RNA–Protein interactions for RNA: ENST00000472734.1

RCOR3-205, Transcript of REST corepressor 3, human

TSL 2

Gene RCOR3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RCOR3-205	ENST00000472734	ITSN2	Q9NZM3	1697 aa		32.72	■■■□□ 2.83
RCOR3-205	ENST00000472734	CDC42BPB	Q9Y5S2	1711 aa		32.71	■■■□□ 2.83
RCOR3-205	ENST00000472734	FGD6	Q6ZV73	1430 aa		32.7	■■■□□ 2.83
RCOR3-205	ENST00000472734	ARHGAP5	Q13017	1502 aa		32.69	■■■□□ 2.82
RCOR3-205	ENST00000472734	FANCA	O15360	1455 aa		32.67	■■■□□ 2.82
RCOR3-205	ENST00000472734	PPRC1	Q5VV67	1664 aa	Known RBP	32.65	■■■□□ 2.82
RCOR3-205	ENST00000472734	TEX14	Q8IWB6	1497 aa		32.64	■■■□□ 2.82
RCOR3-205	ENST00000472734	RRBP1	Q9P2E9	1410 aa	Known RBP	32.64	■■■□□ 2.82
RCOR3-205	ENST00000472734	NEO1	Q92859	1461 aa		32.63	■■■□□ 2.81
RCOR3-205	ENST00000472734	ZNF644	Q9H582	1327 aa	Predicted RBP	32.63	■■■□□ 2.81
RCOR3-205	ENST00000472734	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.63	■■■□□ 2.81
RCOR3-205	ENST00000472734	TCOF1	Q13428	1488 aa	Known RBP	32.61	■■■□□ 2.81
RCOR3-205	ENST00000472734	AKNA	Q7Z591	1439 aa		32.6	■■■□□ 2.81
RCOR3-205	ENST00000472734	TSPOAP1	O95153	1857 aa		32.58	■■■□□ 2.81
RCOR3-205	ENST00000472734	PTPN23	Q9H3S7	1636 aa		32.58	■■■□□ 2.81
RCOR3-205	ENST00000472734	CFAP74	Q9C0B2	1584 aa		32.58	■■■□□ 2.81
RCOR3-205	ENST00000472734	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.58	■■■□□ 2.81	1e-7	■■□□□ 12.7
RCOR3-205	ENST00000472734	SAMD9L	Q8IVG5	1584 aa		32.57	■■■□□ 2.8
RCOR3-205	ENST00000472734	KIAA1107	Q9UPP5	1409 aa		32.56	■■■□□ 2.8
RCOR3-205	ENST00000472734	CAMSAP2	Q08AD1	1489 aa		32.55	■■■□□ 2.8
RCOR3-205	ENST00000472734	PLEKHH2	Q8IVE3	1493 aa		32.54	■■■□□ 2.8
RCOR3-205	ENST00000472734	FAM50A	Q14320	339 aa	Known RBP	32.52	■■■□□ 2.8
RCOR3-205	ENST00000472734	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.5	■■■□□ 2.79
RCOR3-205	ENST00000472734	SCAPER	Q9BY12	1400 aa		32.5	■■■□□ 2.79
RCOR3-205	ENST00000472734	ADGRL1	O94910	1474 aa		32.49	■■■□□ 2.79
RCOR3-205	ENST00000472734	MBD5	Q9P267	1494 aa		32.49	■■■□□ 2.79
RCOR3-205	ENST00000472734	ABCC1	P33527	1531 aa		32.49	■■■□□ 2.79
RCOR3-205	ENST00000472734	ARHGEF12	Q9NZN5	1544 aa		32.49	■■■□□ 2.79
RCOR3-205	ENST00000472734	RSPH4A	Q5TD94	716 aa		32.48	■■■□□ 2.79
RCOR3-205	ENST00000472734	SYCP2	Q9BX26	1530 aa		32.43	■■■□□ 2.78
RCOR3-205	ENST00000472734	TRAPPC8	Q9Y2L5	1435 aa		32.41	■■■□□ 2.78
RCOR3-205	ENST00000472734	DENND4B	O75064	1496 aa	Predicted RBP	32.41	■■■□□ 2.78
RCOR3-205	ENST00000472734	ARHGEF5	Q12774	1597 aa		32.41	■■■□□ 2.78
RCOR3-205	ENST00000472734	TRIM26	Q12899	539 aa	Predicted RBP	32.39	■■■□□ 2.78
RCOR3-205	ENST00000472734	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.39	■■■□□ 2.78
RCOR3-205	ENST00000472734	ABCC5	O15440	1437 aa		32.38	■■■□□ 2.77
RCOR3-205	ENST00000472734	AFAP1	Q8N556	730 aa		32.38	■■■□□ 2.77
RCOR3-205	ENST00000472734	POGZ	Q7Z3K3	1410 aa		32.36	■■■□□ 2.77
RCOR3-205	ENST00000472734	RAPGEF3	O95398	923 aa		32.36	■■■□□ 2.77
RCOR3-205	ENST00000472734	DAPK1	P53355	1430 aa		32.35	■■■□□ 2.77
RCOR3-205	ENST00000472734	CCDC141	Q6ZP82	1450 aa		32.35	■■■□□ 2.77
RCOR3-205	ENST00000472734	DNMT1	P26358	1616 aa	Known RBP	32.33	■■■□□ 2.77
RCOR3-205	ENST00000472734	ZNF518A	Q6AHZ1	1483 aa		32.33	■■■□□ 2.77
RCOR3-205	ENST00000472734	TSPY4	P0CV99	314 aa		32.31	■■■□□ 2.76
RCOR3-205	ENST00000472734	TSPY10	P0CW01	314 aa		32.31	■■■□□ 2.76
RCOR3-205	ENST00000472734	PTPRK	Q15262	1439 aa		32.29	■■■□□ 2.76
RCOR3-205	ENST00000472734	ITGAE	P38570	1179 aa		32.27	■■■□□ 2.76
RCOR3-205	ENST00000472734	RICTOR	Q6R327	1708 aa		32.26	■■■□□ 2.76
RCOR3-205	ENST00000472734	KDM5C	P41229	1560 aa		32.26	■■■□□ 2.75
RCOR3-205	ENST00000472734	FRMPD1	Q5SYB0	1578 aa		32.26	■■■□□ 2.75
RCOR3-205	ENST00000472734	SPAG9	O60271	1321 aa	Known RBP	32.26	■■■□□ 2.75
RCOR3-205	ENST00000472734	SHANK2	Q9UPX8	1470 aa		32.25	■■■□□ 2.75
RCOR3-205	ENST00000472734	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.24	■■■□□ 2.75
RCOR3-205	ENST00000472734	KDM6B	O15054	1643 aa		32.22	■■■□□ 2.75
RCOR3-205	ENST00000472734	C9orf84	Q5VXU9	1444 aa		32.22	■■■□□ 2.75
RCOR3-205	ENST00000472734	MLH3	Q9UHC1	1453 aa		32.22	■■■□□ 2.75
RCOR3-205	ENST00000472734	MAST1	Q9Y2H9	1570 aa		32.21	■■■□□ 2.75
RCOR3-205	ENST00000472734	CHIC2	Q9UKJ5	165 aa		32.2	■■■□□ 2.75
RCOR3-205	ENST00000472734	CROCC2	H7BZ55	1655 aa		32.2	■■■□□ 2.74
RCOR3-205	ENST00000472734	ZMYM4	Q5VZL5	1548 aa		32.2	■■■□□ 2.74
RCOR3-205	ENST00000472734	ROCK1	Q13464	1354 aa		32.17	■■■□□ 2.74
RCOR3-205	ENST00000472734	MAGI2	Q86UL8	1455 aa		32.16	■■■□□ 2.74
RCOR3-205	ENST00000472734	ADGRL2	O95490	1459 aa		32.16	■■■□□ 2.74
RCOR3-205	ENST00000472734	NCOA1	Q15788	1441 aa		32.14	■■■□□ 2.74
RCOR3-205	ENST00000472734	INO80	Q9ULG1	1556 aa	Predicted RBP	32.14	■■■□□ 2.74
RCOR3-205	ENST00000472734	ZFYVE16	Q7Z3T8	1539 aa		32.13	■■■□□ 2.73
RCOR3-205	ENST00000472734	ANKRD30A	Q9BXX3	1397 aa		32.13	■■■□□ 2.73
RCOR3-205	ENST00000472734	HECW2	Q9P2P5	1572 aa		32.12	■■■□□ 2.73
RCOR3-205	ENST00000472734	ATP7A	Q04656	1500 aa		32.12	■■■□□ 2.73
RCOR3-205	ENST00000472734	MYT1L	Q9UL68	1186 aa		32.11	■■■□□ 2.73
RCOR3-205	ENST00000472734	KIDINS220	Q9ULH0	1771 aa		32.1	■■■□□ 2.73
RCOR3-205	ENST00000472734	RRP7BP	Q9NSQ0	103 aa		32.07	■■■□□ 2.72
RCOR3-205	ENST00000472734	YEATS2	Q9ULM3	1422 aa		32.07	■■■□□ 2.72
RCOR3-205	ENST00000472734	PLXNC1	O60486	1568 aa		32.06	■■■□□ 2.72
RCOR3-205	ENST00000472734	ADGB	Q8N7X0	1667 aa		32.05	■■■□□ 2.72
RCOR3-205	ENST00000472734	PCGF6	Q9BYE7	350 aa		32.03	■■■□□ 2.72
RCOR3-205	ENST00000472734	KIF15	Q9NS87	1388 aa		32.03	■■■□□ 2.72
RCOR3-205	ENST00000472734	HFM1	A2PYH4	1435 aa		32	■■■□□ 2.71
RCOR3-205	ENST00000472734	NAIP	Q13075	1403 aa		32	■■■□□ 2.71
RCOR3-205	ENST00000472734	DIP2C	Q9Y2E4	1556 aa		31.99	■■■□□ 2.71
RCOR3-205	ENST00000472734	ATP10A	O60312	1499 aa		31.99	■■■□□ 2.71
RCOR3-205	ENST00000472734	DHX29	Q7Z478	1369 aa	Known RBP	31.99	■■■□□ 2.71
RCOR3-205	ENST00000472734	ABCA6	Q8N139	1617 aa		31.99	■■■□□ 2.71
RCOR3-205	ENST00000472734	DUOX2	Q9NRD8	1548 aa		31.96	■■■□□ 2.71
RCOR3-205	ENST00000472734	ARHGEF40	Q8TER5	1519 aa		31.95	■■■□□ 2.71
RCOR3-205	ENST00000472734	A2M	P01023	1474 aa		31.95	■■■□□ 2.7
RCOR3-205	ENST00000472734	SETD5	Q9C0A6	1442 aa		31.92	■■■□□ 2.7
RCOR3-205	ENST00000472734	ANKRD50	Q9ULJ7	1429 aa		31.91	■■■□□ 2.7
RCOR3-205	ENST00000472734	RERE	Q9P2R6	1566 aa		31.9	■■■□□ 2.7
RCOR3-205	ENST00000472734	ERBIN	Q96RT1	1412 aa		31.89	■■■□□ 2.7
RCOR3-205	ENST00000472734	GCC2	Q8IWJ2	1684 aa		31.86	■■■□□ 2.69
RCOR3-205	ENST00000472734	HRC	P23327	699 aa		31.85	■■■□□ 2.69
RCOR3-205	ENST00000472734	AGL	P35573	1532 aa		31.82	■■■□□ 2.68
RCOR3-205	ENST00000472734	RAB3GAP2	Q9H2M9	1393 aa		31.8	■■■□□ 2.68
RCOR3-205	ENST00000472734	KIF3B	O15066	747 aa		31.79	■■■□□ 2.68
RCOR3-205	ENST00000472734	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.78	■■■□□ 2.68
RCOR3-205	ENST00000472734	ACIN1	Q9UKV3	1341 aa	Known RBP	31.76	■■■□□ 2.68
RCOR3-205	ENST00000472734	BCORL1	Q5H9F3	1711 aa		31.75	■■■□□ 2.67
RCOR3-205	ENST00000472734	SIGLEC1	Q9BZZ2	1709 aa		31.75	■■■□□ 2.67
RCOR3-205	ENST00000472734	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.69	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms