RNA–Protein interactions for RNA: ENST00000474966.1

RAB3GAP2-205, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 2

Gene RAB3GAP2, Length 848 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-205ENST00000474966 TMEM92Q6UXU6 159 aa14.71□□□□□ -0.05
RAB3GAP2-205ENST00000474966 LARP6Q9BRS8 491 aaKnown RBP14.7□□□□□ -0.06
RAB3GAP2-205ENST00000474966 CRISPLD2Q9H0B8 497 aa14.7□□□□□ -0.06
RAB3GAP2-205ENST00000474966 PDE4AP27815 886 aa14.68□□□□□ -0.06
RAB3GAP2-205ENST00000474966 TMC2Q8TDI7 906 aa14.68□□□□□ -0.06
RAB3GAP2-205ENST00000474966 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.68□□□□□ -0.06
RAB3GAP2-205ENST00000474966 C2orf72A6NCS6 295 aa14.66□□□□□ -0.06
RAB3GAP2-205ENST00000474966 GPHNQ9NQX3 736 aaPredicted RBP14.65□□□□□ -0.06
RAB3GAP2-205ENST00000474966 WDR70Q9NW82 654 aa14.64□□□□□ -0.07
RAB3GAP2-205ENST00000474966 LHX8Q68G74 356 aa14.63□□□□□ -0.07
RAB3GAP2-205ENST00000474966 DDX27Q96GQ7 796 aaKnown RBP14.62□□□□□ -0.07
RAB3GAP2-205ENST00000474966 SCUBE2Q9NQ36 999 aa14.62□□□□□ -0.07
RAB3GAP2-205ENST00000474966 KIF3CO14782 793 aa14.61□□□□□ -0.07
RAB3GAP2-205ENST00000474966 DSG2Q14126 1118 aa14.6□□□□□ -0.07
RAB3GAP2-205ENST00000474966 MFSD10Q14728 455 aa14.6□□□□□ -0.07
RAB3GAP2-205ENST00000474966 MAMSTRQ6ZN01 415 aa14.6□□□□□ -0.07
RAB3GAP2-205ENST00000474966 PPP1R15BQ5SWA1 713 aa14.58□□□□□ -0.08
RAB3GAP2-205ENST00000474966 SLAIN1Q8ND83 568 aa14.57□□□□□ -0.08
RAB3GAP2-205ENST00000474966 FOXK1P85037 733 aa14.55□□□□□ -0.08
RAB3GAP2-205ENST00000474966 OTUD5Q96G74 571 aa14.55□□□□□ -0.08
RAB3GAP2-205ENST00000474966 PLPP6Q8IY26 295 aa14.54□□□□□ -0.08
RAB3GAP2-205ENST00000474966 E2F4Q16254 413 aa14.49□□□□□ -0.09
RAB3GAP2-205ENST00000474966 KCNV2Q8TDN2 545 aa14.47□□□□□ -0.09
RAB3GAP2-205ENST00000474966 CAMK2BQ13554 666 aa14.42□□□□□ -0.1
RAB3GAP2-205ENST00000474966 EMILIN3Q9NT22 766 aa14.42□□□□□ -0.1
RAB3GAP2-205ENST00000474966 P3H3Q8IVL6 736 aa14.41□□□□□ -0.1
RAB3GAP2-205ENST00000474966 UPF1Q92900 1129 aaKnown RBP eCLIP14.4□□□□□ -0.1
RAB3GAP2-205ENST00000474966 DPYSL4O14531 572 aa14.35□□□□□ -0.11
RAB3GAP2-205ENST00000474966 HOXB3P14651 431 aaPredicted RBP14.35□□□□□ -0.11
RAB3GAP2-205ENST00000474966 ARHGEF1Q92888 912 aaKnown RBP14.33□□□□□ -0.12
RAB3GAP2-205ENST00000474966 OXER1Q8TDS5 423 aa14.32□□□□□ -0.12
RAB3GAP2-205ENST00000474966 DOK7Q18PE1 504 aa14.31□□□□□ -0.12
RAB3GAP2-205ENST00000474966 SLC34A2O95436 690 aa14.29□□□□□ -0.12
RAB3GAP2-205ENST00000474966 MAP3K9P80192 1104 aa14.29□□□□□ -0.12
RAB3GAP2-205ENST00000474966 PTCD2Q8WV60 388 aaKnown RBP14.28□□□□□ -0.12
RAB3GAP2-205ENST00000474966 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.13
RAB3GAP2-205ENST00000474966 PCDHGA4Q9Y5G9 962 aa14.27□□□□□ -0.13
RAB3GAP2-205ENST00000474966 SNPHO15079 494 aa14.26□□□□□ -0.13
RAB3GAP2-205ENST00000474966 NBR1Q14596 966 aa14.26□□□□□ -0.13
RAB3GAP2-205ENST00000474966 ARIH1Q9Y4X5 557 aaPredicted RBP14.26□□□□□ -0.13
RAB3GAP2-205ENST00000474966 KHSRPQ92945 711 aaKnown RBP eCLIP14.24□□□□□ -0.13
RAB3GAP2-205ENST00000474966 RIMBP2O15034 1052 aa14.23□□□□□ -0.13
RAB3GAP2-205ENST00000474966 ARSIQ5FYB1 569 aa14.23□□□□□ -0.13
RAB3GAP2-205ENST00000474966 BCANQ96GW7 911 aa14.23□□□□□ -0.13
RAB3GAP2-205ENST00000474966 TBC1D12O60347 775 aa14.22□□□□□ -0.13
RAB3GAP2-205ENST00000474966 SEMA3EO15041 775 aa14.2□□□□□ -0.14
RAB3GAP2-205ENST00000474966 EVI5O60447 810 aa14.19□□□□□ -0.14
RAB3GAP2-205ENST00000474966 PDIA6Q15084 440 aa14.19□□□□□ -0.14
RAB3GAP2-205ENST00000474966 GPR153Q6NV75 609 aa14.18□□□□□ -0.14
RAB3GAP2-205ENST00000474966 NUDT7P0C024 238 aa14.17□□□□□ -0.14
RAB3GAP2-205ENST00000474966 ZSWIM6Q9HCJ5 1215 aa14.17□□□□□ -0.14
RAB3GAP2-205ENST00000474966 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
RAB3GAP2-205ENST00000474966 FAM163AQ96GL9 167 aaPredicted RBP14.15□□□□□ -0.14
RAB3GAP2-205ENST00000474966 ZNF316A6NFI3 1004 aaPredicted RBP14.13□□□□□ -0.15
RAB3GAP2-205ENST00000474966 ST18O60284 1047 aa14.12□□□□□ -0.15
RAB3GAP2-205ENST00000474966 MLLT3P42568 568 aaPredicted RBP14.12□□□□□ -0.15
RAB3GAP2-205ENST00000474966 KDM4FA0A1W2PPD8 638 aa14.11□□□□□ -0.15
RAB3GAP2-205ENST00000474966 HOXB1P14653 301 aaPredicted RBP14.11□□□□□ -0.15
RAB3GAP2-205ENST00000474966 DDX12PQ92771 950 aa14.1□□□□□ -0.15
RAB3GAP2-205ENST00000474966 TESPA1A2RU30 521 aaPredicted RBP14.09□□□□□ -0.15
RAB3GAP2-205ENST00000474966 GRXCR2A6NFK2 248 aa14.08□□□□□ -0.16
RAB3GAP2-205ENST00000474966 ANO8Q9HCE9 1232 aaPredicted RBP14.08□□□□□ -0.16
RAB3GAP2-205ENST00000474966 MARVELD3Q96A59 401 aa14.05□□□□□ -0.16
RAB3GAP2-205ENST00000474966 LHX6Q9UPM6 363 aa14.04□□□□□ -0.16
RAB3GAP2-205ENST00000474966 LCE2DQ5TA82 110 aaPredicted RBP14.03□□□□□ -0.16
RAB3GAP2-205ENST00000474966 PTGER2P43116 358 aa14.02□□□□□ -0.17
RAB3GAP2-205ENST00000474966 EMP3P54852 163 aa13.99□□□□□ -0.17
RAB3GAP2-205ENST00000474966 ZNF454Q8N9F8 522 aa13.99□□□□□ -0.17
RAB3GAP2-205ENST00000474966 PCDHGA10Q9Y5H3 936 aa13.98□□□□□ -0.17
RAB3GAP2-205ENST00000474966 SMYD5Q6GMV2 418 aa13.97□□□□□ -0.17
RAB3GAP2-205ENST00000474966 JPH4Q96JJ6 628 aa13.97□□□□□ -0.17
RAB3GAP2-205ENST00000474966 TULP1O00294 542 aaPredicted RBP13.96□□□□□ -0.17
RAB3GAP2-205ENST00000474966 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
RAB3GAP2-205ENST00000474966 FOSBP53539 338 aa13.96□□□□□ -0.17
RAB3GAP2-205ENST00000474966 ERBB3P21860 1342 aa13.95□□□□□ -0.18
RAB3GAP2-205ENST00000474966 PHF14O94880 888 aa13.95□□□□□ -0.18
RAB3GAP2-205ENST00000474966 OSBPP22059 807 aa13.95□□□□□ -0.18
RAB3GAP2-205ENST00000474966 RBM26Q5T8P6 1007 aaKnown RBP13.95□□□□□ -0.18
RAB3GAP2-205ENST00000474966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.94□□□□□ -0.18
RAB3GAP2-205ENST00000474966 RBM33Q96EV2 1170 aaKnown RBP13.94□□□□□ -0.18
RAB3GAP2-205ENST00000474966 FAM205CA6NFA0 338 aa13.93□□□□□ -0.18
RAB3GAP2-205ENST00000474966 VARS2Q5ST30 1063 aaKnown RBP13.93□□□□□ -0.18
RAB3GAP2-205ENST00000474966 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
RAB3GAP2-205ENST00000474966 TYW1BQ6NUM6 668 aa13.91□□□□□ -0.18
RAB3GAP2-205ENST00000474966 EPAS1Q99814 870 aa13.91□□□□□ -0.18
RAB3GAP2-205ENST00000474966 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
RAB3GAP2-205ENST00000474966 ZDHHC16Q969W1 377 aa13.9□□□□□ -0.18
RAB3GAP2-205ENST00000474966 MAP3K7O43318 606 aa13.88□□□□□ -0.19
RAB3GAP2-205ENST00000474966 ADAM33Q9BZ11 813 aa13.88□□□□□ -0.19
RAB3GAP2-205ENST00000474966 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
RAB3GAP2-205ENST00000474966 EN1Q05925 392 aaPredicted RBP13.87□□□□□ -0.19
RAB3GAP2-205ENST00000474966 POTEB3A0JP26 581 aa13.86□□□□□ -0.19
RAB3GAP2-205ENST00000474966 POTEBQ6S5H4 581 aa13.86□□□□□ -0.19
RAB3GAP2-205ENST00000474966 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
RAB3GAP2-205ENST00000474966 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
RAB3GAP2-205ENST00000474966 TSR1Q2NL82 804 aaKnown RBP13.85□□□□□ -0.19
RAB3GAP2-205ENST00000474966 HS3ST6Q96QI5 342 aa13.85□□□□□ -0.19
RAB3GAP2-205ENST00000474966 CDHR5Q9HBB8 845 aa13.84□□□□□ -0.19
RAB3GAP2-205ENST00000474966 GPIHBP1Q8IV16 184 aa13.81□□□□□ -0.2
RAB3GAP2-205ENST00000474966 C6orf132Q5T0Z8 1188 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms