000475401 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
TM9SF3-204ENST00000475401 ST18O60284 1047 aa12.94□□□□□ -0.34
TM9SF3-204ENST00000475401 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
TM9SF3-204ENST00000475401 PPP4R3BQ5MIZ7 849 aa12.93□□□□□ -0.34
TM9SF3-204ENST00000475401 OSBPP22059 807 aa12.92□□□□□ -0.34
TM9SF3-204ENST00000475401 FOSBP53539 338 aa12.92□□□□□ -0.34
TM9SF3-204ENST00000475401 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
TM9SF3-204ENST00000475401 PCDHGA10Q9Y5H3 936 aa12.92□□□□□ -0.34
TM9SF3-204ENST00000475401 EMP3P54852 163 aa12.91□□□□□ -0.34
TM9SF3-204ENST00000475401 GPIHBP1Q8IV16 184 aa12.91□□□□□ -0.34
TM9SF3-204ENST00000475401 ZDHHC16Q969W1 377 aa12.91□□□□□ -0.34
TM9SF3-204ENST00000475401 ERBB3P21860 1342 aa12.9□□□□□ -0.34
TM9SF3-204ENST00000475401 NUTM2FA1L443 756 aa12.9□□□□□ -0.34
TM9SF3-204ENST00000475401 MAP3K7O43318 606 aa12.9□□□□□ -0.34
TM9SF3-204ENST00000475401 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
TM9SF3-204ENST00000475401 RBM33Q96EV2 1170 aaKnown RBP12.89□□□□□ -0.35
TM9SF3-204ENST00000475401 EN1Q05925 392 aaPredicted RBP12.88□□□□□ -0.35
TM9SF3-204ENST00000475401 MARVELD3Q96A59 401 aa12.86□□□□□ -0.35
TM9SF3-204ENST00000475401 KCNH8Q96L42 1107 aa12.85□□□□□ -0.35
TM9SF3-204ENST00000475401 VARS2Q5ST30 1063 aaKnown RBP12.82□□□□□ -0.36
TM9SF3-204ENST00000475401 FCHSD2O94868 740 aa12.81□□□□□ -0.36
TM9SF3-204ENST00000475401 ZC3H15Q8WU90 426 aaKnown RBP12.81□□□□□ -0.36
TM9SF3-204ENST00000475401 FAM205CA6NFA0 338 aa12.8□□□□□ -0.36
TM9SF3-204ENST00000475401 ADAM33Q9BZ11 813 aa12.8□□□□□ -0.36
TM9SF3-204ENST00000475401 PTPREP23469 700 aa12.79□□□□□ -0.36
TM9SF3-204ENST00000475401 C6orf132Q5T0Z8 1188 aa12.79□□□□□ -0.36
TM9SF3-204ENST00000475401 CERKQ8TCT0 537 aa12.79□□□□□ -0.36
TM9SF3-204ENST00000475401 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms