RNA–Protein interactions for RNA: ENST00000472958.5

EXD3-204, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 4

Gene EXD3, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-204ENST00000472958 ZFYVE16Q7Z3T8 1539 aa31.28■■■□□ 2.6
EXD3-204ENST00000472958 MAGI2Q86UL8 1455 aa31.27■■■□□ 2.6
EXD3-204ENST00000472958 FYCO1Q9BQS8 1478 aa31.27■■■□□ 2.6
EXD3-204ENST00000472958 SCAPERQ9BY12 1400 aa31.26■■■□□ 2.6
EXD3-204ENST00000472958 EFCAB2Q5VUJ9 269 aa31.23■■■□□ 2.59
EXD3-204ENST00000472958 MADDQ8WXG6 1647 aa31.22■■■□□ 2.59
EXD3-204ENST00000472958 PTPRMP28827 1452 aa31.21■■■□□ 2.59
EXD3-204ENST00000472958 ARHGAP5Q13017 1502 aa31.21■■■□□ 2.59
EXD3-204ENST00000472958 YEATS2Q9ULM3 1422 aa31.2■■■□□ 2.59
EXD3-204ENST00000472958 ARID4BQ4LE39 1312 aaPredicted RBP31.2■■■□□ 2.58
EXD3-204ENST00000472958 PREX2Q70Z35 1606 aa31.17■■■□□ 2.58
EXD3-204ENST00000472958 CDC42BPBQ9Y5S2 1711 aa31.16■■■□□ 2.58
EXD3-204ENST00000472958 SIGLEC1Q9BZZ2 1709 aa31.15■■■□□ 2.58
EXD3-204ENST00000472958 ZNF518AQ6AHZ1 1483 aa31.14■■■□□ 2.57
EXD3-204ENST00000472958 KDM5CP41229 1560 aa31.12■■■□□ 2.57
EXD3-204ENST00000472958 RIMS1Q86UR5 1692 aaKnown RBP31.1■■■□□ 2.57
EXD3-204ENST00000472958 CDC42BPAQ5VT25 1732 aa31.07■■■□□ 2.56
EXD3-204ENST00000472958 ABCC1P33527 1531 aa31.06■■■□□ 2.56
EXD3-204ENST00000472958 ATP10AO60312 1499 aa31.06■■■□□ 2.56
EXD3-204ENST00000472958 C9orf84Q5VXU9 1444 aa31.05■■■□□ 2.56
EXD3-204ENST00000472958 ITSN2Q9NZM3 1697 aa31.03■■■□□ 2.56
EXD3-204ENST00000472958 FER1L4A9Z1Z3 1794 aa31■■■□□ 2.55
EXD3-204ENST00000472958 DIP2CQ9Y2E4 1556 aa30.98■■■□□ 2.55
EXD3-204ENST00000472958 AFAP1Q8N556 730 aa30.97■■■□□ 2.55
EXD3-204ENST00000472958 ARHGEF12Q9NZN5 1544 aa30.97■■■□□ 2.55
EXD3-204ENST00000472958 REREQ9P2R6 1566 aa30.96■■■□□ 2.55
EXD3-204ENST00000472958 MLH3Q9UHC1 1453 aa30.96■■■□□ 2.55
EXD3-204ENST00000472958 CEP162Q5TB80 1403 aa30.96■■■□□ 2.55
EXD3-204ENST00000472958 ABCA6Q8N139 1617 aa30.94■■■□□ 2.54
EXD3-204ENST00000472958 TRAPPC8Q9Y2L5 1435 aa30.93■■■□□ 2.54
EXD3-204ENST00000472958 GPATCH8Q9UKJ3 1502 aaKnown RBP30.93■■■□□ 2.54
EXD3-204ENST00000472958 SAMD9LQ8IVG5 1584 aa30.92■■■□□ 2.54
EXD3-204ENST00000472958 LMTK3Q96Q04 1460 aa30.91■■■□□ 2.54
EXD3-204ENST00000472958 MLECQ14165 292 aa30.89■■■□□ 2.54
EXD3-204ENST00000472958 MTUS2Q5JR59 1369 aa30.87■■■□□ 2.53
EXD3-204ENST00000472958 EHBP1L1Q8N3D4 1523 aa30.87■■■□□ 2.53
EXD3-204ENST00000472958 KIDINS220Q9ULH0 1771 aa30.86■■■□□ 2.53
EXD3-204ENST00000472958 SYCP2Q9BX26 1530 aa30.85■■■□□ 2.53
EXD3-204ENST00000472958 MYT1LQ9UL68 1186 aa30.85■■■□□ 2.53
EXD3-204ENST00000472958 AGLP35573 1532 aa30.83■■■□□ 2.53
EXD3-204ENST00000472958 PLEKHH2Q8IVE3 1493 aa30.82■■■□□ 2.52
EXD3-204ENST00000472958 CCNB3Q8WWL7 1395 aa30.81■■■□□ 2.52
EXD3-204ENST00000472958 ZNF777Q9ULD5 760 aaPredicted RBP30.79■■■□□ 2.52
EXD3-204ENST00000472958 KIAA1107Q9UPP5 1409 aa30.79■■■□□ 2.52
EXD3-204ENST00000472958 TIAM1Q13009 1591 aa30.79■■■□□ 2.52
EXD3-204ENST00000472958 CFDP1Q9UEE9 299 aaPredicted RBP30.76■■■□□ 2.51
EXD3-204ENST00000472958 PLPPR3Q6T4P5 718 aa30.74■■■□□ 2.51
EXD3-204ENST00000472958 INO80Q9ULG1 1556 aaPredicted RBP30.73■■■□□ 2.51
EXD3-204ENST00000472958 PREX1Q8TCU6 1659 aa30.71■■■□□ 2.51
EXD3-204ENST00000472958 ATP7AQ04656 1500 aa30.71■■■□□ 2.51
EXD3-204ENST00000472958 SPAG9O60271 1321 aaKnown RBP30.7■■■□□ 2.5
EXD3-204ENST00000472958 HNRNPMP52272 730 aaKnown RBP eCLIP30.69■■■□□ 2.5
EXD3-204ENST00000472958 ILDR1Q86SU0 546 aaPredicted RBP30.69■■■□□ 2.5
EXD3-204ENST00000472958 SUPT6HQ7KZ85 1726 aaKnown RBP30.67■■■□□ 2.5
EXD3-204ENST00000472958 VPS8Q8N3P4 1428 aa30.65■■■□□ 2.5
EXD3-204ENST00000472958 C3P01024 1663 aa30.65■■■□□ 2.5
EXD3-204ENST00000472958 PLXNC1O60486 1568 aa30.64■■■□□ 2.5
EXD3-204ENST00000472958 HSPA2P54652 639 aa30.63■■■□□ 2.49
EXD3-204ENST00000472958 NCOA2Q15596 1464 aa30.63■■■□□ 2.49
EXD3-204ENST00000472958 CEBPAP49715 358 aaPredicted RBP30.62■■■□□ 2.49
EXD3-204ENST00000472958 LOC105371045A0A1W2PR82 267 aa30.61■■■□□ 2.49
EXD3-204ENST00000472958 CNTLNQ9NXG0 1405 aa30.61■■■□□ 2.49
EXD3-204ENST00000472958 MBD5Q9P267 1494 aa30.6■■■□□ 2.49
EXD3-204ENST00000472958 SETD1BQ9UPS6 1966 aaKnown RBP30.59■■■□□ 2.49
EXD3-204ENST00000472958 ADGBQ8N7X0 1667 aa30.58■■■□□ 2.49
EXD3-204ENST00000472958 A2MP01023 1474 aa30.57■■■□□ 2.48
EXD3-204ENST00000472958 ZNF644Q9H582 1327 aaPredicted RBP30.57■■■□□ 2.48
EXD3-204ENST00000472958 MROH2AA6NES4 1674 aa30.57■■■□□ 2.48
EXD3-204ENST00000472958 ESF1Q9H501 851 aaKnown RBP30.56■■■□□ 2.48
EXD3-204ENST00000472958 UHRF1BP1Q6BDS2 1440 aa30.55■■■□□ 2.48
EXD3-204ENST00000472958 CAMSAP2Q08AD1 1489 aa30.52■■■□□ 2.48
EXD3-204ENST00000472958 LRRC9Q6ZRR7 1453 aa30.52■■■□□ 2.48
EXD3-204ENST00000472958 MAP3K1Q13233 1512 aa30.52■■■□□ 2.48
EXD3-204ENST00000472958 RTEL1-TNFRSF6BF6WH68 1400 aa30.51■■■□□ 2.47
EXD3-204ENST00000472958 CCDC141Q6ZP82 1450 aa30.5■■■□□ 2.47
EXD3-204ENST00000472958 CLTCQ00610 1675 aaKnown RBP30.45■■■□□ 2.46
EXD3-204ENST00000472958 ARHGEF5Q12774 1597 aa30.45■■■□□ 2.46
EXD3-204ENST00000472958 NPATQ14207 1427 aa30.43■■■□□ 2.46
EXD3-204ENST00000472958 STRCQ7RTU9 1775 aa30.42■■■□□ 2.46
EXD3-204ENST00000472958 RSPH4AQ5TD94 716 aa30.4■■■□□ 2.46
EXD3-204ENST00000472958 FBXO41Q8TF61 875 aa30.4■■■□□ 2.46
EXD3-204ENST00000472958 ZMYM3Q14202 1370 aa30.39■■■□□ 2.45
EXD3-204ENST00000472958 DHX29Q7Z478 1369 aaKnown RBP30.38■■■□□ 2.45
EXD3-204ENST00000472958 PPP6R1Q9UPN7 881 aa30.35■■■□□ 2.45
EXD3-204ENST00000472958 GGT6Q6P531 493 aa30.34■■■□□ 2.45
EXD3-204ENST00000472958 KANK4Q5T7N3 995 aaPredicted RBP30.33■■■□□ 2.45
EXD3-204ENST00000472958 FAM135AQ9P2D6 1515 aa30.32■■■□□ 2.44
EXD3-204ENST00000472958 MYOM3Q5VTT5 1437 aa30.31■■■□□ 2.44
EXD3-204ENST00000472958 DMRT2Q9Y5R5 561 aa30.31■■■□□ 2.44
EXD3-204ENST00000472958 MIA2Q96PC5 1412 aa30.3■■■□□ 2.44
EXD3-204ENST00000472958 MYO3AQ8NEV4 1616 aa30.3■■■□□ 2.44
EXD3-204ENST00000472958 MAST1Q9Y2H9 1570 aa30.3■■■□□ 2.44
EXD3-204ENST00000472958 PTPRKQ15262 1439 aa30.3■■■□□ 2.44
EXD3-204ENST00000472958 ZNF142P52746 1687 aaPredicted RBP30.3■■■□□ 2.44
EXD3-204ENST00000472958 PTPRTO14522 1441 aa30.26■■■□□ 2.43
EXD3-204ENST00000472958 NCOA1Q15788 1441 aa30.26■■■□□ 2.43
EXD3-204ENST00000472958 TSPY4P0CV99 314 aa30.25■■■□□ 2.43
EXD3-204ENST00000472958 TSPY10P0CW01 314 aa30.25■■■□□ 2.43
EXD3-204ENST00000472958 KDM5DQ9BY66 1539 aa30.24■■■□□ 2.43
EXD3-204ENST00000472958 CEP170BQ9Y4F5 1589 aaPredicted RBP30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms