RNA–Protein interactions for RNA: ENST00000475364.1

CMTR1-205, Transcript of cap methyltransferase 1, humanhuman

TSL 5

Gene CMTR1, Length 1,032 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTR1-205ENST00000475364 ARHGAP5Q13017 1502 aa30■■■□□ 2.39
CMTR1-205ENST00000475364 ZFYVE16Q7Z3T8 1539 aa30■■■□□ 2.39
CMTR1-205ENST00000475364 PREX2Q70Z35 1606 aa29.99■■■□□ 2.39
CMTR1-205ENST00000475364 CDC42BPBQ9Y5S2 1711 aa29.99■■■□□ 2.39
CMTR1-205ENST00000475364 SCAPERQ9BY12 1400 aa29.97■■■□□ 2.39
CMTR1-205ENST00000475364 MAGI2Q86UL8 1455 aa29.95■■■□□ 2.39
CMTR1-205ENST00000475364 EFCAB2Q5VUJ9 269 aa29.94■■■□□ 2.38
CMTR1-205ENST00000475364 MADDQ8WXG6 1647 aa29.93■■■□□ 2.38
CMTR1-205ENST00000475364 CDC42BPAQ5VT25 1732 aa29.92■■■□□ 2.38
CMTR1-205ENST00000475364 HECW2Q9P2P5 1572 aa29.92■■■□□ 2.38
CMTR1-205ENST00000475364 YEATS2Q9ULM3 1422 aa29.92■■■□□ 2.38
CMTR1-205ENST00000475364 SIGLEC1Q9BZZ2 1709 aa29.91■■■□□ 2.38
CMTR1-205ENST00000475364 ARID4BQ4LE39 1312 aaPredicted RBP29.88■■■□□ 2.37
CMTR1-205ENST00000475364 KDM5CP41229 1560 aa29.87■■■□□ 2.37
CMTR1-205ENST00000475364 CEP162Q5TB80 1403 aa29.87■■■□□ 2.37
CMTR1-205ENST00000475364 ZNF518AQ6AHZ1 1483 aa29.87■■■□□ 2.37
CMTR1-205ENST00000475364 PTPRMP28827 1452 aa29.86■■■□□ 2.37
CMTR1-205ENST00000475364 ITSN2Q9NZM3 1697 aa29.85■■■□□ 2.37
CMTR1-205ENST00000475364 ABCC1P33527 1531 aa29.84■■■□□ 2.37
CMTR1-205ENST00000475364 RIMS1Q86UR5 1692 aaKnown RBP29.84■■■□□ 2.37
CMTR1-205ENST00000475364 C9orf84Q5VXU9 1444 aa29.77■■■□□ 2.36
CMTR1-205ENST00000475364 FER1L4A9Z1Z3 1794 aa29.77■■■□□ 2.36
CMTR1-205ENST00000475364 ATP10AO60312 1499 aa29.75■■■□□ 2.35
CMTR1-205ENST00000475364 DIP2CQ9Y2E4 1556 aa29.73■■■□□ 2.35
CMTR1-205ENST00000475364 ARHGEF12Q9NZN5 1544 aa29.73■■■□□ 2.35
CMTR1-205ENST00000475364 SAMD9LQ8IVG5 1584 aa29.73■■■□□ 2.35
CMTR1-205ENST00000475364 EHBP1L1Q8N3D4 1523 aa29.72■■■□□ 2.35
CMTR1-205ENST00000475364 ABCA6Q8N139 1617 aa29.72■■■□□ 2.35
CMTR1-205ENST00000475364 MTUS2Q5JR59 1369 aa29.71■■■□□ 2.35
CMTR1-205ENST00000475364 GPATCH8Q9UKJ3 1502 aaKnown RBP29.71■■■□□ 2.35
CMTR1-205ENST00000475364 AFAP1Q8N556 730 aa29.7■■■□□ 2.35
CMTR1-205ENST00000475364 TRAPPC8Q9Y2L5 1435 aa29.69■■■□□ 2.34
CMTR1-205ENST00000475364 REREQ9P2R6 1566 aa29.69■■■□□ 2.34
CMTR1-205ENST00000475364 MLH3Q9UHC1 1453 aa29.68■■■□□ 2.34
CMTR1-205ENST00000475364 SYCP2Q9BX26 1530 aa29.66■■■□□ 2.34
CMTR1-205ENST00000475364 KIDINS220Q9ULH0 1771 aa29.65■■■□□ 2.34
CMTR1-205ENST00000475364 TIAM1Q13009 1591 aa29.64■■■□□ 2.34
CMTR1-205ENST00000475364 MYT1LQ9UL68 1186 aa29.62■■■□□ 2.33
CMTR1-205ENST00000475364 CCNB3Q8WWL7 1395 aa29.62■■■□□ 2.33
CMTR1-205ENST00000475364 MLECQ14165 292 aa29.61■■■□□ 2.33
CMTR1-205ENST00000475364 PLEKHH2Q8IVE3 1493 aa29.59■■■□□ 2.33
CMTR1-205ENST00000475364 ZNF777Q9ULD5 760 aaPredicted RBP29.58■■■□□ 2.33
CMTR1-205ENST00000475364 SUPT6HQ7KZ85 1726 aaKnown RBP29.57■■■□□ 2.32
CMTR1-205ENST00000475364 LOC105371045A0A1W2PR82 267 aa29.56■■■□□ 2.32
CMTR1-205ENST00000475364 LMTK3Q96Q04 1460 aa29.55■■■□□ 2.32
CMTR1-205ENST00000475364 VPS8Q8N3P4 1428 aa29.54■■■□□ 2.32
CMTR1-205ENST00000475364 KIAA1107Q9UPP5 1409 aa29.54■■■□□ 2.32
CMTR1-205ENST00000475364 CFDP1Q9UEE9 299 aaPredicted RBP29.54■■■□□ 2.32
CMTR1-205ENST00000475364 AGLP35573 1532 aa29.54■■■□□ 2.32
CMTR1-205ENST00000475364 INO80Q9ULG1 1556 aaPredicted RBP29.53■■■□□ 2.32
CMTR1-205ENST00000475364 ATP7AQ04656 1500 aa29.51■■■□□ 2.32
CMTR1-205ENST00000475364 PLPPR3Q6T4P5 718 aa29.48■■■□□ 2.31
CMTR1-205ENST00000475364 NCOA2Q15596 1464 aa29.48■■■□□ 2.31
CMTR1-205ENST00000475364 HNRNPMP52272 730 aaKnown RBP eCLIP29.46■■■□□ 2.31
CMTR1-205ENST00000475364 SPAG9O60271 1321 aaKnown RBP29.45■■■□□ 2.3
CMTR1-205ENST00000475364 PREX1Q8TCU6 1659 aa29.44■■■□□ 2.3
CMTR1-205ENST00000475364 PLXNC1O60486 1568 aa29.42■■■□□ 2.3
CMTR1-205ENST00000475364 C3P01024 1663 aa29.41■■■□□ 2.3
CMTR1-205ENST00000475364 ADGBQ8N7X0 1667 aa29.4■■■□□ 2.3
CMTR1-205ENST00000475364 LRRC9Q6ZRR7 1453 aa29.39■■■□□ 2.3
CMTR1-205ENST00000475364 MBD5Q9P267 1494 aa29.38■■■□□ 2.29
CMTR1-205ENST00000475364 ZNF644Q9H582 1327 aaPredicted RBP29.38■■■□□ 2.29
CMTR1-205ENST00000475364 CAMSAP2Q08AD1 1489 aa29.37■■■□□ 2.29
CMTR1-205ENST00000475364 MAP3K1Q13233 1512 aa29.37■■■□□ 2.29
CMTR1-205ENST00000475364 A2MP01023 1474 aa29.34■■■□□ 2.29
CMTR1-205ENST00000475364 MROH2AA6NES4 1674 aa29.34■■■□□ 2.29
CMTR1-205ENST00000475364 SETD1BQ9UPS6 1966 aaKnown RBP29.33■■■□□ 2.29
CMTR1-205ENST00000475364 CNTLNQ9NXG0 1405 aa29.32■■■□□ 2.28
CMTR1-205ENST00000475364 CCDC141Q6ZP82 1450 aa29.31■■■□□ 2.28
CMTR1-205ENST00000475364 CEBPAP49715 358 aaPredicted RBP29.31■■■□□ 2.28
CMTR1-205ENST00000475364 HSPA2P54652 639 aa29.29■■■□□ 2.28
CMTR1-205ENST00000475364 ESF1Q9H501 851 aaKnown RBP29.29■■■□□ 2.28
CMTR1-205ENST00000475364 RTEL1-TNFRSF6BF6WH68 1400 aa29.28■■■□□ 2.28
CMTR1-205ENST00000475364 ARHGEF5Q12774 1597 aa29.27■■■□□ 2.28
CMTR1-205ENST00000475364 CLTCQ00610 1675 aaKnown RBP29.26■■■□□ 2.27
CMTR1-205ENST00000475364 UHRF1BP1Q6BDS2 1440 aa29.25■■■□□ 2.27
CMTR1-205ENST00000475364 KANK4Q5T7N3 995 aaPredicted RBP29.2■■■□□ 2.26
CMTR1-205ENST00000475364 ILDR1Q86SU0 546 aaPredicted RBP29.18■■■□□ 2.26
CMTR1-205ENST00000475364 MYOM3Q5VTT5 1437 aa29.18■■■□□ 2.26
CMTR1-205ENST00000475364 RSPH4AQ5TD94 716 aa29.16■■■□□ 2.26
CMTR1-205ENST00000475364 NPATQ14207 1427 aa29.14■■■□□ 2.26
CMTR1-205ENST00000475364 MIA2Q96PC5 1412 aa29.14■■■□□ 2.26
CMTR1-205ENST00000475364 DHX29Q7Z478 1369 aaKnown RBP29.13■■■□□ 2.25
CMTR1-205ENST00000475364 MAST1Q9Y2H9 1570 aa29.13■■■□□ 2.25
CMTR1-205ENST00000475364 STRCQ7RTU9 1775 aa29.13■■■□□ 2.25
CMTR1-205ENST00000475364 ZMYM3Q14202 1370 aa29.11■■■□□ 2.25
CMTR1-205ENST00000475364 GGT6Q6P531 493 aa29.1■■■□□ 2.25
CMTR1-205ENST00000475364 MYO3AQ8NEV4 1616 aa29.09■■■□□ 2.25
CMTR1-205ENST00000475364 APLP2Q06481 763 aa29.08■■■□□ 2.25
CMTR1-205ENST00000475364 FAM135AQ9P2D6 1515 aa29.08■■■□□ 2.25
CMTR1-205ENST00000475364 ZNF142P52746 1687 aaPredicted RBP29.08■■■□□ 2.25
CMTR1-205ENST00000475364 CROCC2H7BZ55 1655 aa29.06■■■□□ 2.24
CMTR1-205ENST00000475364 PPP6R1Q9UPN7 881 aa29.05■■■□□ 2.24
CMTR1-205ENST00000475364 PTPN23Q9H3S7 1636 aa29.05■■■□□ 2.24
CMTR1-205ENST00000475364 KDM5DQ9BY66 1539 aa29.04■■■□□ 2.24
CMTR1-205ENST00000475364 TSPY4P0CV99 314 aa29.04■■■□□ 2.24
CMTR1-205ENST00000475364 TSPY10P0CW01 314 aa29.04■■■□□ 2.24
CMTR1-205ENST00000475364 PTPRKQ15262 1439 aa29.03■■■□□ 2.24
CMTR1-205ENST00000475364 EIF2AK4Q9P2K8 1649 aaKnown RBP29.02■■■□□ 2.24
CMTR1-205ENST00000475364 RNF17Q9BXT8 1623 aaKnown RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms