RNA–Protein interactions for RNA: ENST00000474311.1

NEPRO-215, Transcript of nucleolus and neural progenitor protein, human

TSL 2

Gene NEPRO, Length 1,671 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-215	ENST00000474311	RETREG2	Q8NC44	543 aa		11.55	□□□□□ -0.56
NEPRO-215	ENST00000474311	AKT1S1	Q96B36	256 aa		11.55	□□□□□ -0.56
NEPRO-215	ENST00000474311	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.55	□□□□□ -0.56
NEPRO-215	ENST00000474311	IRF5	Q13568	498 aa		11.54	□□□□□ -0.56
NEPRO-215	ENST00000474311	RBM26	Q5T8P6	1007 aa	Known RBP	11.52	□□□□□ -0.56
NEPRO-215	ENST00000474311	GPIHBP1	Q8IV16	184 aa		11.52	□□□□□ -0.56
NEPRO-215	ENST00000474311	CHRM1	P11229	460 aa	Predicted RBP	11.51	□□□□□ -0.57
NEPRO-215	ENST00000474311	SERPINA10	Q9UK55	444 aa		11.5	□□□□□ -0.57
NEPRO-215	ENST00000474311	CCDC97	Q96F63	343 aa	Predicted RBP	11.49	□□□□□ -0.57
NEPRO-215	ENST00000474311	OSCAR	Q8IYS5	282 aa		11.48	□□□□□ -0.57
NEPRO-215	ENST00000474311	FBXW7	Q969H0	707 aa		11.48	□□□□□ -0.57
NEPRO-215	ENST00000474311	DDRGK1	Q96HY6	314 aa		11.48	□□□□□ -0.57
NEPRO-215	ENST00000474311	USP35	Q9P2H5	1018 aa		11.48	□□□□□ -0.57
NEPRO-215	ENST00000474311	SPDYE2B	A6NHP3	402 aa		11.46	□□□□□ -0.58
NEPRO-215	ENST00000474311	SPDYE6	P0CI01	402 aa		11.46	□□□□□ -0.58
NEPRO-215	ENST00000474311	SPDYE2	Q495Y8	402 aa		11.46	□□□□□ -0.58
NEPRO-215	ENST00000474311	PROSER2	Q86WR7	435 aa	Predicted RBP	11.44	□□□□□ -0.58
NEPRO-215	ENST00000474311	FAM212A	Q96EL1	285 aa		11.43	□□□□□ -0.58
NEPRO-215	ENST00000474311	MCM6	Q14566	821 aa		11.43	□□□□□ -0.58
NEPRO-215	ENST00000474311	REM2	Q8IYK8	340 aa	Predicted RBP	11.42	□□□□□ -0.58
NEPRO-215	ENST00000474311	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.41	□□□□□ -0.58
NEPRO-215	ENST00000474311	MLLT3	P42568	568 aa	Predicted RBP	11.39	□□□□□ -0.59
NEPRO-215	ENST00000474311	GOPC	Q9HD26	462 aa		11.38	□□□□□ -0.59
NEPRO-215	ENST00000474311	MFRP	Q9BY79	579 aa		11.36	□□□□□ -0.59
NEPRO-215	ENST00000474311	PPP1R37	O75864	691 aa		11.36	□□□□□ -0.59
NEPRO-215	ENST00000474311	POM121	Q96HA1	1249 aa		11.36	□□□□□ -0.59
NEPRO-215	ENST00000474311	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.36	□□□□□ -0.59
NEPRO-215	ENST00000474311	FAM177A1	Q8N128	213 aa	Predicted RBP	11.35	□□□□□ -0.59
NEPRO-215	ENST00000474311	PYGB	P11216	843 aa		11.34	□□□□□ -0.59
NEPRO-215	ENST00000474311	RSPH4A	Q5TD94	716 aa		11.34	□□□□□ -0.59
NEPRO-215	ENST00000474311	PLSCR2	Q9NRY7	297 aa		11.33	□□□□□ -0.6
NEPRO-215	ENST00000474311	PARP9	Q8IXQ6	854 aa		11.32	□□□□□ -0.6
NEPRO-215	ENST00000474311	AMOTL2	Q9Y2J4	779 aa		11.31	□□□□□ -0.6
NEPRO-215	ENST00000474311	NCKAP5L	Q9HCH0	1330 aa		11.31	□□□□□ -0.6
NEPRO-215	ENST00000474311	PITPNM1	O00562	1244 aa		11.28	□□□□□ -0.6
NEPRO-215	ENST00000474311	PIP4P2	Q8N4L2	257 aa		11.28	□□□□□ -0.6
NEPRO-215	ENST00000474311	RASEF	Q8IZ41	740 aa		11.27	□□□□□ -0.6
NEPRO-215	ENST00000474311	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.27	□□□□□ -0.6
NEPRO-215	ENST00000474311	LARP6	Q9BRS8	491 aa	Known RBP	11.27	□□□□□ -0.6
NEPRO-215	ENST00000474311	AMHR2	Q16671	573 aa		11.27	□□□□□ -0.61
NEPRO-215	ENST00000474311	GPR37	O15354	613 aa		11.26	□□□□□ -0.61
NEPRO-215	ENST00000474311	PATL2	C9JE40	543 aa	Known RBP	11.24	□□□□□ -0.61
NEPRO-215	ENST00000474311	CCDC102A	Q96A19	550 aa		11.24	□□□□□ -0.61
NEPRO-215	ENST00000474311	FXR2	P51116	673 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
NEPRO-215	ENST00000474311	MFSD10	Q14728	455 aa		11.23	□□□□□ -0.61
NEPRO-215	ENST00000474311	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.22	□□□□□ -0.61
NEPRO-215	ENST00000474311	PPP1R15A	O75807	674 aa	Predicted RBP	11.22	□□□□□ -0.61
NEPRO-215	ENST00000474311	DHX37	Q8IY37	1157 aa	Known RBP	11.21	□□□□□ -0.61
NEPRO-215	ENST00000474311	KCNA1	Q09470	495 aa		11.2	□□□□□ -0.62
NEPRO-215	ENST00000474311	CAMK2B	Q13554	666 aa		11.2	□□□□□ -0.62
NEPRO-215	ENST00000474311	UNCX	A6NJT0	531 aa		11.19	□□□□□ -0.62
NEPRO-215	ENST00000474311	CCDC27	Q2M243	656 aa		11.19	□□□□□ -0.62
NEPRO-215	ENST00000474311	PDE4C	Q08493	712 aa		11.18	□□□□□ -0.62
NEPRO-215	ENST00000474311	ACIN1	Q9UKV3	1341 aa	Known RBP	11.18	□□□□□ -0.62
NEPRO-215	ENST00000474311	MNX1	P50219	401 aa	Predicted RBP	11.17	□□□□□ -0.62
NEPRO-215	ENST00000474311	SP7	Q8TDD2	431 aa	Predicted RBP	11.17	□□□□□ -0.62
NEPRO-215	ENST00000474311	BRD1	O95696	1058 aa		11.17	□□□□□ -0.62
NEPRO-215	ENST00000474311	PDE4A	P27815	886 aa		11.17	□□□□□ -0.62
NEPRO-215	ENST00000474311	MAP2K5	Q13163	448 aa		11.17	□□□□□ -0.62
NEPRO-215	ENST00000474311	POLR3GL	Q9BT43	218 aa		11.17	□□□□□ -0.62
NEPRO-215	ENST00000474311	IGSF5	Q9NSI5	407 aa		11.17	□□□□□ -0.62
NEPRO-215	ENST00000474311	COG6	Q9Y2V7	657 aa		11.17	□□□□□ -0.62
NEPRO-215	ENST00000474311	IRF6	O14896	467 aa		11.16	□□□□□ -0.62
NEPRO-215	ENST00000474311	DDX27	Q96GQ7	796 aa	Known RBP	11.16	□□□□□ -0.62
NEPRO-215	ENST00000474311	CCDC125	Q86Z20	511 aa		11.15	□□□□□ -0.62
NEPRO-215	ENST00000474311	MYT1L	Q9UL68	1186 aa		11.15	□□□□□ -0.62
NEPRO-215	ENST00000474311	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.15	□□□□□ -0.62
NEPRO-215	ENST00000474311	FBXO22	Q8NEZ5	403 aa		11.14	□□□□□ -0.63
NEPRO-215	ENST00000474311	MS4A1	P11836	297 aa		11.13	□□□□□ -0.63
NEPRO-215	ENST00000474311	PDAP1	Q13442	181 aa	Known RBP	11.13	□□□□□ -0.63
NEPRO-215	ENST00000474311	PPM1G	O15355	546 aa	Predicted RBP	11.12	□□□□□ -0.63
NEPRO-215	ENST00000474311	TTLL12	Q14166	644 aa	Predicted RBP	11.12	□□□□□ -0.63
NEPRO-215	ENST00000474311	CRISPLD2	Q9H0B8	497 aa		11.12	□□□□□ -0.63
NEPRO-215	ENST00000474311	BRD2	P25440	801 aa	Known RBP	11.11	□□□□□ -0.63
NEPRO-215	ENST00000474311	SH3D19	Q5HYK7	790 aa		11.11	□□□□□ -0.63
NEPRO-215	ENST00000474311	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.1	□□□□□ -0.63
NEPRO-215	ENST00000474311	HAX1	O00165	279 aa		11.09	□□□□□ -0.63
NEPRO-215	ENST00000474311	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.09	□□□□□ -0.63
NEPRO-215	ENST00000474311	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
NEPRO-215	ENST00000474311	OXER1	Q8TDS5	423 aa		11.08	□□□□□ -0.64
NEPRO-215	ENST00000474311	IVNS1ABP	Q9Y6Y0	642 aa		11.08	□□□□□ -0.64
NEPRO-215	ENST00000474311	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.08	□□□□□ -0.64
NEPRO-215	ENST00000474311	CREBZF	Q9NS37	354 aa		11.06	□□□□□ -0.64
NEPRO-215	ENST00000474311	SPDYE5	A6NIY4	337 aa		11.05	□□□□□ -0.64
NEPRO-215	ENST00000474311	NLRP6	P59044	892 aa		11.05	□□□□□ -0.64
NEPRO-215	ENST00000474311	PHF8	Q9UPP1	1060 aa		11.04	□□□□□ -0.64
NEPRO-215	ENST00000474311	CARNS1	A5YM72	827 aa		11.04	□□□□□ -0.64
NEPRO-215	ENST00000474311	CALR3	Q96L12	384 aa	Known RBP	11.04	□□□□□ -0.64
NEPRO-215	ENST00000474311	REPIN1	Q9BWE0	567 aa	Known RBP	11.03	□□□□□ -0.64
NEPRO-215	ENST00000474311	CLEC11A	Q9Y240	323 aa		11.03	□□□□□ -0.64
NEPRO-215	ENST00000474311	UST	Q9Y2C2	406 aa		11.03	□□□□□ -0.64
NEPRO-215	ENST00000474311	PCDHB8	Q9UN66	801 aa		11.02	□□□□□ -0.64
NEPRO-215	ENST00000474311	PCDHB13	Q9Y5F0	798 aa		11.02	□□□□□ -0.64
NEPRO-215	ENST00000474311	CWC22	Q9HCG8	908 aa	Known RBP	11.01	□□□□□ -0.65
NEPRO-215	ENST00000474311	FECH	P22830	423 aa		11.01	□□□□□ -0.65
NEPRO-215	ENST00000474311	SKIV2L	Q15477	1246 aa	Known RBP	11.01	□□□□□ -0.65
NEPRO-215	ENST00000474311	EFCAB3	Q8N7B9	438 aa		11.01	□□□□□ -0.65
NEPRO-215	ENST00000474311	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.01	□□□□□ -0.65
NEPRO-215	ENST00000474311	RBM47	A0AV96	593 aa	Known RBP	11	□□□□□ -0.65
NEPRO-215	ENST00000474311	PSEN1	P49768	467 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms