RNA–Protein interactions for RNA: ENST00000474153.1

UBE3C-206, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-206ENST00000474153 ITSN2Q9NZM3 1697 aa9.77□□□□□ -0.85
UBE3C-206ENST00000474153 ARHGEF40Q8TER5 1519 aa9.77□□□□□ -0.85
UBE3C-206ENST00000474153 TROQ12816 1431 aaPredicted RBP9.76□□□□□ -0.85
UBE3C-206ENST00000474153 PLEKHD1A6NEE1 506 aa9.76□□□□□ -0.85
UBE3C-206ENST00000474153 RIMS1Q86UR5 1692 aaKnown RBP9.76□□□□□ -0.85
UBE3C-206ENST00000474153 ZMYM4Q5VZL5 1548 aa9.76□□□□□ -0.85
UBE3C-206ENST00000474153 FANCAO15360 1455 aa9.75□□□□□ -0.85
UBE3C-206ENST00000474153 AKNAQ7Z591 1439 aa9.74□□□□□ -0.85
UBE3C-206ENST00000474153 CERKQ8TCT0 537 aa9.74□□□□□ -0.85
UBE3C-206ENST00000474153 MAGI2Q86UL8 1455 aa9.73□□□□□ -0.85
UBE3C-206ENST00000474153 EHBP1L1Q8N3D4 1523 aa9.73□□□□□ -0.85
UBE3C-206ENST00000474153 TIAM1Q13009 1591 aa9.73□□□□□ -0.85
UBE3C-206ENST00000474153 HSPA2P54652 639 aa9.73□□□□□ -0.85
UBE3C-206ENST00000474153 SUPT6HQ7KZ85 1726 aaKnown RBP9.73□□□□□ -0.85
UBE3C-206ENST00000474153 SIGLEC1Q9BZZ2 1709 aa9.73□□□□□ -0.85
UBE3C-206ENST00000474153 MAP3K1Q13233 1512 aa9.72□□□□□ -0.85
UBE3C-206ENST00000474153 KDM5CP41229 1560 aa9.72□□□□□ -0.85
UBE3C-206ENST00000474153 RANGAP1P46060 587 aaPredicted RBP9.72□□□□□ -0.85
UBE3C-206ENST00000474153 PLCH2O75038 1416 aa9.72□□□□□ -0.85
UBE3C-206ENST00000474153 ZFYVE16Q7Z3T8 1539 aa9.72□□□□□ -0.85
UBE3C-206ENST00000474153 EHMT2Q96KQ7 1210 aa9.71□□□□□ -0.86
UBE3C-206ENST00000474153 ABCC1P33527 1531 aa9.71□□□□□ -0.86
UBE3C-206ENST00000474153 VPS8Q8N3P4 1428 aa9.7□□□□□ -0.86
UBE3C-206ENST00000474153 FER1L4A9Z1Z3 1794 aa9.69□□□□□ -0.86
UBE3C-206ENST00000474153 SAMD9LQ8IVG5 1584 aa9.69□□□□□ -0.86
UBE3C-206ENST00000474153 DMRT2Q9Y5R5 561 aa9.69□□□□□ -0.86
UBE3C-206ENST00000474153 KIDINS220Q9ULH0 1771 aa9.68□□□□□ -0.86
UBE3C-206ENST00000474153 PLPPR3Q6T4P5 718 aa9.68□□□□□ -0.86
UBE3C-206ENST00000474153 REREQ9P2R6 1566 aa9.67□□□□□ -0.86
UBE3C-206ENST00000474153 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
UBE3C-206ENST00000474153 PREX1Q8TCU6 1659 aa9.67□□□□□ -0.86
UBE3C-206ENST00000474153 SETD1BQ9UPS6 1966 aaKnown RBP9.66□□□□□ -0.86
UBE3C-206ENST00000474153 ATP10AO60312 1499 aa9.66□□□□□ -0.86
UBE3C-206ENST00000474153 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
UBE3C-206ENST00000474153 MLECQ14165 292 aa9.66□□□□□ -0.86
UBE3C-206ENST00000474153 CDK11AQ9UQ88 783 aaPredicted RBP9.66□□□□□ -0.86
UBE3C-206ENST00000474153 ARHGAP5Q13017 1502 aa9.66□□□□□ -0.86
UBE3C-206ENST00000474153 ABCA6Q8N139 1617 aa9.65□□□□□ -0.86
UBE3C-206ENST00000474153 INO80Q9ULG1 1556 aaPredicted RBP9.65□□□□□ -0.86
UBE3C-206ENST00000474153 ARHGEF12Q9NZN5 1544 aa9.65□□□□□ -0.86
UBE3C-206ENST00000474153 GPATCH8Q9UKJ3 1502 aaKnown RBP9.65□□□□□ -0.86
UBE3C-206ENST00000474153 C9orf84Q5VXU9 1444 aa9.65□□□□□ -0.87
UBE3C-206ENST00000474153 EFCAB2Q5VUJ9 269 aa9.64□□□□□ -0.87
UBE3C-206ENST00000474153 ZNF518AQ6AHZ1 1483 aa9.64□□□□□ -0.87
UBE3C-206ENST00000474153 ADGBQ8N7X0 1667 aa9.64□□□□□ -0.87
UBE3C-206ENST00000474153 DISP3Q9P2K9 1392 aa9.63□□□□□ -0.87
UBE3C-206ENST00000474153 DIP2CQ9Y2E4 1556 aa9.63□□□□□ -0.87
UBE3C-206ENST00000474153 LOC105371045A0A1W2PR82 267 aa9.63□□□□□ -0.87
UBE3C-206ENST00000474153 SOCS7O14512 581 aa9.63□□□□□ -0.87
UBE3C-206ENST00000474153 CROCC2H7BZ55 1655 aa9.63□□□□□ -0.87
UBE3C-206ENST00000474153 LRRC9Q6ZRR7 1453 aa9.62□□□□□ -0.87
UBE3C-206ENST00000474153 STRCQ7RTU9 1775 aa9.61□□□□□ -0.87
UBE3C-206ENST00000474153 UHRF1BP1Q6BDS2 1440 aa9.61□□□□□ -0.87
UBE3C-206ENST00000474153 SYCP2Q9BX26 1530 aa9.61□□□□□ -0.87
UBE3C-206ENST00000474153 MLH3Q9UHC1 1453 aa9.6□□□□□ -0.87
UBE3C-206ENST00000474153 PLXNC1O60486 1568 aa9.6□□□□□ -0.87
UBE3C-206ENST00000474153 ARHGEF5Q12774 1597 aa9.6□□□□□ -0.87
UBE3C-206ENST00000474153 CEBPAP49715 358 aaPredicted RBP9.6□□□□□ -0.87
UBE3C-206ENST00000474153 NCOA2Q15596 1464 aa9.59□□□□□ -0.87
UBE3C-206ENST00000474153 PTPRTO14522 1441 aa9.59□□□□□ -0.87
UBE3C-206ENST00000474153 ILDR2Q71H61 639 aa9.59□□□□□ -0.87
UBE3C-206ENST00000474153 KIAA1107Q9UPP5 1409 aa9.58□□□□□ -0.88
UBE3C-206ENST00000474153 MTUS2Q5JR59 1369 aa9.58□□□□□ -0.88
UBE3C-206ENST00000474153 PLEKHH2Q8IVE3 1493 aa9.58□□□□□ -0.88
UBE3C-206ENST00000474153 MAST1Q9Y2H9 1570 aa9.58□□□□□ -0.88
UBE3C-206ENST00000474153 MROH2AA6NES4 1674 aa9.58□□□□□ -0.88
UBE3C-206ENST00000474153 AGLP35573 1532 aa9.57□□□□□ -0.88
UBE3C-206ENST00000474153 ESF1Q9H501 851 aaKnown RBP9.57□□□□□ -0.88
UBE3C-206ENST00000474153 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
UBE3C-206ENST00000474153 IQSEC2Q5JU85 1478 aa9.57□□□□□ -0.88
UBE3C-206ENST00000474153 ATP7AQ04656 1500 aa9.56□□□□□ -0.88
UBE3C-206ENST00000474153 MBD5Q9P267 1494 aa9.56□□□□□ -0.88
UBE3C-206ENST00000474153 AFAP1Q8N556 730 aa9.56□□□□□ -0.88
UBE3C-206ENST00000474153 MYT1LQ9UL68 1186 aa9.56□□□□□ -0.88
UBE3C-206ENST00000474153 TRAPPC8Q9Y2L5 1435 aa9.56□□□□□ -0.88
UBE3C-206ENST00000474153 C3P01024 1663 aa9.55□□□□□ -0.88
UBE3C-206ENST00000474153 SPATA31D1Q6ZQQ2 1576 aa9.54□□□□□ -0.88
UBE3C-206ENST00000474153 CAMSAP2Q08AD1 1489 aa9.54□□□□□ -0.88
UBE3C-206ENST00000474153 PTPN23Q9H3S7 1636 aa9.54□□□□□ -0.88
UBE3C-206ENST00000474153 CNTLNQ9NXG0 1405 aa9.54□□□□□ -0.88
UBE3C-206ENST00000474153 DNMT1P26358 1616 aaKnown RBP9.53□□□□□ -0.88
UBE3C-206ENST00000474153 LTBP4Q8N2S1 1624 aa9.53□□□□□ -0.88
UBE3C-206ENST00000474153 CCNB3Q8WWL7 1395 aa9.53□□□□□ -0.88
UBE3C-206ENST00000474153 MIA2Q96PC5 1412 aa9.53□□□□□ -0.88
UBE3C-206ENST00000474153 EIF2AK4Q9P2K8 1649 aaKnown RBP9.53□□□□□ -0.88
UBE3C-206ENST00000474153 MYOM3Q5VTT5 1437 aa9.52□□□□□ -0.89
UBE3C-206ENST00000474153 RTEL1-TNFRSF6BF6WH68 1400 aa9.51□□□□□ -0.89
UBE3C-206ENST00000474153 NCOA1Q15788 1441 aa9.51□□□□□ -0.89
UBE3C-206ENST00000474153 TCOF1Q13428 1488 aaKnown RBP9.51□□□□□ -0.89
UBE3C-206ENST00000474153 CCDC141Q6ZP82 1450 aa9.51□□□□□ -0.89
UBE3C-206ENST00000474153 NPATQ14207 1427 aa9.5□□□□□ -0.89
UBE3C-206ENST00000474153 RNF17Q9BXT8 1623 aaKnown RBP9.5□□□□□ -0.89
UBE3C-206ENST00000474153 ZC3H13Q5T200 1668 aaKnown RBP9.49□□□□□ -0.89
UBE3C-206ENST00000474153 FAM135AQ9P2D6 1515 aa9.49□□□□□ -0.89
UBE3C-206ENST00000474153 DEPDC5O75140 1603 aa9.49□□□□□ -0.89
UBE3C-206ENST00000474153 CLTCQ00610 1675 aaKnown RBP9.48□□□□□ -0.89
UBE3C-206ENST00000474153 SHANK2Q9UPX8 1470 aa9.48□□□□□ -0.89
UBE3C-206ENST00000474153 KANK4Q5T7N3 995 aaPredicted RBP9.48□□□□□ -0.89
UBE3C-206ENST00000474153 CAMSAP1Q5T5Y3 1602 aa9.47□□□□□ -0.89
UBE3C-206ENST00000474153 CFDP1Q9UEE9 299 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms