RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 MAMSTRQ6ZN01 415 aa17.62■□□□□ 0.41
SGCE-210ENST00000472326 OTUD5Q96G74 571 aa17.61■□□□□ 0.41
SGCE-210ENST00000472326 NCKAP5LQ9HCH0 1330 aa17.59■□□□□ 0.41
SGCE-210ENST00000472326 C2orf72A6NCS6 295 aa17.56■□□□□ 0.4
SGCE-210ENST00000472326 SLAIN1Q8ND83 568 aa17.56■□□□□ 0.4
SGCE-210ENST00000472326 TMC2Q8TDI7 906 aa17.55■□□□□ 0.4
SGCE-210ENST00000472326 CRISPLD2Q9H0B8 497 aa17.55■□□□□ 0.4
SGCE-210ENST00000472326 KIF3CO14782 793 aa17.52■□□□□ 0.4
SGCE-210ENST00000472326 PDE4AP27815 886 aa17.52■□□□□ 0.4
SGCE-210ENST00000472326 LARP6Q9BRS8 491 aaKnown RBP17.52■□□□□ 0.4
SGCE-210ENST00000472326 SLC24A1O60721 1099 aa17.51■□□□□ 0.39
SGCE-210ENST00000472326 GPHNQ9NQX3 736 aaPredicted RBP17.51■□□□□ 0.39
SGCE-210ENST00000472326 KDM2AQ9Y2K7 1162 aa17.49■□□□□ 0.39
SGCE-210ENST00000472326 DSG2Q14126 1118 aa17.45■□□□□ 0.38
SGCE-210ENST00000472326 DDX27Q96GQ7 796 aaKnown RBP17.43■□□□□ 0.38
SGCE-210ENST00000472326 VSIG10Q8N0Z9 540 aa17.42■□□□□ 0.38
SGCE-210ENST00000472326 MFSD10Q14728 455 aa17.41■□□□□ 0.38
SGCE-210ENST00000472326 PPP1R15BQ5SWA1 713 aa17.41■□□□□ 0.38
SGCE-210ENST00000472326 FOXK1P85037 733 aa17.4■□□□□ 0.38
SGCE-210ENST00000472326 WDR70Q9NW82 654 aa17.39■□□□□ 0.37
SGCE-210ENST00000472326 PLPP6Q8IY26 295 aa17.38■□□□□ 0.37
SGCE-210ENST00000472326 HOXB3P14651 431 aaPredicted RBP17.25■□□□□ 0.35
SGCE-210ENST00000472326 E2F4Q16254 413 aa17.24■□□□□ 0.35
SGCE-210ENST00000472326 CAMK2BQ13554 666 aa17.21■□□□□ 0.35
SGCE-210ENST00000472326 UPF1Q92900 1129 aaKnown RBP eCLIP17.21■□□□□ 0.35
SGCE-210ENST00000472326 EMILIN3Q9NT22 766 aa17.21■□□□□ 0.35
SGCE-210ENST00000472326 DOK7Q18PE1 504 aa17.19■□□□□ 0.34
SGCE-210ENST00000472326 SNPHO15079 494 aa17.18■□□□□ 0.34
SGCE-210ENST00000472326 KCNV2Q8TDN2 545 aa17.18■□□□□ 0.34
SGCE-210ENST00000472326 SLC34A2O95436 690 aa17.14■□□□□ 0.33
SGCE-210ENST00000472326 ZNF710Q8N1W2 664 aa17.14■□□□□ 0.33
SGCE-210ENST00000472326 OXER1Q8TDS5 423 aa17.13■□□□□ 0.33
SGCE-210ENST00000472326 PTCD2Q8WV60 388 aaKnown RBP17.11■□□□□ 0.33
SGCE-210ENST00000472326 DPYSL4O14531 572 aa17.1■□□□□ 0.33
SGCE-210ENST00000472326 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
SGCE-210ENST00000472326 KHSRPQ92945 711 aaKnown RBP eCLIP17.1■□□□□ 0.33
SGCE-210ENST00000472326 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
SGCE-210ENST00000472326 PCDHGA4Q9Y5G9 962 aa17.1■□□□□ 0.33
SGCE-210ENST00000472326 ARSIQ5FYB1 569 aa17.09■□□□□ 0.33
SGCE-210ENST00000472326 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
SGCE-210ENST00000472326 MAP3K9P80192 1104 aa17.06■□□□□ 0.32
SGCE-210ENST00000472326 GPR153Q6NV75 609 aa17.06■□□□□ 0.32
SGCE-210ENST00000472326 ST18O60284 1047 aa17.05■□□□□ 0.32
SGCE-210ENST00000472326 ZSWIM6Q9HCJ5 1215 aa17.03■□□□□ 0.32
SGCE-210ENST00000472326 TBC1D12O60347 775 aa17.02■□□□□ 0.32
SGCE-210ENST00000472326 NUDT7P0C024 238 aa17.01■□□□□ 0.31
SGCE-210ENST00000472326 ARHGEF1Q92888 912 aaKnown RBP17.01■□□□□ 0.31
SGCE-210ENST00000472326 ARIH1Q9Y4X5 557 aaPredicted RBP17■□□□□ 0.31
SGCE-210ENST00000472326 LCE2DQ5TA82 110 aaPredicted RBP16.99■□□□□ 0.31
SGCE-210ENST00000472326 HOXB1P14653 301 aaPredicted RBP16.98■□□□□ 0.31
SGCE-210ENST00000472326 EVI5O60447 810 aa16.96■□□□□ 0.31
SGCE-210ENST00000472326 MARVELD3Q96A59 401 aa16.95■□□□□ 0.3
SGCE-210ENST00000472326 KDM4FA0A1W2PPD8 638 aa16.92■□□□□ 0.3
SGCE-210ENST00000472326 PDIA6Q15084 440 aa16.92■□□□□ 0.3
SGCE-210ENST00000472326 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
SGCE-210ENST00000472326 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
SGCE-210ENST00000472326 SEMA3EO15041 775 aa16.86■□□□□ 0.29
SGCE-210ENST00000472326 EMP3P54852 163 aa16.86■□□□□ 0.29
SGCE-210ENST00000472326 LHX6Q9UPM6 363 aa16.86■□□□□ 0.29
SGCE-210ENST00000472326 ANO8Q9HCE9 1232 aaPredicted RBP16.85■□□□□ 0.29
SGCE-210ENST00000472326 DDX12PQ92771 950 aa16.82■□□□□ 0.28
SGCE-210ENST00000472326 NBR1Q14596 966 aa16.81■□□□□ 0.28
SGCE-210ENST00000472326 MLLT3P42568 568 aaPredicted RBP16.8■□□□□ 0.28
SGCE-210ENST00000472326 ERBB3P21860 1342 aa16.79■□□□□ 0.28
SGCE-210ENST00000472326 FAM205CA6NFA0 338 aa16.79■□□□□ 0.28
SGCE-210ENST00000472326 GRXCR2A6NFK2 248 aa16.77■□□□□ 0.28
SGCE-210ENST00000472326 VARS2Q5ST30 1063 aaKnown RBP16.76■□□□□ 0.27
SGCE-210ENST00000472326 ZNF454Q8N9F8 522 aa16.75■□□□□ 0.27
SGCE-210ENST00000472326 PTGER2P43116 358 aa16.74■□□□□ 0.27
SGCE-210ENST00000472326 POTEB3A0JP26 581 aa16.73■□□□□ 0.27
SGCE-210ENST00000472326 TESPA1A2RU30 521 aaPredicted RBP16.73■□□□□ 0.27
SGCE-210ENST00000472326 POTEBQ6S5H4 581 aa16.73■□□□□ 0.27
SGCE-210ENST00000472326 FOSBP53539 338 aa16.72■□□□□ 0.27
SGCE-210ENST00000472326 PCDHGA10Q9Y5H3 936 aa16.72■□□□□ 0.27
SGCE-210ENST00000472326 JPH4Q96JJ6 628 aa16.71■□□□□ 0.27
SGCE-210ENST00000472326 HS3ST6Q96QI5 342 aa16.71■□□□□ 0.27
SGCE-210ENST00000472326 PHF14O94880 888 aa16.69■□□□□ 0.26
SGCE-210ENST00000472326 BCANQ96GW7 911 aa16.68■□□□□ 0.26
SGCE-210ENST00000472326 POTEGQ6S5H5 508 aa16.67■□□□□ 0.26
SGCE-210ENST00000472326 PSDA5PKW4 1024 aaPredicted RBP16.65■□□□□ 0.26
SGCE-210ENST00000472326 POTEMA6NI47 508 aa16.65■□□□□ 0.26
SGCE-210ENST00000472326 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
SGCE-210ENST00000472326 PPP4R3BQ5MIZ7 849 aa16.65■□□□□ 0.26
SGCE-210ENST00000472326 OSBPP22059 807 aa16.64■□□□□ 0.25
SGCE-210ENST00000472326 TYW1BQ6NUM6 668 aa16.64■□□□□ 0.25
SGCE-210ENST00000472326 RBM33Q96EV2 1170 aaKnown RBP16.64■□□□□ 0.25
SGCE-210ENST00000472326 ZDHHC16Q969W1 377 aa16.63■□□□□ 0.25
SGCE-210ENST00000472326 EPAS1Q99814 870 aa16.62■□□□□ 0.25
SGCE-210ENST00000472326 ADAM33Q9BZ11 813 aa16.62■□□□□ 0.25
SGCE-210ENST00000472326 SMYD5Q6GMV2 418 aa16.58■□□□□ 0.24
SGCE-210ENST00000472326 FBXW7Q969H0 707 aa16.58■□□□□ 0.24
SGCE-210ENST00000472326 RBM26Q5T8P6 1007 aaKnown RBP16.57■□□□□ 0.24
SGCE-210ENST00000472326 MAP3K7O43318 606 aa16.56■□□□□ 0.24
SGCE-210ENST00000472326 EN1Q05925 392 aaPredicted RBP16.56■□□□□ 0.24
SGCE-210ENST00000472326 ZNF687Q8N1G0 1237 aa16.56■□□□□ 0.24
SGCE-210ENST00000472326 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
SGCE-210ENST00000472326 TSR1Q2NL82 804 aaKnown RBP16.54■□□□□ 0.24
SGCE-210ENST00000472326 POTEEQ6S8J3 1075 aa16.54■□□□□ 0.24
SGCE-210ENST00000472326 BCL2L12Q9HB09 334 aa16.53■□□□□ 0.24
SGCE-210ENST00000472326 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms