RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CCDC82Q8N4S0 544 aa4.75□□□□□ -1.65
XRN1-210ENST00000472697 MAMSTRQ6ZN01 415 aa4.75□□□□□ -1.65
XRN1-210ENST00000472697 EFCAB3Q8N7B9 438 aa4.74□□□□□ -1.65
XRN1-210ENST00000472697 LARP6Q9BRS8 491 aaKnown RBP4.74□□□□□ -1.65
XRN1-210ENST00000472697 POTEIP0CG38 1075 aa4.74□□□□□ -1.65
XRN1-210ENST00000472697 FBXO22Q8NEZ5 403 aa4.74□□□□□ -1.65
XRN1-210ENST00000472697 TRIM66O15016 1216 aa4.73□□□□□ -1.65
XRN1-210ENST00000472697 PDE4DQ08499 809 aa4.73□□□□□ -1.65
XRN1-210ENST00000472697 ZNF579Q8NAF0 562 aaKnown RBP4.73□□□□□ -1.65
XRN1-210ENST00000472697 OTUD5Q96G74 571 aa4.73□□□□□ -1.65
XRN1-210ENST00000472697 FECHP22830 423 aa4.73□□□□□ -1.65
XRN1-210ENST00000472697 CHRM1P11229 460 aaPredicted RBP4.72□□□□□ -1.65
XRN1-210ENST00000472697 SGIP1Q9BQI5 828 aa4.72□□□□□ -1.65
XRN1-210ENST00000472697 MS4A4AQ96JQ5 239 aa4.72□□□□□ -1.65
XRN1-210ENST00000472697 ZNF316A6NFI3 1004 aaPredicted RBP4.7□□□□□ -1.66
XRN1-210ENST00000472697 ONECUT3O60422 494 aaPredicted RBP4.7□□□□□ -1.66
XRN1-210ENST00000472697 KRI1Q8N9T8 703 aaKnown RBP4.7□□□□□ -1.66
XRN1-210ENST00000472697 POM121Q96HA1 1249 aa4.7□□□□□ -1.66
XRN1-210ENST00000472697 GPR37O15354 613 aa4.7□□□□□ -1.66
XRN1-210ENST00000472697 CABP2Q9NPB3 220 aa4.7□□□□□ -1.66
XRN1-210ENST00000472697 IGSF3O75054 1194 aa4.69□□□□□ -1.66
XRN1-210ENST00000472697 IFNL1Q8IU54 200 aa4.69□□□□□ -1.66
XRN1-210ENST00000472697 GPIHBP1Q8IV16 184 aa4.69□□□□□ -1.66
XRN1-210ENST00000472697 AK7Q96M32 723 aa4.69□□□□□ -1.66
XRN1-210ENST00000472697 REPIN1Q9BWE0 567 aaKnown RBP4.69□□□□□ -1.66
XRN1-210ENST00000472697 ZRANB1Q9UGI0 708 aa4.68□□□□□ -1.66
XRN1-210ENST00000472697 ZNF777Q9ULD5 760 aaPredicted RBP4.68□□□□□ -1.66
XRN1-210ENST00000472697 PSEN1P49768 467 aa4.68□□□□□ -1.66
XRN1-210ENST00000472697 EMILIN3Q9NT22 766 aa4.68□□□□□ -1.66
XRN1-210ENST00000472697 CARNS1A5YM72 827 aa4.67□□□□□ -1.66
XRN1-210ENST00000472697 DPYSL4O14531 572 aa4.67□□□□□ -1.66
XRN1-210ENST00000472697 FOXD4L5Q5VV16 416 aaPredicted RBP4.67□□□□□ -1.66
XRN1-210ENST00000472697 PARP9Q8IXQ6 854 aa4.67□□□□□ -1.66
XRN1-210ENST00000472697 FOXD4L4Q8WXT5 416 aaPredicted RBP4.67□□□□□ -1.66
XRN1-210ENST00000472697 FBXO31Q5XUX0 539 aaPredicted RBP4.66□□□□□ -1.66
XRN1-210ENST00000472697 DCBLD2Q96PD2 775 aa4.66□□□□□ -1.66
XRN1-210ENST00000472697 CRISPLD2Q9H0B8 497 aa4.66□□□□□ -1.66
XRN1-210ENST00000472697 RYDENQ9NUL5 291 aaKnown RBP4.66□□□□□ -1.66
XRN1-210ENST00000472697 PDAP1Q13442 181 aaKnown RBP4.65□□□□□ -1.66
XRN1-210ENST00000472697 NLRP7Q8WX94 980 aa4.65□□□□□ -1.66
XRN1-210ENST00000472697 AEBP1Q8IUX7 1158 aa4.65□□□□□ -1.67
XRN1-210ENST00000472697 TRPC6Q9Y210 931 aa4.65□□□□□ -1.67
XRN1-210ENST00000472697 PDIA4P13667 645 aaKnown RBP4.64□□□□□ -1.67
XRN1-210ENST00000472697 KCTD17Q8N5Z5 321 aa4.64□□□□□ -1.67
XRN1-210ENST00000472697 CCDC102AQ96A19 550 aa4.64□□□□□ -1.67
XRN1-210ENST00000472697 CCDC61Q9Y6R9 512 aa4.64□□□□□ -1.67
XRN1-210ENST00000472697 MS4A1P11836 297 aa4.64□□□□□ -1.67
XRN1-210ENST00000472697 PRIM1P49642 420 aaKnown RBP4.64□□□□□ -1.67
XRN1-210ENST00000472697 DDX27Q96GQ7 796 aaKnown RBP4.64□□□□□ -1.67
XRN1-210ENST00000472697 MTMR7Q9Y216 660 aa4.64□□□□□ -1.67
XRN1-210ENST00000472697 MAP3K13O43283 966 aa4.63□□□□□ -1.67
XRN1-210ENST00000472697 PAK3O75914 559 aaPredicted RBP4.63□□□□□ -1.67
XRN1-210ENST00000472697 GALR2O43603 387 aaPredicted RBP4.62□□□□□ -1.67
XRN1-210ENST00000472697 IRF5Q13568 498 aa4.62□□□□□ -1.67
XRN1-210ENST00000472697 RAD21O60216 631 aa4.61□□□□□ -1.67
XRN1-210ENST00000472697 TRAK2O60296 914 aa4.61□□□□□ -1.67
XRN1-210ENST00000472697 CAMK2BQ13554 666 aa4.61□□□□□ -1.67
XRN1-210ENST00000472697 MFSD10Q14728 455 aa4.61□□□□□ -1.67
XRN1-210ENST00000472697 CDAN1Q8IWY9 1227 aa4.6□□□□□ -1.67
XRN1-210ENST00000472697 RETREG2Q8NC44 543 aa4.6□□□□□ -1.67
XRN1-210ENST00000472697 PHOX2BQ99453 314 aa4.6□□□□□ -1.67
XRN1-210ENST00000472697 GRXCR2A6NFK2 248 aa4.6□□□□□ -1.67
XRN1-210ENST00000472697 MCM6Q14566 821 aa4.6□□□□□ -1.67
XRN1-210ENST00000472697 FAM161AQ3B820 660 aa4.6□□□□□ -1.67
XRN1-210ENST00000472697 ZNF467Q7Z7K2 595 aaPredicted RBP4.6□□□□□ -1.67
XRN1-210ENST00000472697 PHF12Q96QT6 1004 aa4.6□□□□□ -1.67
XRN1-210ENST00000472697 DPY19L2Q6NUT2 758 aa4.59□□□□□ -1.67
XRN1-210ENST00000472697 PROCA1Q8NCQ7 364 aaPredicted RBP4.59□□□□□ -1.67
XRN1-210ENST00000472697 CCDC9Q9Y3X0 531 aaKnown RBP4.59□□□□□ -1.67
XRN1-210ENST00000472697 ZBTB7CA1YPR0 619 aa4.59□□□□□ -1.67
XRN1-210ENST00000472697 DSG2Q14126 1118 aa4.59□□□□□ -1.67
XRN1-210ENST00000472697 MMRN1Q13201 1228 aa4.58□□□□□ -1.68
XRN1-210ENST00000472697 RGS22Q8NE09 1264 aa4.58□□□□□ -1.68
XRN1-210ENST00000472697 TTLL12Q14166 644 aaPredicted RBP4.58□□□□□ -1.68
XRN1-210ENST00000472697 NUTM2FA1L443 756 aa4.57□□□□□ -1.68
XRN1-210ENST00000472697 IRF6O14896 467 aa4.57□□□□□ -1.68
XRN1-210ENST00000472697 ASTLQ6HA08 431 aaPredicted RBP4.57□□□□□ -1.68
XRN1-210ENST00000472697 FNBP4Q8N3X1 1017 aaPredicted RBP4.57□□□□□ -1.68
XRN1-210ENST00000472697 PELP1Q8IZL8 1130 aaKnown RBP4.57□□□□□ -1.68
XRN1-210ENST00000472697 POTEB2H3BUK9 544 aa4.56□□□□□ -1.68
XRN1-210ENST00000472697 RBM25P49756 843 aaKnown RBP4.56□□□□□ -1.68
XRN1-210ENST00000472697 NLRP6P59044 892 aa4.56□□□□□ -1.68
XRN1-210ENST00000472697 PPP1R15BQ5SWA1 713 aa4.56□□□□□ -1.68
XRN1-210ENST00000472697 GIGYF2Q6Y7W6 1299 aaKnown RBP4.56□□□□□ -1.68
XRN1-210ENST00000472697 DDX12PQ92771 950 aa4.56□□□□□ -1.68
XRN1-210ENST00000472697 PDE4AP27815 886 aa4.56□□□□□ -1.68
XRN1-210ENST00000472697 GZF1Q9H116 711 aaPredicted RBP4.56□□□□□ -1.68
XRN1-210ENST00000472697 POLR3EQ9NVU0 708 aa4.56□□□□□ -1.68
XRN1-210ENST00000472697 ATMINO43313 823 aaPredicted RBP4.55□□□□□ -1.68
XRN1-210ENST00000472697 SMYD5Q6GMV2 418 aa4.55□□□□□ -1.68
XRN1-210ENST00000472697 OXER1Q8TDS5 423 aa4.55□□□□□ -1.68
XRN1-210ENST00000472697 ARIH1Q9Y4X5 557 aaPredicted RBP4.55□□□□□ -1.68
XRN1-210ENST00000472697 SNRKQ9NRH2 765 aa4.55□□□□□ -1.68
XRN1-210ENST00000472697 C7P10643 843 aa4.54□□□□□ -1.68
XRN1-210ENST00000472697 SLC39A7Q92504 469 aa4.54□□□□□ -1.68
XRN1-210ENST00000472697 MS4A3Q96HJ5 214 aa4.54□□□□□ -1.68
XRN1-210ENST00000472697 PDIA6Q15084 440 aa4.54□□□□□ -1.68
XRN1-210ENST00000472697 LCE2DQ5TA82 110 aaPredicted RBP4.54□□□□□ -1.68
XRN1-210ENST00000472697 UPF1Q92900 1129 aaKnown RBP eCLIP4.54□□□□□ -1.68
XRN1-210ENST00000472697 KIF12Q96FN5 646 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms