RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 PHLDB1Q86UU1 1377 aa39.58■■■■□ 3.93
COL15A1-203ENST00000471477 KANK4Q5T7N3 995 aaPredicted RBP39.57■■■■□ 3.92
COL15A1-203ENST00000471477 AKNAQ7Z591 1439 aa39.54■■■■□ 3.92
COL15A1-203ENST00000471477 NCOA2Q15596 1464 aa39.52■■■■□ 3.92
COL15A1-203ENST00000471477 GPATCH8Q9UKJ3 1502 aaKnown RBP39.52■■■■□ 3.92
COL15A1-203ENST00000471477 CCNB3Q8WWL7 1395 aa39.5■■■■□ 3.91
COL15A1-203ENST00000471477 EFCAB2Q5VUJ9 269 aa39.49■■■■□ 3.91
COL15A1-203ENST00000471477 ITSN2Q9NZM3 1697 aa39.47■■■■□ 3.91
COL15A1-203ENST00000471477 ADGRL1O94910 1474 aa39.44■■■■□ 3.9
COL15A1-203ENST00000471477 FRMPD1Q5SYB0 1578 aa39.4■■■■□ 3.9
COL15A1-203ENST00000471477 RICTORQ6R327 1708 aa39.4■■■■□ 3.9
COL15A1-203ENST00000471477 DENND4BO75064 1496 aaPredicted RBP39.38■■■■□ 3.9
COL15A1-203ENST00000471477 SCAPERQ9BY12 1400 aa39.36■■■■□ 3.89
COL15A1-203ENST00000471477 RAPGEF3O95398 923 aa39.36■■■■□ 3.89
COL15A1-203ENST00000471477 SAMD9LQ8IVG5 1584 aa39.36■■■■□ 3.89
COL15A1-203ENST00000471477 CFDP1Q9UEE9 299 aaPredicted RBP39.35■■■■□ 3.89
COL15A1-203ENST00000471477 ABCC1P33527 1531 aa39.34■■■■□ 3.89
COL15A1-203ENST00000471477 ZNF777Q9ULD5 760 aaPredicted RBP39.31■■■■□ 3.88
COL15A1-203ENST00000471477 POGZQ7Z3K3 1410 aa39.28■■■■□ 3.88
COL15A1-203ENST00000471477 ARHGEF12Q9NZN5 1544 aa39.25■■■■□ 3.87
COL15A1-203ENST00000471477 SYCP2Q9BX26 1530 aa39.23■■■■□ 3.87
COL15A1-203ENST00000471477 ZMYM4Q5VZL5 1548 aa39.21■■■■□ 3.87
COL15A1-203ENST00000471477 MYOM3Q5VTT5 1437 aa39.21■■■■□ 3.87
COL15A1-203ENST00000471477 ZNF518AQ6AHZ1 1483 aa39.2■■■■□ 3.87
COL15A1-203ENST00000471477 PLEKHH2Q8IVE3 1493 aa39.2■■■■□ 3.87
COL15A1-203ENST00000471477 ZNF644Q9H582 1327 aaPredicted RBP39.17■■■■□ 3.86
COL15A1-203ENST00000471477 TRAPPC8Q9Y2L5 1435 aa39.17■■■■□ 3.86
COL15A1-203ENST00000471477 CAMSAP2Q08AD1 1489 aa39.16■■■■□ 3.86
COL15A1-203ENST00000471477 KDM5CP41229 1560 aa39.16■■■■□ 3.86
COL15A1-203ENST00000471477 KIAA1107Q9UPP5 1409 aa39.16■■■■□ 3.86
COL15A1-203ENST00000471477 AFAP1Q8N556 730 aa39.13■■■■□ 3.85
COL15A1-203ENST00000471477 HNRNPMP52272 730 aaKnown RBP eCLIP39.12■■■■□ 3.85
COL15A1-203ENST00000471477 MIA2Q96PC5 1412 aa39.12■■■■□ 3.85
COL15A1-203ENST00000471477 PPARGC1BQ86YN6 1023 aaKnown RBP39.11■■■■□ 3.85
COL15A1-203ENST00000471477 ARHGEF40Q8TER5 1519 aa39.09■■■■□ 3.85
COL15A1-203ENST00000471477 HECW2Q9P2P5 1572 aa39.08■■■■□ 3.85
COL15A1-203ENST00000471477 MAGI2Q86UL8 1455 aa39.07■■■■□ 3.85
COL15A1-203ENST00000471477 ZFYVE16Q7Z3T8 1539 aa39.07■■■■□ 3.85
COL15A1-203ENST00000471477 MBD5Q9P267 1494 aa39.05■■■■□ 3.84
COL15A1-203ENST00000471477 YEATS2Q9ULM3 1422 aa39.04■■■■□ 3.84
COL15A1-203ENST00000471477 PTPN23Q9H3S7 1636 aa39.03■■■■□ 3.84
COL15A1-203ENST00000471477 FGD6Q6ZV73 1430 aa39.03■■■■□ 3.84
COL15A1-203ENST00000471477 MLH3Q9UHC1 1453 aa38.99■■■■□ 3.83
COL15A1-203ENST00000471477 KIDINS220Q9ULH0 1771 aa38.97■■■■□ 3.83
COL15A1-203ENST00000471477 ARHGEF5Q12774 1597 aa38.97■■■■□ 3.83
COL15A1-203ENST00000471477 MYT1LQ9UL68 1186 aa38.96■■■■□ 3.83
COL15A1-203ENST00000471477 CCDC141Q6ZP82 1450 aa38.95■■■■□ 3.83
COL15A1-203ENST00000471477 ABCA6Q8N139 1617 aa38.93■■■■□ 3.82
COL15A1-203ENST00000471477 TCOF1Q13428 1488 aaKnown RBP38.93■■■■□ 3.82
COL15A1-203ENST00000471477 INO80Q9ULG1 1556 aaPredicted RBP38.92■■■■□ 3.82
COL15A1-203ENST00000471477 SPAG9O60271 1321 aaKnown RBP38.92■■■■□ 3.82
COL15A1-203ENST00000471477 DIP2CQ9Y2E4 1556 aa38.91■■■■□ 3.82
COL15A1-203ENST00000471477 ATP7AQ04656 1500 aa38.9■■■■□ 3.82
COL15A1-203ENST00000471477 RSPH4AQ5TD94 716 aa38.87■■■■□ 3.81
COL15A1-203ENST00000471477 ATP10AO60312 1499 aa38.86■■■■□ 3.81
COL15A1-203ENST00000471477 SIGLEC1Q9BZZ2 1709 aa38.85■■■■□ 3.81
COL15A1-203ENST00000471477 C9orf84Q5VXU9 1444 aa38.83■■■■□ 3.81
COL15A1-203ENST00000471477 CROCC2H7BZ55 1655 aa38.8■■■■□ 3.8
COL15A1-203ENST00000471477 DNMT1P26358 1616 aaKnown RBP38.79■■■■□ 3.8
COL15A1-203ENST00000471477 RTEL1-TNFRSF6BF6WH68 1400 aa38.79■■■■□ 3.8
COL15A1-203ENST00000471477 KDM4FA0A1W2PPD8 638 aa38.78■■■■□ 3.8
COL15A1-203ENST00000471477 REREQ9P2R6 1566 aa38.77■■■■□ 3.8
COL15A1-203ENST00000471477 FAM50AQ14320 339 aaKnown RBP38.76■■■■□ 3.8
COL15A1-203ENST00000471477 MAST1Q9Y2H9 1570 aa38.76■■■■□ 3.8
COL15A1-203ENST00000471477 ARID4BQ4LE39 1312 aaPredicted RBP38.74■■■■□ 3.79
COL15A1-203ENST00000471477 TSPY4P0CV99 314 aa38.74■■■■□ 3.79
COL15A1-203ENST00000471477 TSPY10P0CW01 314 aa38.74■■■■□ 3.79
COL15A1-203ENST00000471477 AEBP2Q6ZN18 517 aaPredicted RBP38.74■■■■□ 3.79
COL15A1-203ENST00000471477 ABCC5O15440 1437 aa38.74■■■■□ 3.79
COL15A1-203ENST00000471477 ADGBQ8N7X0 1667 aa38.73■■■■□ 3.79
COL15A1-203ENST00000471477 DAPK1P53355 1430 aa38.73■■■■□ 3.79
COL15A1-203ENST00000471477 BCORL1Q5H9F3 1711 aa38.7■■■■□ 3.79
COL15A1-203ENST00000471477 SHANK2Q9UPX8 1470 aa38.69■■■■□ 3.78
COL15A1-203ENST00000471477 A2MP01023 1474 aa38.65■■■■□ 3.78
COL15A1-203ENST00000471477 PLXNC1O60486 1568 aa38.64■■■■□ 3.78
COL15A1-203ENST00000471477 RRBP1Q9P2E9 1410 aaKnown RBP38.63■■■■□ 3.78
COL15A1-203ENST00000471477 AGLP35573 1532 aa38.62■■■■□ 3.77
COL15A1-203ENST00000471477 ADAMTSL3P82987 1691 aa38.61■■■■□ 3.77
COL15A1-203ENST00000471477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.58■■■■□ 3.77
COL15A1-203ENST00000471477 MLECQ14165 292 aa38.55■■■■□ 3.76
COL15A1-203ENST00000471477 MADDQ8WXG6 1647 aa38.53■■■■□ 3.76
COL15A1-203ENST00000471477 DHX29Q7Z478 1369 aaKnown RBP38.53■■■■□ 3.76
COL15A1-203ENST00000471477 CHIC2Q9UKJ5 165 aa38.53■■■■□ 3.76
COL15A1-203ENST00000471477 FER1L4A9Z1Z3 1794 aa38.49■■■■□ 3.75
COL15A1-203ENST00000471477 PTPRKQ15262 1439 aa38.48■■■■□ 3.75
COL15A1-203ENST00000471477 ADGRL2O95490 1459 aa38.47■■■■□ 3.75
COL15A1-203ENST00000471477 KIF15Q9NS87 1388 aa38.46■■■■□ 3.75
COL15A1-203ENST00000471477 ANKRD30AQ9BXX3 1397 aa38.46■■■■□ 3.75
COL15A1-203ENST00000471477 DUOX2Q9NRD8 1548 aa38.45■■■■□ 3.75
COL15A1-203ENST00000471477 RIMS1Q86UR5 1692 aaKnown RBP38.45■■■■□ 3.75
COL15A1-203ENST00000471477 ITGAEP38570 1179 aa38.44■■■■□ 3.74
COL15A1-203ENST00000471477 RRP7BPQ9NSQ0 103 aa38.43■■■■□ 3.74
COL15A1-203ENST00000471477 NCOA1Q15788 1441 aa38.43■■■■□ 3.74
COL15A1-203ENST00000471477 EIF2AK4Q9P2K8 1649 aaKnown RBP38.39■■■■□ 3.74
COL15A1-203ENST00000471477 KIF3BO15066 747 aa38.36■■■■□ 3.73
COL15A1-203ENST00000471477 GGT6Q6P531 493 aa38.33■■■■□ 3.73
COL15A1-203ENST00000471477 ERBINQ96RT1 1412 aa38.33■■■■□ 3.73
COL15A1-203ENST00000471477 PTPRMP28827 1452 aa38.32■■■■□ 3.73
COL15A1-203ENST00000471477 ROCK1Q13464 1354 aa38.31■■■■□ 3.72
COL15A1-203ENST00000471477 RNF17Q9BXT8 1623 aaKnown RBP38.3■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms