RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 FANCAO15360 1455 aa22.77■■□□□ 1.24
SMARCD3-207ENST00000472103 TEX14Q8IWB6 1497 aa22.76■■□□□ 1.23
SMARCD3-207ENST00000472103 ITSN2Q9NZM3 1697 aa22.76■■□□□ 1.23
SMARCD3-207ENST00000472103 MYOM3Q5VTT5 1437 aa22.74■■□□□ 1.23
SMARCD3-207ENST00000472103 NEO1Q92859 1461 aa22.73■■□□□ 1.23
SMARCD3-207ENST00000472103 SAMD9LQ8IVG5 1584 aa22.72■■□□□ 1.23
SMARCD3-207ENST00000472103 EFCAB2Q5VUJ9 269 aa22.72■■□□□ 1.23
SMARCD3-207ENST00000472103 CFDP1Q9UEE9 299 aaPredicted RBP22.72■■□□□ 1.23
SMARCD3-207ENST00000472103 AKNAQ7Z591 1439 aa22.72■■□□□ 1.23
SMARCD3-207ENST00000472103 COL17A1Q9UMD9 1497 aaPredicted RBP22.72■■□□□ 1.23
SMARCD3-207ENST00000472103 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.22
SMARCD3-207ENST00000472103 ZNF644Q9H582 1327 aaPredicted RBP22.7■■□□□ 1.22
SMARCD3-207ENST00000472103 CFAP74Q9C0B2 1584 aa22.7■■□□□ 1.22
SMARCD3-207ENST00000472103 ARHGEF12Q9NZN5 1544 aa22.67■■□□□ 1.22
SMARCD3-207ENST00000472103 ABCC1P33527 1531 aa22.66■■□□□ 1.22
SMARCD3-207ENST00000472103 ADGRL1O94910 1474 aa22.66■■□□□ 1.22
SMARCD3-207ENST00000472103 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
SMARCD3-207ENST00000472103 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
SMARCD3-207ENST00000472103 CAMSAP2Q08AD1 1489 aa22.64■■□□□ 1.21
SMARCD3-207ENST00000472103 SCAPERQ9BY12 1400 aa22.64■■□□□ 1.21
SMARCD3-207ENST00000472103 KDM6BO15054 1643 aa22.64■■□□□ 1.21
SMARCD3-207ENST00000472103 PTPN23Q9H3S7 1636 aa22.63■■□□□ 1.21
SMARCD3-207ENST00000472103 SYCP2Q9BX26 1530 aa22.62■■□□□ 1.21
SMARCD3-207ENST00000472103 FRMPD1Q5SYB0 1578 aa22.61■■□□□ 1.21
SMARCD3-207ENST00000472103 RAPGEF3O95398 923 aa22.6■■□□□ 1.21
SMARCD3-207ENST00000472103 HNRNPMP52272 730 aaKnown RBP eCLIP22.6■■□□□ 1.21
SMARCD3-207ENST00000472103 TCOF1Q13428 1488 aaKnown RBP22.6■■□□□ 1.21
SMARCD3-207ENST00000472103 TRAPPC8Q9Y2L5 1435 aa22.59■■□□□ 1.21
SMARCD3-207ENST00000472103 RICTORQ6R327 1708 aa22.59■■□□□ 1.21
SMARCD3-207ENST00000472103 DENND4BO75064 1496 aaPredicted RBP22.59■■□□□ 1.21
SMARCD3-207ENST00000472103 MBD5Q9P267 1494 aa22.58■■□□□ 1.2
SMARCD3-207ENST00000472103 KIAA1107Q9UPP5 1409 aa22.57■■□□□ 1.2
SMARCD3-207ENST00000472103 PLEKHH2Q8IVE3 1493 aa22.56■■□□□ 1.2
SMARCD3-207ENST00000472103 POGZQ7Z3K3 1410 aa22.56■■□□□ 1.2
SMARCD3-207ENST00000472103 AFAP1Q8N556 730 aa22.54■■□□□ 1.2
SMARCD3-207ENST00000472103 RRBP1Q9P2E9 1410 aaKnown RBP22.54■■□□□ 1.2
SMARCD3-207ENST00000472103 FAM50AQ14320 339 aaKnown RBP22.52■■□□□ 1.2
SMARCD3-207ENST00000472103 KDM5CP41229 1560 aa22.5■■□□□ 1.19
SMARCD3-207ENST00000472103 ARHGEF5Q12774 1597 aa22.5■■□□□ 1.19
SMARCD3-207ENST00000472103 ZNF518AQ6AHZ1 1483 aa22.49■■□□□ 1.19
SMARCD3-207ENST00000472103 CCDC141Q6ZP82 1450 aa22.48■■□□□ 1.19
SMARCD3-207ENST00000472103 ABCC5O15440 1437 aa22.48■■□□□ 1.19
SMARCD3-207ENST00000472103 ZMYM4Q5VZL5 1548 aa22.47■■□□□ 1.19
SMARCD3-207ENST00000472103 DNMT1P26358 1616 aaKnown RBP22.47■■□□□ 1.19
SMARCD3-207ENST00000472103 DAPK1P53355 1430 aa22.45■■□□□ 1.18
SMARCD3-207ENST00000472103 KIDINS220Q9ULH0 1771 aa22.43■■□□□ 1.18
SMARCD3-207ENST00000472103 CROCC2H7BZ55 1655 aa22.43■■□□□ 1.18
SMARCD3-207ENST00000472103 YEATS2Q9ULM3 1422 aa22.43■■□□□ 1.18
SMARCD3-207ENST00000472103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.43■■□□□ 1.18
SMARCD3-207ENST00000472103 HECW2Q9P2P5 1572 aa22.42■■□□□ 1.18
SMARCD3-207ENST00000472103 PTPRKQ15262 1439 aa22.42■■□□□ 1.18
SMARCD3-207ENST00000472103 INO80Q9ULG1 1556 aaPredicted RBP22.42■■□□□ 1.18
SMARCD3-207ENST00000472103 RSPH4AQ5TD94 716 aa22.41■■□□□ 1.18
SMARCD3-207ENST00000472103 ZFYVE16Q7Z3T8 1539 aa22.41■■□□□ 1.18
SMARCD3-207ENST00000472103 MLH3Q9UHC1 1453 aa22.41■■□□□ 1.18
SMARCD3-207ENST00000472103 SPAG9O60271 1321 aaKnown RBP22.4■■□□□ 1.18
SMARCD3-207ENST00000472103 MAST1Q9Y2H9 1570 aa22.39■■□□□ 1.18
SMARCD3-207ENST00000472103 ATP7AQ04656 1500 aa22.39■■□□□ 1.17
SMARCD3-207ENST00000472103 ABCA6Q8N139 1617 aa22.39■■□□□ 1.17
SMARCD3-207ENST00000472103 C9orf84Q5VXU9 1444 aa22.38■■□□□ 1.17
SMARCD3-207ENST00000472103 ITGAEP38570 1179 aa22.37■■□□□ 1.17
SMARCD3-207ENST00000472103 DIP2CQ9Y2E4 1556 aa22.37■■□□□ 1.17
SMARCD3-207ENST00000472103 ARHGEF40Q8TER5 1519 aa22.36■■□□□ 1.17
SMARCD3-207ENST00000472103 MAGI2Q86UL8 1455 aa22.36■■□□□ 1.17
SMARCD3-207ENST00000472103 SHANK2Q9UPX8 1470 aa22.36■■□□□ 1.17
SMARCD3-207ENST00000472103 TSPY4P0CV99 314 aa22.36■■□□□ 1.17
SMARCD3-207ENST00000472103 TSPY10P0CW01 314 aa22.36■■□□□ 1.17
SMARCD3-207ENST00000472103 CHIC2Q9UKJ5 165 aa22.36■■□□□ 1.17
SMARCD3-207ENST00000472103 MYT1LQ9UL68 1186 aa22.36■■□□□ 1.17
SMARCD3-207ENST00000472103 RTEL1-TNFRSF6BF6WH68 1400 aa22.35■■□□□ 1.17
SMARCD3-207ENST00000472103 SIGLEC1Q9BZZ2 1709 aa22.33■■□□□ 1.17
SMARCD3-207ENST00000472103 ADGBQ8N7X0 1667 aa22.32■■□□□ 1.16
SMARCD3-207ENST00000472103 ATP10AO60312 1499 aa22.29■■□□□ 1.16
SMARCD3-207ENST00000472103 ADGRL2O95490 1459 aa22.29■■□□□ 1.16
SMARCD3-207ENST00000472103 PLXNC1O60486 1568 aa22.29■■□□□ 1.16
SMARCD3-207ENST00000472103 NCOA1Q15788 1441 aa22.26■■□□□ 1.15
SMARCD3-207ENST00000472103 RRP7BPQ9NSQ0 103 aa22.26■■□□□ 1.15
SMARCD3-207ENST00000472103 A2MP01023 1474 aa22.24■■□□□ 1.15
SMARCD3-207ENST00000472103 ANKRD30AQ9BXX3 1397 aa22.24■■□□□ 1.15
SMARCD3-207ENST00000472103 REREQ9P2R6 1566 aa22.23■■□□□ 1.15
SMARCD3-207ENST00000472103 KIF15Q9NS87 1388 aa22.23■■□□□ 1.15
SMARCD3-207ENST00000472103 ROCK1Q13464 1354 aa22.22■■□□□ 1.15
SMARCD3-207ENST00000472103 DHX29Q7Z478 1369 aaKnown RBP22.21■■□□□ 1.15
SMARCD3-207ENST00000472103 DUOX2Q9NRD8 1548 aa22.19■■□□□ 1.14
SMARCD3-207ENST00000472103 AGLP35573 1532 aa22.16■■□□□ 1.14
SMARCD3-207ENST00000472103 TRIM26Q12899 539 aaPredicted RBP22.15■■□□□ 1.14
SMARCD3-207ENST00000472103 NAIPQ13075 1403 aa22.14■■□□□ 1.14
SMARCD3-207ENST00000472103 ARID4BQ4LE39 1312 aaPredicted RBP22.13■■□□□ 1.13
SMARCD3-207ENST00000472103 GCC2Q8IWJ2 1684 aa22.13■■□□□ 1.13
SMARCD3-207ENST00000472103 ERBINQ96RT1 1412 aa22.12■■□□□ 1.13
SMARCD3-207ENST00000472103 ANKRD50Q9ULJ7 1429 aa22.12■■□□□ 1.13
SMARCD3-207ENST00000472103 BCORL1Q5H9F3 1711 aa22.11■■□□□ 1.13
SMARCD3-207ENST00000472103 KIF3BO15066 747 aa22.11■■□□□ 1.13
SMARCD3-207ENST00000472103 MLECQ14165 292 aa22.11■■□□□ 1.13
SMARCD3-207ENST00000472103 HFM1A2PYH4 1435 aa22.11■■□□□ 1.13
SMARCD3-207ENST00000472103 EIF2AK4Q9P2K8 1649 aaKnown RBP22.1■■□□□ 1.13
SMARCD3-207ENST00000472103 MROH1Q8NDA8 1641 aa22.07■■□□□ 1.12
SMARCD3-207ENST00000472103 GGT6Q6P531 493 aa22.06■■□□□ 1.12
SMARCD3-207ENST00000472103 RNF17Q9BXT8 1623 aaKnown RBP22.06■■□□□ 1.12
SMARCD3-207ENST00000472103 ADAMTSL3P82987 1691 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms