RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 EFCAB2Q5VUJ9 269 aa26.57■■□□□ 1.84
HSPG2-208ENST00000471322 LRRC9Q6ZRR7 1453 aa26.56■■□□□ 1.84
HSPG2-208ENST00000471322 ARAP3Q8WWN8 1544 aa26.55■■□□□ 1.84
HSPG2-208ENST00000471322 PHLDB1Q86UU1 1377 aa26.55■■□□□ 1.84
HSPG2-208ENST00000471322 ZNF777Q9ULD5 760 aaPredicted RBP26.54■■□□□ 1.84
HSPG2-208ENST00000471322 CCNB3Q8WWL7 1395 aa26.53■■□□□ 1.84
HSPG2-208ENST00000471322 CDC42BPBQ9Y5S2 1711 aa26.53■■□□□ 1.84
HSPG2-208ENST00000471322 CFAP74Q9C0B2 1584 aa26.52■■□□□ 1.84
HSPG2-208ENST00000471322 GPATCH8Q9UKJ3 1502 aaKnown RBP26.52■■□□□ 1.84
HSPG2-208ENST00000471322 CDC42BPAQ5VT25 1732 aa26.52■■□□□ 1.84
HSPG2-208ENST00000471322 PREX2Q70Z35 1606 aa26.51■■□□□ 1.84
HSPG2-208ENST00000471322 ADGRL1O94910 1474 aa26.51■■□□□ 1.83
HSPG2-208ENST00000471322 SCAPERQ9BY12 1400 aa26.49■■□□□ 1.83
HSPG2-208ENST00000471322 NCOA2Q15596 1464 aa26.49■■□□□ 1.83
HSPG2-208ENST00000471322 DENND4BO75064 1496 aaPredicted RBP26.48■■□□□ 1.83
HSPG2-208ENST00000471322 CFDP1Q9UEE9 299 aaPredicted RBP26.48■■□□□ 1.83
HSPG2-208ENST00000471322 SUPT6HQ7KZ85 1726 aaKnown RBP26.47■■□□□ 1.83
HSPG2-208ENST00000471322 FRMPD1Q5SYB0 1578 aa26.45■■□□□ 1.82
HSPG2-208ENST00000471322 ZNF644Q9H582 1327 aaPredicted RBP26.42■■□□□ 1.82
HSPG2-208ENST00000471322 AFAP1Q8N556 730 aa26.41■■□□□ 1.82
HSPG2-208ENST00000471322 RICTORQ6R327 1708 aa26.4■■□□□ 1.82
HSPG2-208ENST00000471322 ARHGEF12Q9NZN5 1544 aa26.39■■□□□ 1.82
HSPG2-208ENST00000471322 POGZQ7Z3K3 1410 aa26.39■■□□□ 1.82
HSPG2-208ENST00000471322 SAMD9LQ8IVG5 1584 aa26.38■■□□□ 1.81
HSPG2-208ENST00000471322 HNRNPMP52272 730 aaKnown RBP eCLIP26.38■■□□□ 1.81
HSPG2-208ENST00000471322 ABCC1P33527 1531 aa26.36■■□□□ 1.81
HSPG2-208ENST00000471322 TRAPPC8Q9Y2L5 1435 aa26.35■■□□□ 1.81
HSPG2-208ENST00000471322 ITSN2Q9NZM3 1697 aa26.35■■□□□ 1.81
HSPG2-208ENST00000471322 RRBP1Q9P2E9 1410 aaKnown RBP26.35■■□□□ 1.81
HSPG2-208ENST00000471322 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
HSPG2-208ENST00000471322 SYCP2Q9BX26 1530 aa26.34■■□□□ 1.81
HSPG2-208ENST00000471322 MYT1LQ9UL68 1186 aa26.33■■□□□ 1.81
HSPG2-208ENST00000471322 ZNF518AQ6AHZ1 1483 aa26.32■■□□□ 1.8
HSPG2-208ENST00000471322 YEATS2Q9ULM3 1422 aa26.3■■□□□ 1.8
HSPG2-208ENST00000471322 ZMYM4Q5VZL5 1548 aa26.27■■□□□ 1.8
HSPG2-208ENST00000471322 MYOM3Q5VTT5 1437 aa26.27■■□□□ 1.8
HSPG2-208ENST00000471322 CAMSAP2Q08AD1 1489 aa26.25■■□□□ 1.79
HSPG2-208ENST00000471322 KIAA1107Q9UPP5 1409 aa26.25■■□□□ 1.79
HSPG2-208ENST00000471322 PLEKHH2Q8IVE3 1493 aa26.25■■□□□ 1.79
HSPG2-208ENST00000471322 ZFYVE16Q7Z3T8 1539 aa26.25■■□□□ 1.79
HSPG2-208ENST00000471322 KDM5CP41229 1560 aa26.24■■□□□ 1.79
HSPG2-208ENST00000471322 ARHGEF40Q8TER5 1519 aa26.23■■□□□ 1.79
HSPG2-208ENST00000471322 ARID4BQ4LE39 1312 aaPredicted RBP26.21■■□□□ 1.79
HSPG2-208ENST00000471322 MAGI2Q86UL8 1455 aa26.21■■□□□ 1.79
HSPG2-208ENST00000471322 MBD5Q9P267 1494 aa26.2■■□□□ 1.78
HSPG2-208ENST00000471322 SPAG9O60271 1321 aaKnown RBP26.19■■□□□ 1.78
HSPG2-208ENST00000471322 HECW2Q9P2P5 1572 aa26.19■■□□□ 1.78
HSPG2-208ENST00000471322 KDM4FA0A1W2PPD8 638 aa26.18■■□□□ 1.78
HSPG2-208ENST00000471322 MIA2Q96PC5 1412 aa26.17■■□□□ 1.78
HSPG2-208ENST00000471322 MLH3Q9UHC1 1453 aa26.16■■□□□ 1.78
HSPG2-208ENST00000471322 CCER1Q8TC90 406 aaPredicted RBP26.15■■□□□ 1.78
HSPG2-208ENST00000471322 FGD6Q6ZV73 1430 aa26.15■■□□□ 1.78
HSPG2-208ENST00000471322 KIDINS220Q9ULH0 1771 aa26.13■■□□□ 1.77
HSPG2-208ENST00000471322 ATP10AO60312 1499 aa26.13■■□□□ 1.77
HSPG2-208ENST00000471322 ABCA6Q8N139 1617 aa26.12■■□□□ 1.77
HSPG2-208ENST00000471322 SIGLEC1Q9BZZ2 1709 aa26.12■■□□□ 1.77
HSPG2-208ENST00000471322 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.12■■□□□ 1.77
HSPG2-208ENST00000471322 PTPN23Q9H3S7 1636 aa26.11■■□□□ 1.77
HSPG2-208ENST00000471322 CCDC141Q6ZP82 1450 aa26.11■■□□□ 1.77
HSPG2-208ENST00000471322 DIP2CQ9Y2E4 1556 aa26.11■■□□□ 1.77
HSPG2-208ENST00000471322 MLECQ14165 292 aa26.1■■□□□ 1.77
HSPG2-208ENST00000471322 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
HSPG2-208ENST00000471322 FAM50AQ14320 339 aaKnown RBP26.09■■□□□ 1.77
HSPG2-208ENST00000471322 C9orf84Q5VXU9 1444 aa26.09■■□□□ 1.77
HSPG2-208ENST00000471322 TSPY4P0CV99 314 aa26.06■■□□□ 1.76
HSPG2-208ENST00000471322 TSPY10P0CW01 314 aa26.06■■□□□ 1.76
HSPG2-208ENST00000471322 INO80Q9ULG1 1556 aaPredicted RBP26.06■■□□□ 1.76
HSPG2-208ENST00000471322 RSPH4AQ5TD94 716 aa26.06■■□□□ 1.76
HSPG2-208ENST00000471322 AEBP2Q6ZN18 517 aaPredicted RBP26.06■■□□□ 1.76
HSPG2-208ENST00000471322 ARHGEF5Q12774 1597 aa26.05■■□□□ 1.76
HSPG2-208ENST00000471322 TCOF1Q13428 1488 aaKnown RBP26.02■■□□□ 1.76
HSPG2-208ENST00000471322 RTEL1-TNFRSF6BF6WH68 1400 aa25.99■■□□□ 1.75
HSPG2-208ENST00000471322 ABCC5O15440 1437 aa25.99■■□□□ 1.75
HSPG2-208ENST00000471322 BCORL1Q5H9F3 1711 aa25.99■■□□□ 1.75
HSPG2-208ENST00000471322 CHIC2Q9UKJ5 165 aa25.98■■□□□ 1.75
HSPG2-208ENST00000471322 A2MP01023 1474 aa25.96■■□□□ 1.75
HSPG2-208ENST00000471322 DAPK1P53355 1430 aa25.96■■□□□ 1.75
HSPG2-208ENST00000471322 ITGAEP38570 1179 aa25.96■■□□□ 1.75
HSPG2-208ENST00000471322 REREQ9P2R6 1566 aa25.94■■□□□ 1.74
HSPG2-208ENST00000471322 PLPPR3Q6T4P5 718 aa25.93■■□□□ 1.74
HSPG2-208ENST00000471322 DNMT1P26358 1616 aaKnown RBP25.93■■□□□ 1.74
HSPG2-208ENST00000471322 ADAMTSL3P82987 1691 aa25.93■■□□□ 1.74
HSPG2-208ENST00000471322 MADDQ8WXG6 1647 aa25.92■■□□□ 1.74
HSPG2-208ENST00000471322 ADGBQ8N7X0 1667 aa25.91■■□□□ 1.74
HSPG2-208ENST00000471322 RRP7BPQ9NSQ0 103 aa25.91■■□□□ 1.74
HSPG2-208ENST00000471322 CROCC2H7BZ55 1655 aa25.9■■□□□ 1.74
HSPG2-208ENST00000471322 PLXNC1O60486 1568 aa25.89■■□□□ 1.73
HSPG2-208ENST00000471322 MAST1Q9Y2H9 1570 aa25.89■■□□□ 1.73
HSPG2-208ENST00000471322 DHX29Q7Z478 1369 aaKnown RBP25.89■■□□□ 1.73
HSPG2-208ENST00000471322 AGLP35573 1532 aa25.89■■□□□ 1.73
HSPG2-208ENST00000471322 GGT6Q6P531 493 aa25.88■■□□□ 1.73
HSPG2-208ENST00000471322 SHANK2Q9UPX8 1470 aa25.86■■□□□ 1.73
HSPG2-208ENST00000471322 KIF3BO15066 747 aa25.85■■□□□ 1.73
HSPG2-208ENST00000471322 RIMS1Q86UR5 1692 aaKnown RBP25.85■■□□□ 1.73
HSPG2-208ENST00000471322 PTPRKQ15262 1439 aa25.84■■□□□ 1.73
HSPG2-208ENST00000471322 KIF15Q9NS87 1388 aa25.84■■□□□ 1.73
HSPG2-208ENST00000471322 SETD5Q9C0A6 1442 aa25.83■■□□□ 1.73
HSPG2-208ENST00000471322 PTPRMP28827 1452 aa25.83■■□□□ 1.73
HSPG2-208ENST00000471322 CLSPNQ9HAW4 1339 aa25.83■■□□□ 1.73
HSPG2-208ENST00000471322 FER1L4A9Z1Z3 1794 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms