RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 NKX1-1Q15270 411 aaPredicted RBP15□□□□□ -0.01
SCAF4-205ENST00000472318 DOK7Q18PE1 504 aa14.99□□□□□ -0.01
SCAF4-205ENST00000472318 MARVELD3Q96A59 401 aa14.98□□□□□ -0.01
SCAF4-205ENST00000472318 KIF3CO14782 793 aa14.96□□□□□ -0.01
SCAF4-205ENST00000472318 EMP3P54852 163 aa14.93□□□□□ -0.02
SCAF4-205ENST00000472318 ZNF710Q8N1W2 664 aa14.93□□□□□ -0.02
SCAF4-205ENST00000472318 C2orf72A6NCS6 295 aa14.91□□□□□ -0.02
SCAF4-205ENST00000472318 RIMBP2O15034 1052 aa14.91□□□□□ -0.02
SCAF4-205ENST00000472318 CDAN1Q8IWY9 1227 aa14.91□□□□□ -0.02
SCAF4-205ENST00000472318 HOXB1P14653 301 aaPredicted RBP14.9□□□□□ -0.02
SCAF4-205ENST00000472318 RYDENQ9NUL5 291 aaKnown RBP14.9□□□□□ -0.02
SCAF4-205ENST00000472318 ZSWIM6Q9HCJ5 1215 aa14.89□□□□□ -0.03
SCAF4-205ENST00000472318 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
SCAF4-205ENST00000472318 AMER1Q5JTC6 1135 aaPredicted RBP14.86□□□□□ -0.03
SCAF4-205ENST00000472318 TMC2Q8TDI7 906 aa14.84□□□□□ -0.03
SCAF4-205ENST00000472318 PLSCR2Q9NRY7 297 aa14.83□□□□□ -0.04
SCAF4-205ENST00000472318 GPR153Q6NV75 609 aa14.82□□□□□ -0.04
SCAF4-205ENST00000472318 HS3ST6Q96QI5 342 aa14.81□□□□□ -0.04
SCAF4-205ENST00000472318 POTEB3A0JP26 581 aa14.8□□□□□ -0.04
SCAF4-205ENST00000472318 FAM205CA6NFA0 338 aa14.8□□□□□ -0.04
SCAF4-205ENST00000472318 POTEBQ6S5H4 581 aa14.8□□□□□ -0.04
SCAF4-205ENST00000472318 GTPBP6O43824 516 aaPredicted RBP14.79□□□□□ -0.04
SCAF4-205ENST00000472318 NACADO15069 1562 aa14.77□□□□□ -0.04
SCAF4-205ENST00000472318 RTN4Q9NQC3 1192 aaKnown RBP14.77□□□□□ -0.05
SCAF4-205ENST00000472318 GPHNQ9NQX3 736 aaPredicted RBP14.75□□□□□ -0.05
SCAF4-205ENST00000472318 SLC34A2O95436 690 aa14.74□□□□□ -0.05
SCAF4-205ENST00000472318 ARSIQ5FYB1 569 aa14.73□□□□□ -0.05
SCAF4-205ENST00000472318 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
SCAF4-205ENST00000472318 CECR2Q9BXF3 1484 aa14.72□□□□□ -0.05
SCAF4-205ENST00000472318 FOXK1P85037 733 aa14.72□□□□□ -0.05
SCAF4-205ENST00000472318 ERBB3P21860 1342 aa14.71□□□□□ -0.05
SCAF4-205ENST00000472318 KHSRPQ92945 711 aaKnown RBP eCLIP14.68□□□□□ -0.065e-8■■■■■ 29.9
SCAF4-205ENST00000472318 VARS2Q5ST30 1063 aaKnown RBP14.67□□□□□ -0.06
SCAF4-205ENST00000472318 KRTAP3-3Q9BYR6 98 aa14.67□□□□□ -0.06
SCAF4-205ENST00000472318 KRTAP3-2Q9BYR7 98 aa14.67□□□□□ -0.06
SCAF4-205ENST00000472318 CRISPLD2Q9H0B8 497 aa14.67□□□□□ -0.06
SCAF4-205ENST00000472318 DSG2Q14126 1118 aa14.66□□□□□ -0.06
SCAF4-205ENST00000472318 PLPP6Q8IY26 295 aa14.65□□□□□ -0.06
SCAF4-205ENST00000472318 PCDHGA4Q9Y5G9 962 aa14.65□□□□□ -0.06
SCAF4-205ENST00000472318 UNC13AQ9UPW8 1703 aa14.65□□□□□ -0.06
SCAF4-205ENST00000472318 PTCD2Q8WV60 388 aaKnown RBP14.61□□□□□ -0.07
SCAF4-205ENST00000472318 BBXQ8WY36 941 aaPredicted RBP14.61□□□□□ -0.07
SCAF4-205ENST00000472318 NCKAP5LQ9HCH0 1330 aa14.61□□□□□ -0.07
SCAF4-205ENST00000472318 CC2D2AQ9P2K1 1620 aa14.6□□□□□ -0.07
SCAF4-205ENST00000472318 ZNF316A6NFI3 1004 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-205ENST00000472318 NUDT7P0C024 238 aa14.6□□□□□ -0.07
SCAF4-205ENST00000472318 ZNF687Q8N1G0 1237 aa14.57□□□□□ -0.08
SCAF4-205ENST00000472318 SPNS2Q8IVW8 549 aa14.56□□□□□ -0.08
SCAF4-205ENST00000472318 PDE4AP27815 886 aa14.55□□□□□ -0.08
SCAF4-205ENST00000472318 PPP1R15BQ5SWA1 713 aa14.55□□□□□ -0.08
SCAF4-205ENST00000472318 KDM4FA0A1W2PPD8 638 aa14.54□□□□□ -0.08
SCAF4-205ENST00000472318 LHX6Q9UPM6 363 aa14.53□□□□□ -0.08
SCAF4-205ENST00000472318 MFSD10Q14728 455 aa14.5□□□□□ -0.09
SCAF4-205ENST00000472318 CADPS2Q86UW7 1296 aa14.49□□□□□ -0.09
SCAF4-205ENST00000472318 OXER1Q8TDS5 423 aa14.48□□□□□ -0.09
SCAF4-205ENST00000472318 MMRN1Q13201 1228 aa14.47□□□□□ -0.09
SCAF4-205ENST00000472318 DDX27Q96GQ7 796 aaKnown RBP14.47□□□□□ -0.09
SCAF4-205ENST00000472318 LARP6Q9BRS8 491 aaKnown RBP14.47□□□□□ -0.09
SCAF4-205ENST00000472318 TBC1D12O60347 775 aa14.46□□□□□ -0.09
SCAF4-205ENST00000472318 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.44□□□□□ -0.1
SCAF4-205ENST00000472318 PSDA5PKW4 1024 aaPredicted RBP14.43□□□□□ -0.1
SCAF4-205ENST00000472318 SPRYD3Q8NCJ5 442 aa14.42□□□□□ -0.1
SCAF4-205ENST00000472318 UPF1Q92900 1129 aaKnown RBP eCLIP14.42□□□□□ -0.1
SCAF4-205ENST00000472318 PBX2P40425 430 aa14.4□□□□□ -0.1
SCAF4-205ENST00000472318 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
SCAF4-205ENST00000472318 POTEEQ6S8J3 1075 aa14.37□□□□□ -0.11
SCAF4-205ENST00000472318 SHROOM4Q9ULL8 1493 aa14.35□□□□□ -0.11
SCAF4-205ENST00000472318 LSM11P83369 360 aaKnown RBP eCLIP14.34□□□□□ -0.11
SCAF4-205ENST00000472318 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
SCAF4-205ENST00000472318 PPP4R3BQ5MIZ7 849 aa14.32□□□□□ -0.12
SCAF4-205ENST00000472318 EMILIN3Q9NT22 766 aa14.32□□□□□ -0.12
SCAF4-205ENST00000472318 PAXIP1Q6ZW49 1069 aaPredicted RBP14.31□□□□□ -0.12
SCAF4-205ENST00000472318 AXIN2Q9Y2T1 843 aa14.3□□□□□ -0.12
SCAF4-205ENST00000472318 CAMK2BQ13554 666 aa14.29□□□□□ -0.12
SCAF4-205ENST00000472318 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
SCAF4-205ENST00000472318 ANO8Q9HCE9 1232 aaPredicted RBP14.28□□□□□ -0.12
SCAF4-205ENST00000472318 CUX2O14529 1486 aa14.27□□□□□ -0.12
SCAF4-205ENST00000472318 ARHGAP33O14559 1287 aa14.27□□□□□ -0.13
SCAF4-205ENST00000472318 EVI5O60447 810 aa14.27□□□□□ -0.13
SCAF4-205ENST00000472318 PTGER2P43116 358 aa14.27□□□□□ -0.13
SCAF4-205ENST00000472318 ANKRD13DQ6ZTN6 518 aa14.27□□□□□ -0.13
SCAF4-205ENST00000472318 MAP3K9P80192 1104 aa14.24□□□□□ -0.13
SCAF4-205ENST00000472318 FOSBP53539 338 aa14.23□□□□□ -0.13
SCAF4-205ENST00000472318 ZNF454Q8N9F8 522 aa14.23□□□□□ -0.13
SCAF4-205ENST00000472318 MYT1LQ9UL68 1186 aa14.23□□□□□ -0.13
SCAF4-205ENST00000472318 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
SCAF4-205ENST00000472318 JPH4Q96JJ6 628 aa14.22□□□□□ -0.13
SCAF4-205ENST00000472318 RNF166Q96A37 237 aaPredicted RBP14.2□□□□□ -0.14
SCAF4-205ENST00000472318 PSEN2P49810 448 aa14.19□□□□□ -0.14
SCAF4-205ENST00000472318 DMRTA1Q5VZB9 504 aa14.18□□□□□ -0.14
SCAF4-205ENST00000472318 BCL2L12Q9HB09 334 aa14.18□□□□□ -0.14
SCAF4-205ENST00000472318 ADGRD1Q6QNK2 874 aa14.17□□□□□ -0.14
SCAF4-205ENST00000472318 TK2O00142 265 aa14.16□□□□□ -0.14
SCAF4-205ENST00000472318 KCNK17Q96T54 332 aa14.16□□□□□ -0.14
SCAF4-205ENST00000472318 DPYSL4O14531 572 aa14.14□□□□□ -0.15
SCAF4-205ENST00000472318 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
SCAF4-205ENST00000472318 ZDHHC16Q969W1 377 aa14.12□□□□□ -0.15
SCAF4-205ENST00000472318 PCDHGA10Q9Y5H3 936 aa14.1□□□□□ -0.15
SCAF4-205ENST00000472318 HRO43593 1189 aa14.09□□□□□ -0.15
SCAF4-205ENST00000472318 ADAM33Q9BZ11 813 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms