RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 CDC42BPBQ9Y5S2 1711 aa29.72■■■□□ 2.35
CHMP2B-204ENST00000472024 CFDP1Q9UEE9 299 aaPredicted RBP29.67■■■□□ 2.34
CHMP2B-204ENST00000472024 MAP3K4Q9Y6R4 1608 aa29.66■■■□□ 2.34
CHMP2B-204ENST00000472024 CAMSAP2Q08AD1 1489 aa29.62■■■□□ 2.33
CHMP2B-204ENST00000472024 ARHGAP5Q13017 1502 aa29.61■■■□□ 2.33
CHMP2B-204ENST00000472024 CD109Q6YHK3 1445 aa29.61■■■□□ 2.33
CHMP2B-204ENST00000472024 SAMD9LQ8IVG5 1584 aa29.6■■■□□ 2.33
CHMP2B-204ENST00000472024 PLEKHH2Q8IVE3 1493 aa29.59■■■□□ 2.33
CHMP2B-204ENST00000472024 KIAA1107Q9UPP5 1409 aa29.58■■■□□ 2.33
CHMP2B-204ENST00000472024 EFCAB2Q5VUJ9 269 aa29.57■■■□□ 2.32
CHMP2B-204ENST00000472024 KIF13AQ9H1H9 1805 aa29.56■■■□□ 2.32
CHMP2B-204ENST00000472024 ARHGEF5Q12774 1597 aa29.55■■■□□ 2.32
CHMP2B-204ENST00000472024 DNMT1P26358 1616 aaKnown RBP29.54■■■□□ 2.32
CHMP2B-204ENST00000472024 FAM50AQ14320 339 aaKnown RBP29.54■■■□□ 2.32
CHMP2B-204ENST00000472024 CFAP74Q9C0B2 1584 aa29.54■■■□□ 2.32
CHMP2B-204ENST00000472024 FANCAO15360 1455 aa29.54■■■□□ 2.32
CHMP2B-204ENST00000472024 MBD5Q9P267 1494 aa29.54■■■□□ 2.32
CHMP2B-204ENST00000472024 ZNF644Q9H582 1327 aaPredicted RBP29.53■■■□□ 2.32
CHMP2B-204ENST00000472024 ABCC1P33527 1531 aa29.53■■■□□ 2.32
CHMP2B-204ENST00000472024 PCGF6Q9BYE7 350 aa29.52■■■□□ 2.32
CHMP2B-204ENST00000472024 NEO1Q92859 1461 aa29.51■■■□□ 2.31
CHMP2B-204ENST00000472024 FAM69CQ0P6D2 419 aa29.51■■■□□ 2.31
CHMP2B-204ENST00000472024 ABCC5O15440 1437 aa29.48■■■□□ 2.31
CHMP2B-204ENST00000472024 DAPK1P53355 1430 aa29.47■■■□□ 2.31
CHMP2B-204ENST00000472024 PPRC1Q5VV67 1664 aaKnown RBP29.47■■■□□ 2.31
CHMP2B-204ENST00000472024 RSPH4AQ5TD94 716 aa29.46■■■□□ 2.31
CHMP2B-204ENST00000472024 SHANK2Q9UPX8 1470 aa29.46■■■□□ 2.31
CHMP2B-204ENST00000472024 PTPRKQ15262 1439 aa29.45■■■□□ 2.31
CHMP2B-204ENST00000472024 SYCP2Q9BX26 1530 aa29.45■■■□□ 2.3
CHMP2B-204ENST00000472024 ARHGEF12Q9NZN5 1544 aa29.45■■■□□ 2.3
CHMP2B-204ENST00000472024 AKNAQ7Z591 1439 aa29.45■■■□□ 2.3
CHMP2B-204ENST00000472024 ZNF777Q9ULD5 760 aaPredicted RBP29.44■■■□□ 2.3
CHMP2B-204ENST00000472024 CROCC2H7BZ55 1655 aa29.44■■■□□ 2.3
CHMP2B-204ENST00000472024 CCDC141Q6ZP82 1450 aa29.42■■■□□ 2.3
CHMP2B-204ENST00000472024 TEX14Q8IWB6 1497 aa29.42■■■□□ 2.3
CHMP2B-204ENST00000472024 ADGRL1O94910 1474 aa29.4■■■□□ 2.3
CHMP2B-204ENST00000472024 MAST1Q9Y2H9 1570 aa29.39■■■□□ 2.29
CHMP2B-204ENST00000472024 ROCK1Q13464 1354 aa29.39■■■□□ 2.29
CHMP2B-204ENST00000472024 ADGRL2O95490 1459 aa29.38■■■□□ 2.29
CHMP2B-204ENST00000472024 HNRNPMP52272 730 aaKnown RBP eCLIP29.34■■■□□ 2.29
CHMP2B-204ENST00000472024 SCAPERQ9BY12 1400 aa29.33■■■□□ 2.29
CHMP2B-204ENST00000472024 TRAPPC8Q9Y2L5 1435 aa29.33■■■□□ 2.29
CHMP2B-204ENST00000472024 HFM1A2PYH4 1435 aa29.31■■■□□ 2.28
CHMP2B-204ENST00000472024 C9orf84Q5VXU9 1444 aa29.3■■■□□ 2.28
CHMP2B-204ENST00000472024 ADGBQ8N7X0 1667 aa29.3■■■□□ 2.28
CHMP2B-204ENST00000472024 POGZQ7Z3K3 1410 aa29.29■■■□□ 2.28
CHMP2B-204ENST00000472024 KDM5CP41229 1560 aa29.29■■■□□ 2.28
CHMP2B-204ENST00000472024 ITGAEP38570 1179 aa29.28■■■□□ 2.28
CHMP2B-204ENST00000472024 ZNF518AQ6AHZ1 1483 aa29.28■■■□□ 2.28
CHMP2B-204ENST00000472024 RTEL1-TNFRSF6BF6WH68 1400 aa29.28■■■□□ 2.28
CHMP2B-204ENST00000472024 NCOA1Q15788 1441 aa29.27■■■□□ 2.28
CHMP2B-204ENST00000472024 TSPOAP1O95153 1857 aa29.26■■■□□ 2.27
CHMP2B-204ENST00000472024 TRHP20396 242 aaPredicted RBP29.26■■■□□ 2.27
CHMP2B-204ENST00000472024 DENND4BO75064 1496 aaPredicted RBP29.25■■■□□ 2.27
CHMP2B-204ENST00000472024 PLXNC1O60486 1568 aa29.24■■■□□ 2.27
CHMP2B-204ENST00000472024 TSPY4P0CV99 314 aa29.24■■■□□ 2.27
CHMP2B-204ENST00000472024 TSPY10P0CW01 314 aa29.24■■■□□ 2.27
CHMP2B-204ENST00000472024 NAIPQ13075 1403 aa29.24■■■□□ 2.27
CHMP2B-204ENST00000472024 INO80Q9ULG1 1556 aaPredicted RBP29.23■■■□□ 2.27
CHMP2B-204ENST00000472024 GCC2Q8IWJ2 1684 aa29.23■■■□□ 2.27
CHMP2B-204ENST00000472024 ZFYVE16Q7Z3T8 1539 aa29.22■■■□□ 2.27
CHMP2B-204ENST00000472024 RICTORQ6R327 1708 aa29.21■■■□□ 2.27
CHMP2B-204ENST00000472024 ANKRD30AQ9BXX3 1397 aa29.21■■■□□ 2.27
CHMP2B-204ENST00000472024 SETD5Q9C0A6 1442 aa29.2■■■□□ 2.27
CHMP2B-204ENST00000472024 HRCP23327 699 aa29.2■■■□□ 2.26
CHMP2B-204ENST00000472024 MLH3Q9UHC1 1453 aa29.19■■■□□ 2.26
CHMP2B-204ENST00000472024 FRMPD1Q5SYB0 1578 aa29.18■■■□□ 2.26
CHMP2B-204ENST00000472024 AFAP1Q8N556 730 aa29.18■■■□□ 2.26
CHMP2B-204ENST00000472024 ZMYM4Q5VZL5 1548 aa29.17■■■□□ 2.26
CHMP2B-204ENST00000472024 CHIC2Q9UKJ5 165 aa29.16■■■□□ 2.26
CHMP2B-204ENST00000472024 ATP7AQ04656 1500 aa29.15■■■□□ 2.26
CHMP2B-204ENST00000472024 SPAG9O60271 1321 aaKnown RBP29.15■■■□□ 2.26
CHMP2B-204ENST00000472024 HECW2Q9P2P5 1572 aa29.13■■■□□ 2.25
CHMP2B-204ENST00000472024 KIDINS220Q9ULH0 1771 aa29.11■■■□□ 2.25
CHMP2B-204ENST00000472024 RAB3GAP2Q9H2M9 1393 aa29.11■■■□□ 2.25
CHMP2B-204ENST00000472024 COL17A1Q9UMD9 1497 aaPredicted RBP29.1■■■□□ 2.25
CHMP2B-204ENST00000472024 KIF15Q9NS87 1388 aa29.1■■■□□ 2.25
CHMP2B-204ENST00000472024 MAGI2Q86UL8 1455 aa29.1■■■□□ 2.25
CHMP2B-204ENST00000472024 RRP7BPQ9NSQ0 103 aa29.09■■■□□ 2.25
CHMP2B-204ENST00000472024 DUOX2Q9NRD8 1548 aa29.08■■■□□ 2.25
CHMP2B-204ENST00000472024 ACIN1Q9UKV3 1341 aaKnown RBP29.07■■■□□ 2.24
CHMP2B-204ENST00000472024 RAPGEF3O95398 923 aa29.06■■■□□ 2.24
CHMP2B-204ENST00000472024 ANKRD50Q9ULJ7 1429 aa29.04■■■□□ 2.24
CHMP2B-204ENST00000472024 ERBINQ96RT1 1412 aa29.03■■■□□ 2.24
CHMP2B-204ENST00000472024 KDM6BO15054 1643 aa29.02■■■□□ 2.24
CHMP2B-204ENST00000472024 ABCA6Q8N139 1617 aa28.99■■■□□ 2.23
CHMP2B-204ENST00000472024 DIP2CQ9Y2E4 1556 aa28.98■■■□□ 2.23
CHMP2B-204ENST00000472024 DHX29Q7Z478 1369 aaKnown RBP28.97■■■□□ 2.23
CHMP2B-204ENST00000472024 EIF2AK4Q9P2K8 1649 aaKnown RBP28.95■■■□□ 2.23
CHMP2B-204ENST00000472024 REREQ9P2R6 1566 aa28.95■■■□□ 2.22
CHMP2B-204ENST00000472024 A2MP01023 1474 aa28.93■■■□□ 2.22
CHMP2B-204ENST00000472024 BCORL1Q5H9F3 1711 aa28.93■■■□□ 2.22
CHMP2B-204ENST00000472024 AEBP2Q6ZN18 517 aaPredicted RBP28.92■■■□□ 2.22
CHMP2B-204ENST00000472024 YEATS2Q9ULM3 1422 aa28.92■■■□□ 2.22
CHMP2B-204ENST00000472024 ARHGEF40Q8TER5 1519 aa28.91■■■□□ 2.22
CHMP2B-204ENST00000472024 KDM5DQ9BY66 1539 aa28.91■■■□□ 2.22
CHMP2B-204ENST00000472024 UNC13BO14795 1591 aa28.9■■■□□ 2.22
CHMP2B-204ENST00000472024 ATP10AO60312 1499 aa28.87■■■□□ 2.21
CHMP2B-204ENST00000472024 DEPDC5O75140 1603 aa28.87■■■□□ 2.21
CHMP2B-204ENST00000472024 DHX57Q6P158 1386 aaKnown RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms