RNA–Protein interactions for RNA: ENST00000472921.1

CCDC13-204, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 314 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-204ENST00000472921 PTPN23Q9H3S7 1636 aa18.3■□□□□ 0.52
CCDC13-204ENST00000472921 CD109Q6YHK3 1445 aa18.29■□□□□ 0.52
CCDC13-204ENST00000472921 FAM50AQ14320 339 aaKnown RBP18.27■□□□□ 0.52
CCDC13-204ENST00000472921 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.52
CCDC13-204ENST00000472921 DIP2BQ9P265 1576 aa18.26■□□□□ 0.51
CCDC13-204ENST00000472921 KIAA1107Q9UPP5 1409 aa18.26■□□□□ 0.51
CCDC13-204ENST00000472921 FAM69CQ0P6D2 419 aa18.26■□□□□ 0.51
CCDC13-204ENST00000472921 MYO5CQ9NQX4 1742 aa18.26■□□□□ 0.51
CCDC13-204ENST00000472921 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
CCDC13-204ENST00000472921 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
CCDC13-204ENST00000472921 PLEKHH2Q8IVE3 1493 aa18.25■□□□□ 0.51
CCDC13-204ENST00000472921 ARHGAP5Q13017 1502 aa18.24■□□□□ 0.51
CCDC13-204ENST00000472921 CAMSAP2Q08AD1 1489 aa18.24■□□□□ 0.51
CCDC13-204ENST00000472921 MAP3K4Q9Y6R4 1608 aa18.23■□□□□ 0.51
CCDC13-204ENST00000472921 ZNF777Q9ULD5 760 aaPredicted RBP18.22■□□□□ 0.51
CCDC13-204ENST00000472921 MBD5Q9P267 1494 aa18.21■□□□□ 0.51
CCDC13-204ENST00000472921 FANCAO15360 1455 aa18.2■□□□□ 0.5
CCDC13-204ENST00000472921 SAMD9LQ8IVG5 1584 aa18.2■□□□□ 0.5
CCDC13-204ENST00000472921 ABCC5O15440 1437 aa18.19■□□□□ 0.5
CCDC13-204ENST00000472921 NEO1Q92859 1461 aa18.19■□□□□ 0.5
CCDC13-204ENST00000472921 ARHGEF5Q12774 1597 aa18.18■□□□□ 0.5
CCDC13-204ENST00000472921 DAPK1P53355 1430 aa18.18■□□□□ 0.5
CCDC13-204ENST00000472921 AKNAQ7Z591 1439 aa18.18■□□□□ 0.5
CCDC13-204ENST00000472921 PTPRKQ15262 1439 aa18.17■□□□□ 0.5
CCDC13-204ENST00000472921 HNRNPMP52272 730 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCDC13-204ENST00000472921 CFAP74Q9C0B2 1584 aa18.16■□□□□ 0.5
CCDC13-204ENST00000472921 DNMT1P26358 1616 aaKnown RBP18.16■□□□□ 0.5
CCDC13-204ENST00000472921 ABCC1P33527 1531 aa18.15■□□□□ 0.5
CCDC13-204ENST00000472921 ARHGEF12Q9NZN5 1544 aa18.14■□□□□ 0.49
CCDC13-204ENST00000472921 ROCK1Q13464 1354 aa18.14■□□□□ 0.49
CCDC13-204ENST00000472921 TEX14Q8IWB6 1497 aa18.14■□□□□ 0.49
CCDC13-204ENST00000472921 TSPY4P0CV99 314 aa18.13■□□□□ 0.49
CCDC13-204ENST00000472921 TSPY10P0CW01 314 aa18.13■□□□□ 0.49
CCDC13-204ENST00000472921 ITGAEP38570 1179 aa18.13■□□□□ 0.49
CCDC13-204ENST00000472921 CCDC141Q6ZP82 1450 aa18.13■□□□□ 0.49
CCDC13-204ENST00000472921 SHANK2Q9UPX8 1470 aa18.13■□□□□ 0.49
CCDC13-204ENST00000472921 SCAPERQ9BY12 1400 aa18.12■□□□□ 0.49
CCDC13-204ENST00000472921 ADGRL1O94910 1474 aa18.12■□□□□ 0.49
CCDC13-204ENST00000472921 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
CCDC13-204ENST00000472921 SYCP2Q9BX26 1530 aa18.11■□□□□ 0.49
CCDC13-204ENST00000472921 ADGRL2O95490 1459 aa18.1■□□□□ 0.49
CCDC13-204ENST00000472921 HRCP23327 699 aa18.1■□□□□ 0.49
CCDC13-204ENST00000472921 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.49
CCDC13-204ENST00000472921 PPRC1Q5VV67 1664 aaKnown RBP18.08■□□□□ 0.48
CCDC13-204ENST00000472921 MAST1Q9Y2H9 1570 aa18.08■□□□□ 0.48
CCDC13-204ENST00000472921 HFM1A2PYH4 1435 aa18.07■□□□□ 0.48
CCDC13-204ENST00000472921 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
CCDC13-204ENST00000472921 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
CCDC13-204ENST00000472921 AFAP1Q8N556 730 aa18.06■□□□□ 0.48
CCDC13-204ENST00000472921 C9orf84Q5VXU9 1444 aa18.06■□□□□ 0.48
CCDC13-204ENST00000472921 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
CCDC13-204ENST00000472921 CHIC2Q9UKJ5 165 aa18.05■□□□□ 0.48
CCDC13-204ENST00000472921 DENND4BO75064 1496 aaPredicted RBP18.05■□□□□ 0.48
CCDC13-204ENST00000472921 ZNF518AQ6AHZ1 1483 aa18.05■□□□□ 0.48
CCDC13-204ENST00000472921 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
CCDC13-204ENST00000472921 SETD5Q9C0A6 1442 aa18.05■□□□□ 0.48
CCDC13-204ENST00000472921 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
CCDC13-204ENST00000472921 NAIPQ13075 1403 aa18.04■□□□□ 0.48
CCDC13-204ENST00000472921 POGZQ7Z3K3 1410 aa18.04■□□□□ 0.48
CCDC13-204ENST00000472921 ACIN1Q9UKV3 1341 aaKnown RBP18.03■□□□□ 0.48
CCDC13-204ENST00000472921 SPAG9O60271 1321 aaKnown RBP18.02■□□□□ 0.48
CCDC13-204ENST00000472921 MLH3Q9UHC1 1453 aa18.01■□□□□ 0.47
CCDC13-204ENST00000472921 KDM5CP41229 1560 aa18■□□□□ 0.47
CCDC13-204ENST00000472921 RRP7BPQ9NSQ0 103 aa17.99■□□□□ 0.47
CCDC13-204ENST00000472921 ADGBQ8N7X0 1667 aa17.97■□□□□ 0.47
CCDC13-204ENST00000472921 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
CCDC13-204ENST00000472921 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
CCDC13-204ENST00000472921 PLXNC1O60486 1568 aa17.96■□□□□ 0.47
CCDC13-204ENST00000472921 KIF15Q9NS87 1388 aa17.95■□□□□ 0.46
CCDC13-204ENST00000472921 ZFYVE16Q7Z3T8 1539 aa17.95■□□□□ 0.46
CCDC13-204ENST00000472921 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
CCDC13-204ENST00000472921 TSPOAP1O95153 1857 aa17.95■□□□□ 0.46
CCDC13-204ENST00000472921 MAGI2Q86UL8 1455 aa17.95■□□□□ 0.46
CCDC13-204ENST00000472921 COL17A1Q9UMD9 1497 aaPredicted RBP17.94■□□□□ 0.46
CCDC13-204ENST00000472921 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
CCDC13-204ENST00000472921 ATP7AQ04656 1500 aa17.93■□□□□ 0.46
CCDC13-204ENST00000472921 RICTORQ6R327 1708 aa17.93■□□□□ 0.46
CCDC13-204ENST00000472921 ZMYM4Q5VZL5 1548 aa17.93■□□□□ 0.46
CCDC13-204ENST00000472921 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
CCDC13-204ENST00000472921 DUOX2Q9NRD8 1548 aa17.92■□□□□ 0.46
CCDC13-204ENST00000472921 FRMPD1Q5SYB0 1578 aa17.91■□□□□ 0.46
CCDC13-204ENST00000472921 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
CCDC13-204ENST00000472921 HECW2Q9P2P5 1572 aa17.9■□□□□ 0.46
CCDC13-204ENST00000472921 ERBINQ96RT1 1412 aa17.89■□□□□ 0.46
CCDC13-204ENST00000472921 KIDINS220Q9ULH0 1771 aa17.89■□□□□ 0.45
CCDC13-204ENST00000472921 MYT1LQ9UL68 1186 aa17.86■□□□□ 0.45
CCDC13-204ENST00000472921 KDM6BO15054 1643 aa17.85■□□□□ 0.45
CCDC13-204ENST00000472921 A2MP01023 1474 aa17.84■□□□□ 0.45
CCDC13-204ENST00000472921 YEATS2Q9ULM3 1422 aa17.82■□□□□ 0.44
CCDC13-204ENST00000472921 ATP10AO60312 1499 aa17.82■□□□□ 0.44
CCDC13-204ENST00000472921 DHX57Q6P158 1386 aaKnown RBP17.81■□□□□ 0.44
CCDC13-204ENST00000472921 REREQ9P2R6 1566 aa17.81■□□□□ 0.44
CCDC13-204ENST00000472921 DIP2CQ9Y2E4 1556 aa17.81■□□□□ 0.44
CCDC13-204ENST00000472921 ABCA6Q8N139 1617 aa17.8■□□□□ 0.44
CCDC13-204ENST00000472921 EIF2AK4Q9P2K8 1649 aaKnown RBP17.8■□□□□ 0.44
CCDC13-204ENST00000472921 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
CCDC13-204ENST00000472921 KDM5DQ9BY66 1539 aa17.78■□□□□ 0.44
CCDC13-204ENST00000472921 TRIM52Q96A61 297 aa17.78■□□□□ 0.44
CCDC13-204ENST00000472921 BCORL1Q5H9F3 1711 aa17.76■□□□□ 0.43
CCDC13-204ENST00000472921 KIF3BO15066 747 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms