RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 EFCAB3Q8N7B9 438 aa7.77□□□□□ -1.17
SCN3A-207ENST00000471697 SOX12O15370 315 aa7.72□□□□□ -1.17
SCN3A-207ENST00000471697 KHSRPQ92945 711 aaKnown RBP eCLIP7.7□□□□□ -1.18
SCN3A-207ENST00000471697 MS4A4AQ96JQ5 239 aa7.7□□□□□ -1.18
SCN3A-207ENST00000471697 POTEEQ6S8J3 1075 aa7.69□□□□□ -1.18
SCN3A-207ENST00000471697 SPOCK2Q92563 424 aa7.69□□□□□ -1.18
SCN3A-207ENST00000471697 CIZ1Q9ULV3 898 aaPredicted RBP7.68□□□□□ -1.18
SCN3A-207ENST00000471697 TRIM41Q8WV44 630 aa7.67□□□□□ -1.18
SCN3A-207ENST00000471697 RGS20O76081 388 aa7.66□□□□□ -1.18
SCN3A-207ENST00000471697 ADGRD1Q6QNK2 874 aa7.64□□□□□ -1.19
SCN3A-207ENST00000471697 SLC34A2O95436 690 aa7.62□□□□□ -1.19
SCN3A-207ENST00000471697 NUDT7P0C024 238 aa7.62□□□□□ -1.19
SCN3A-207ENST00000471697 LHX6Q9UPM6 363 aa7.62□□□□□ -1.19
SCN3A-207ENST00000471697 AXIN2Q9Y2T1 843 aa7.62□□□□□ -1.19
SCN3A-207ENST00000471697 TK2O00142 265 aa7.61□□□□□ -1.19
SCN3A-207ENST00000471697 KIF3CO14782 793 aa7.61□□□□□ -1.19
SCN3A-207ENST00000471697 IFNLR1Q8IU57 520 aaPredicted RBP7.61□□□□□ -1.19
SCN3A-207ENST00000471697 PHF8Q9UPP1 1060 aa7.61□□□□□ -1.19
SCN3A-207ENST00000471697 ARHGAP33O14559 1287 aa7.6□□□□□ -1.19
SCN3A-207ENST00000471697 HRO43593 1189 aa7.59□□□□□ -1.19
SCN3A-207ENST00000471697 IFFO2Q5TF58 517 aa7.59□□□□□ -1.19
SCN3A-207ENST00000471697 PSDA5PKW4 1024 aaPredicted RBP7.58□□□□□ -1.2
SCN3A-207ENST00000471697 PCDHGA4Q9Y5G9 962 aa7.57□□□□□ -1.2
SCN3A-207ENST00000471697 NLRP6P59044 892 aa7.55□□□□□ -1.2
SCN3A-207ENST00000471697 FBXO22Q8NEZ5 403 aa7.55□□□□□ -1.2
SCN3A-207ENST00000471697 IRX2Q9BZI1 471 aaPredicted RBP7.55□□□□□ -1.2
SCN3A-207ENST00000471697 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.54□□□□□ -1.2
SCN3A-207ENST00000471697 C2orf72A6NCS6 295 aa7.54□□□□□ -1.2
SCN3A-207ENST00000471697 RIOK3O14730 519 aaKnown RBP7.54□□□□□ -1.2
SCN3A-207ENST00000471697 ZFP91Q96JP5 570 aaPredicted RBP7.54□□□□□ -1.2
SCN3A-207ENST00000471697 VGFO15240 615 aaPredicted RBP7.53□□□□□ -1.2
SCN3A-207ENST00000471697 KDM4FA0A1W2PPD8 638 aa7.52□□□□□ -1.21
SCN3A-207ENST00000471697 RNF25Q96BH1 459 aaPredicted RBP7.51□□□□□ -1.21
SCN3A-207ENST00000471697 KCTD12Q96CX2 325 aaKnown RBP7.51□□□□□ -1.21
SCN3A-207ENST00000471697 DMRTA1Q5VZB9 504 aa7.5□□□□□ -1.21
SCN3A-207ENST00000471697 A0A0G2JS52 829 aa7.48□□□□□ -1.21
SCN3A-207ENST00000471697 PSEN2P49810 448 aa7.46□□□□□ -1.22
SCN3A-207ENST00000471697 PTCD2Q8WV60 388 aaKnown RBP7.44□□□□□ -1.22
SCN3A-207ENST00000471697 STAC3Q96MF2 364 aa7.44□□□□□ -1.22
SCN3A-207ENST00000471697 MFRPQ9BY79 579 aa7.44□□□□□ -1.22
SCN3A-207ENST00000471697 PPP4R3BQ5MIZ7 849 aa7.42□□□□□ -1.22
SCN3A-207ENST00000471697 TMC2Q8TDI7 906 aa7.42□□□□□ -1.22
SCN3A-207ENST00000471697 PTPN5P54829 565 aa7.4□□□□□ -1.22
SCN3A-207ENST00000471697 SLC4A5Q9BY07 1137 aa7.4□□□□□ -1.22
SCN3A-207ENST00000471697 VPS9D1Q9Y2B5 631 aa7.4□□□□□ -1.22
SCN3A-207ENST00000471697 BCL11BQ9C0K0 894 aaPredicted RBP7.39□□□□□ -1.23
SCN3A-207ENST00000471697 SLC24A1O60721 1099 aa7.38□□□□□ -1.23
SCN3A-207ENST00000471697 THSD4Q6ZMP0 1018 aa7.38□□□□□ -1.23
SCN3A-207ENST00000471697 TAOK2Q9UL54 1235 aa7.38□□□□□ -1.23
SCN3A-207ENST00000471697 KCNH8Q96L42 1107 aa7.37□□□□□ -1.23
SCN3A-207ENST00000471697 BHMG1C9JSJ3 638 aaPredicted RBP7.35□□□□□ -1.23
SCN3A-207ENST00000471697 KCNK17Q96T54 332 aa7.35□□□□□ -1.23
SCN3A-207ENST00000471697 Q6ZNB5 142 aa7.33□□□□□ -1.24
SCN3A-207ENST00000471697 STK24Q9Y6E0 443 aa7.33□□□□□ -1.24
SCN3A-207ENST00000471697 FOXK1P85037 733 aa7.32□□□□□ -1.24
SCN3A-207ENST00000471697 ITGBL1O95965 494 aaPredicted RBP7.31□□□□□ -1.24
SCN3A-207ENST00000471697 TBC1D12O60347 775 aa7.3□□□□□ -1.24
SCN3A-207ENST00000471697 BCL2L12Q9HB09 334 aa7.3□□□□□ -1.24
SCN3A-207ENST00000471697 WNT2BQ93097 391 aa7.29□□□□□ -1.24
SCN3A-207ENST00000471697 LAPTM4AQ15012 233 aa7.28□□□□□ -1.24
SCN3A-207ENST00000471697 PLPP6Q8IY26 295 aa7.28□□□□□ -1.24
SCN3A-207ENST00000471697 GOLGA8CPA6NN73 597 aa7.27□□□□□ -1.25
SCN3A-207ENST00000471697 STK25O00506 426 aa7.27□□□□□ -1.25
SCN3A-207ENST00000471697 MRPL50Q8N5N7 158 aaKnown RBP7.26□□□□□ -1.25
SCN3A-207ENST00000471697 ZBED2Q9BTP6 218 aa7.26□□□□□ -1.25
SCN3A-207ENST00000471697 GPHNQ9NQX3 736 aaPredicted RBP7.26□□□□□ -1.25
SCN3A-207ENST00000471697 LCE2BO14633 110 aa7.25□□□□□ -1.25
SCN3A-207ENST00000471697 PPP1R37O75864 691 aa7.24□□□□□ -1.25
SCN3A-207ENST00000471697 PTPREP23469 700 aa7.23□□□□□ -1.25
SCN3A-207ENST00000471697 NBPF3Q9H094 633 aa7.23□□□□□ -1.25
SCN3A-207ENST00000471697 ZNF454Q8N9F8 522 aa7.22□□□□□ -1.25
SCN3A-207ENST00000471697 OXER1Q8TDS5 423 aa7.22□□□□□ -1.25
SCN3A-207ENST00000471697 FOSBP53539 338 aa7.21□□□□□ -1.26
SCN3A-207ENST00000471697 DSG2Q14126 1118 aa7.21□□□□□ -1.26
SCN3A-207ENST00000471697 TRAF7Q6Q0C0 670 aa7.21□□□□□ -1.26
SCN3A-207ENST00000471697 NYAP1Q6ZVC0 841 aa7.2□□□□□ -1.26
SCN3A-207ENST00000471697 ANKK1Q8NFD2 765 aa7.16□□□□□ -1.26
SCN3A-207ENST00000471697 JPH4Q96JJ6 628 aa7.16□□□□□ -1.26
SCN3A-207ENST00000471697 ANO8Q9HCE9 1232 aaPredicted RBP7.16□□□□□ -1.26
SCN3A-207ENST00000471697 KCNC4Q03721 635 aa7.15□□□□□ -1.26
SCN3A-207ENST00000471697 RABGEF1Q9UJ41 708 aa7.14□□□□□ -1.27
SCN3A-207ENST00000471697 SOWAHBA6NEL2 793 aa7.13□□□□□ -1.27
SCN3A-207ENST00000471697 GFRA3O60609 400 aa7.13□□□□□ -1.27
SCN3A-207ENST00000471697 LAPTM4BQ86VI4 370 aa7.12□□□□□ -1.27
SCN3A-207ENST00000471697 ZDHHC16Q969W1 377 aa7.12□□□□□ -1.27
SCN3A-207ENST00000471697 ADAM33Q9BZ11 813 aa7.12□□□□□ -1.27
SCN3A-207ENST00000471697 NRG2O14511 850 aaPredicted RBP7.11□□□□□ -1.27
SCN3A-207ENST00000471697 PPP1R3GB7ZBB8 358 aa7.1□□□□□ -1.27
SCN3A-207ENST00000471697 BCAMP50895 628 aa7.1□□□□□ -1.27
SCN3A-207ENST00000471697 UPF1Q92900 1129 aaKnown RBP eCLIP7.1□□□□□ -1.27
SCN3A-207ENST00000471697 ECM2O94769 699 aaPredicted RBP7.07□□□□□ -1.28
SCN3A-207ENST00000471697 WBP1LQ9NX94 342 aa7.07□□□□□ -1.28
SCN3A-207ENST00000471697 ONECUT3O60422 494 aaPredicted RBP7.06□□□□□ -1.28
SCN3A-207ENST00000471697 ZNF787Q6DD87 383 aa7.06□□□□□ -1.28
SCN3A-207ENST00000471697 ZFRQ96KR1 1074 aaKnown RBP7.06□□□□□ -1.28
SCN3A-207ENST00000471697 CRISPLD2Q9H0B8 497 aa7.06□□□□□ -1.28
SCN3A-207ENST00000471697 RGL2O15211 777 aa7.05□□□□□ -1.28
SCN3A-207ENST00000471697 PROX2Q3B8N5 592 aa7.05□□□□□ -1.28
SCN3A-207ENST00000471697 EVI5O60447 810 aa7.04□□□□□ -1.28
SCN3A-207ENST00000471697 PPP1R15BQ5SWA1 713 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms