RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
SEMA3A-206ENST00000471474 SLAIN1Q8ND83 568 aa12.41□□□□□ -0.42
SEMA3A-206ENST00000471474 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
SEMA3A-206ENST00000471474 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
SEMA3A-206ENST00000471474 VSIG10Q8N0Z9 540 aa12.36□□□□□ -0.43
SEMA3A-206ENST00000471474 DDX27Q96GQ7 796 aaKnown RBP12.35□□□□□ -0.43
SEMA3A-206ENST00000471474 CADPS2Q86UW7 1296 aa12.34□□□□□ -0.43
SEMA3A-206ENST00000471474 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
SEMA3A-206ENST00000471474 C2orf72A6NCS6 295 aa12.32□□□□□ -0.44
SEMA3A-206ENST00000471474 POTEJP0CG39 1038 aa12.31□□□□□ -0.44
SEMA3A-206ENST00000471474 SNPHO15079 494 aa12.28□□□□□ -0.44
SEMA3A-206ENST00000471474 PPP1R15BQ5SWA1 713 aa12.28□□□□□ -0.44
SEMA3A-206ENST00000471474 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
SEMA3A-206ENST00000471474 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.45
SEMA3A-206ENST00000471474 PLPP6Q8IY26 295 aa12.26□□□□□ -0.45
SEMA3A-206ENST00000471474 OTUD5Q96G74 571 aa12.26□□□□□ -0.45
SEMA3A-206ENST00000471474 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
SEMA3A-206ENST00000471474 FOXK1P85037 733 aa12.25□□□□□ -0.45
SEMA3A-206ENST00000471474 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
SEMA3A-206ENST00000471474 DSG2Q14126 1118 aa12.24□□□□□ -0.45
SEMA3A-206ENST00000471474 DOK7Q18PE1 504 aa12.23□□□□□ -0.45
SEMA3A-206ENST00000471474 TMEM92Q6UXU6 159 aa12.23□□□□□ -0.45
SEMA3A-206ENST00000471474 KIF3CO14782 793 aa12.21□□□□□ -0.45
SEMA3A-206ENST00000471474 TBC1D12O60347 775 aa12.21□□□□□ -0.45
SEMA3A-206ENST00000471474 E2F4Q16254 413 aa12.21□□□□□ -0.45
SEMA3A-206ENST00000471474 P3H3Q8IVL6 736 aa12.21□□□□□ -0.45
SEMA3A-206ENST00000471474 MFSD10Q14728 455 aa12.19□□□□□ -0.46
SEMA3A-206ENST00000471474 KDM2AQ9Y2K7 1162 aa12.17□□□□□ -0.46
SEMA3A-206ENST00000471474 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
SEMA3A-206ENST00000471474 MAP3K9P80192 1104 aa12.15□□□□□ -0.46
SEMA3A-206ENST00000471474 UPF1Q92900 1129 aaKnown RBP eCLIP12.14□□□□□ -0.47
SEMA3A-206ENST00000471474 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
SEMA3A-206ENST00000471474 ZSWIM6Q9HCJ5 1215 aa12.07□□□□□ -0.48
SEMA3A-206ENST00000471474 SLC34A2O95436 690 aa12.05□□□□□ -0.48
SEMA3A-206ENST00000471474 NBR1Q14596 966 aa12.05□□□□□ -0.48
SEMA3A-206ENST00000471474 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
SEMA3A-206ENST00000471474 CAMK2BQ13554 666 aa12.04□□□□□ -0.48
SEMA3A-206ENST00000471474 PCDHGA4Q9Y5G9 962 aa12.04□□□□□ -0.48
SEMA3A-206ENST00000471474 DPYSL4O14531 572 aa12.03□□□□□ -0.48
SEMA3A-206ENST00000471474 KCNV2Q8TDN2 545 aa12.03□□□□□ -0.48
SEMA3A-206ENST00000471474 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
SEMA3A-206ENST00000471474 HOXB3P14651 431 aaPredicted RBP12.02□□□□□ -0.49
SEMA3A-206ENST00000471474 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
SEMA3A-206ENST00000471474 OXER1Q8TDS5 423 aa12.01□□□□□ -0.49
SEMA3A-206ENST00000471474 EMILIN3Q9NT22 766 aa12□□□□□ -0.49
SEMA3A-206ENST00000471474 TULP1O00294 542 aaPredicted RBP11.99□□□□□ -0.49
SEMA3A-206ENST00000471474 EVI5O60447 810 aa11.99□□□□□ -0.49
SEMA3A-206ENST00000471474 SPDYE16A6NNV3 312 aaPredicted RBP11.98□□□□□ -0.49
SEMA3A-206ENST00000471474 NUDT7P0C024 238 aa11.97□□□□□ -0.49
SEMA3A-206ENST00000471474 ST18O60284 1047 aa11.95□□□□□ -0.5
SEMA3A-206ENST00000471474 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
SEMA3A-206ENST00000471474 EMP3P54852 163 aa11.94□□□□□ -0.5
SEMA3A-206ENST00000471474 ERBB3P21860 1342 aa11.93□□□□□ -0.5
SEMA3A-206ENST00000471474 KHSRPQ92945 711 aaKnown RBP eCLIP11.93□□□□□ -0.5
SEMA3A-206ENST00000471474 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
SEMA3A-206ENST00000471474 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
SEMA3A-206ENST00000471474 BCANQ96GW7 911 aa11.92□□□□□ -0.5
SEMA3A-206ENST00000471474 ARIH1Q9Y4X5 557 aaPredicted RBP11.92□□□□□ -0.5
SEMA3A-206ENST00000471474 PSDA5PKW4 1024 aaPredicted RBP11.89□□□□□ -0.51
SEMA3A-206ENST00000471474 GRXCR2A6NFK2 248 aa11.89□□□□□ -0.51
SEMA3A-206ENST00000471474 PDIA6Q15084 440 aa11.89□□□□□ -0.51
SEMA3A-206ENST00000471474 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
SEMA3A-206ENST00000471474 DDX12PQ92771 950 aa11.86□□□□□ -0.51
SEMA3A-206ENST00000471474 KCNH8Q96L42 1107 aa11.86□□□□□ -0.51
SEMA3A-206ENST00000471474 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
SEMA3A-206ENST00000471474 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
SEMA3A-206ENST00000471474 ZNF454Q8N9F8 522 aa11.85□□□□□ -0.51
SEMA3A-206ENST00000471474 LHX6Q9UPM6 363 aa11.85□□□□□ -0.51
SEMA3A-206ENST00000471474 SEMA3EO15041 775 aa11.84□□□□□ -0.51
SEMA3A-206ENST00000471474 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
SEMA3A-206ENST00000471474 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
SEMA3A-206ENST00000471474 EPAS1Q99814 870 aa11.8□□□□□ -0.52
SEMA3A-206ENST00000471474 PHF14O94880 888 aa11.79□□□□□ -0.52
SEMA3A-206ENST00000471474 JPH4Q96JJ6 628 aa11.79□□□□□ -0.52
SEMA3A-206ENST00000471474 PTGER2P43116 358 aa11.78□□□□□ -0.52
SEMA3A-206ENST00000471474 TYW1BQ6NUM6 668 aa11.78□□□□□ -0.52
SEMA3A-206ENST00000471474 FBXW7Q969H0 707 aa11.78□□□□□ -0.52
SEMA3A-206ENST00000471474 ZDHHC16Q969W1 377 aa11.77□□□□□ -0.53
SEMA3A-206ENST00000471474 RBM33Q96EV2 1170 aaKnown RBP11.76□□□□□ -0.53
SEMA3A-206ENST00000471474 MAP3K7O43318 606 aa11.75□□□□□ -0.53
SEMA3A-206ENST00000471474 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
SEMA3A-206ENST00000471474 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
SEMA3A-206ENST00000471474 FOSBP53539 338 aa11.74□□□□□ -0.53
SEMA3A-206ENST00000471474 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
SEMA3A-206ENST00000471474 PLSCR2Q9NRY7 297 aa11.74□□□□□ -0.53
SEMA3A-206ENST00000471474 PCDHGA10Q9Y5H3 936 aa11.73□□□□□ -0.53
SEMA3A-206ENST00000471474 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
SEMA3A-206ENST00000471474 NUTM2FA1L443 756 aa11.71□□□□□ -0.53
SEMA3A-206ENST00000471474 PTPREP23469 700 aa11.71□□□□□ -0.53
SEMA3A-206ENST00000471474 POTEMA6NI47 508 aa11.7□□□□□ -0.54
SEMA3A-206ENST00000471474 POTEGQ6S5H5 508 aa11.7□□□□□ -0.54
SEMA3A-206ENST00000471474 EN1Q05925 392 aaPredicted RBP11.67□□□□□ -0.54
SEMA3A-206ENST00000471474 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
SEMA3A-206ENST00000471474 KCNK17Q96T54 332 aa11.67□□□□□ -0.54
SEMA3A-206ENST00000471474 OSBPP22059 807 aa11.66□□□□□ -0.54
SEMA3A-206ENST00000471474 LCE2DQ5TA82 110 aaPredicted RBP11.66□□□□□ -0.54
SEMA3A-206ENST00000471474 PBX2P40425 430 aa11.65□□□□□ -0.54
SEMA3A-206ENST00000471474 ADAM33Q9BZ11 813 aa11.65□□□□□ -0.54
SEMA3A-206ENST00000471474 BCL2L12Q9HB09 334 aa11.65□□□□□ -0.54
SEMA3A-206ENST00000471474 ARHGAP33O14559 1287 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms