RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 OTUD5Q96G74 571 aa10.23□□□□□ -0.77
BRCA2-202ENST00000470094 CADPS2Q86UW7 1296 aa10.22□□□□□ -0.77
BRCA2-202ENST00000470094 TMC2Q8TDI7 906 aa10.22□□□□□ -0.77
BRCA2-202ENST00000470094 SLAIN1Q8ND83 568 aa10.21□□□□□ -0.77
BRCA2-202ENST00000470094 PDE4AP27815 886 aa10.19□□□□□ -0.78
BRCA2-202ENST00000470094 TMEM92Q6UXU6 159 aa10.19□□□□□ -0.78
BRCA2-202ENST00000470094 C2orf72A6NCS6 295 aa10.18□□□□□ -0.78
BRCA2-202ENST00000470094 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
BRCA2-202ENST00000470094 NCKAP5LQ9HCH0 1330 aa10.17□□□□□ -0.78
BRCA2-202ENST00000470094 GPHNQ9NQX3 736 aaPredicted RBP10.17□□□□□ -0.78
BRCA2-202ENST00000470094 POTEMA6NI47 508 aa10.15□□□□□ -0.78
BRCA2-202ENST00000470094 KIF3CO14782 793 aa10.15□□□□□ -0.78
BRCA2-202ENST00000470094 LARP6Q9BRS8 491 aaKnown RBP10.15□□□□□ -0.78
BRCA2-202ENST00000470094 PCDH10Q9P2E7 1040 aa10.13□□□□□ -0.79
BRCA2-202ENST00000470094 FOXK1P85037 733 aa10.12□□□□□ -0.79
BRCA2-202ENST00000470094 DDX27Q96GQ7 796 aaKnown RBP10.12□□□□□ -0.79
BRCA2-202ENST00000470094 WDR70Q9NW82 654 aa10.12□□□□□ -0.79
BRCA2-202ENST00000470094 DSG2Q14126 1118 aa10.11□□□□□ -0.79
BRCA2-202ENST00000470094 MFSD10Q14728 455 aa10.11□□□□□ -0.79
BRCA2-202ENST00000470094 POTEGQ6S5H5 508 aa10.11□□□□□ -0.79
BRCA2-202ENST00000470094 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
BRCA2-202ENST00000470094 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
BRCA2-202ENST00000470094 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
BRCA2-202ENST00000470094 PLPP6Q8IY26 295 aa10.09□□□□□ -0.79
BRCA2-202ENST00000470094 SNPHO15079 494 aa10.07□□□□□ -0.8
BRCA2-202ENST00000470094 DOK7Q18PE1 504 aa10.04□□□□□ -0.8
BRCA2-202ENST00000470094 KDM2AQ9Y2K7 1162 aa10.04□□□□□ -0.8
BRCA2-202ENST00000470094 RIMBP2O15034 1052 aa10.01□□□□□ -0.81
BRCA2-202ENST00000470094 HOXB3P14651 431 aaPredicted RBP10.01□□□□□ -0.81
BRCA2-202ENST00000470094 E2F4Q16254 413 aa10□□□□□ -0.81
BRCA2-202ENST00000470094 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
BRCA2-202ENST00000470094 SLC34A2O95436 690 aa9.98□□□□□ -0.81
BRCA2-202ENST00000470094 CAMK2BQ13554 666 aa9.98□□□□□ -0.81
BRCA2-202ENST00000470094 UPF1Q92900 1129 aaKnown RBP eCLIP9.97□□□□□ -0.81
BRCA2-202ENST00000470094 P3H3Q8IVL6 736 aa9.96□□□□□ -0.82
BRCA2-202ENST00000470094 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.82
BRCA2-202ENST00000470094 EMILIN3Q9NT22 766 aa9.95□□□□□ -0.82
BRCA2-202ENST00000470094 TBC1D12O60347 775 aa9.94□□□□□ -0.82
BRCA2-202ENST00000470094 OXER1Q8TDS5 423 aa9.94□□□□□ -0.82
BRCA2-202ENST00000470094 PTCD2Q8WV60 388 aaKnown RBP9.94□□□□□ -0.82
BRCA2-202ENST00000470094 FAM163AQ96GL9 167 aaPredicted RBP9.94□□□□□ -0.82
BRCA2-202ENST00000470094 KCNV2Q8TDN2 545 aa9.93□□□□□ -0.82
BRCA2-202ENST00000470094 PCDHGA4Q9Y5G9 962 aa9.93□□□□□ -0.82
BRCA2-202ENST00000470094 MAP3K9P80192 1104 aa9.92□□□□□ -0.82
BRCA2-202ENST00000470094 ST18O60284 1047 aa9.91□□□□□ -0.82
BRCA2-202ENST00000470094 DPYSL4O14531 572 aa9.9□□□□□ -0.82
BRCA2-202ENST00000470094 ARSIQ5FYB1 569 aa9.9□□□□□ -0.82
BRCA2-202ENST00000470094 ZNF316A6NFI3 1004 aaPredicted RBP9.89□□□□□ -0.83
BRCA2-202ENST00000470094 HOXB1P14653 301 aaPredicted RBP9.89□□□□□ -0.83
BRCA2-202ENST00000470094 GPR153Q6NV75 609 aa9.89□□□□□ -0.83
BRCA2-202ENST00000470094 ARHGEF1Q92888 912 aaKnown RBP9.89□□□□□ -0.83
BRCA2-202ENST00000470094 ARIH1Q9Y4X5 557 aaPredicted RBP9.88□□□□□ -0.83
BRCA2-202ENST00000470094 KHSRPQ92945 711 aaKnown RBP eCLIP9.87□□□□□ -0.83
BRCA2-202ENST00000470094 NUDT7P0C024 238 aa9.86□□□□□ -0.83
BRCA2-202ENST00000470094 EVI5O60447 810 aa9.85□□□□□ -0.83
BRCA2-202ENST00000470094 LCE2DQ5TA82 110 aaPredicted RBP9.85□□□□□ -0.83
BRCA2-202ENST00000470094 SPDYE16A6NNV3 312 aaPredicted RBP9.83□□□□□ -0.84
BRCA2-202ENST00000470094 EMP3P54852 163 aa9.83□□□□□ -0.84
BRCA2-202ENST00000470094 PDIA6Q15084 440 aa9.82□□□□□ -0.84
BRCA2-202ENST00000470094 MARVELD3Q96A59 401 aa9.82□□□□□ -0.84
BRCA2-202ENST00000470094 KDM4FA0A1W2PPD8 638 aa9.81□□□□□ -0.84
BRCA2-202ENST00000470094 ANO8Q9HCE9 1232 aaPredicted RBP9.78□□□□□ -0.84
BRCA2-202ENST00000470094 LHX6Q9UPM6 363 aa9.78□□□□□ -0.84
BRCA2-202ENST00000470094 ERBB3P21860 1342 aa9.78□□□□□ -0.84
BRCA2-202ENST00000470094 NBR1Q14596 966 aa9.76□□□□□ -0.85
BRCA2-202ENST00000470094 PSDA5PKW4 1024 aaPredicted RBP9.75□□□□□ -0.85
BRCA2-202ENST00000470094 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
BRCA2-202ENST00000470094 PTGER2P43116 358 aa9.74□□□□□ -0.85
BRCA2-202ENST00000470094 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
BRCA2-202ENST00000470094 SEMA3EO15041 775 aa9.73□□□□□ -0.85
BRCA2-202ENST00000470094 ZNF454Q8N9F8 522 aa9.73□□□□□ -0.85
BRCA2-202ENST00000470094 DDX12PQ92771 950 aa9.73□□□□□ -0.85
BRCA2-202ENST00000470094 PPP4R3BQ5MIZ7 849 aa9.72□□□□□ -0.85
BRCA2-202ENST00000470094 CDAN1Q8IWY9 1227 aa9.72□□□□□ -0.85
BRCA2-202ENST00000470094 JPH4Q96JJ6 628 aa9.72□□□□□ -0.85
BRCA2-202ENST00000470094 GRXCR2A6NFK2 248 aa9.71□□□□□ -0.86
BRCA2-202ENST00000470094 PHF14O94880 888 aa9.71□□□□□ -0.86
BRCA2-202ENST00000470094 FOSBP53539 338 aa9.71□□□□□ -0.86
BRCA2-202ENST00000470094 HS3ST6Q96QI5 342 aa9.71□□□□□ -0.86
BRCA2-202ENST00000470094 MLLT3P42568 568 aaPredicted RBP9.69□□□□□ -0.86
BRCA2-202ENST00000470094 EPAS1Q99814 870 aa9.69□□□□□ -0.86
BRCA2-202ENST00000470094 PCDHGA10Q9Y5H3 936 aa9.69□□□□□ -0.86
BRCA2-202ENST00000470094 TESPA1A2RU30 521 aaPredicted RBP9.68□□□□□ -0.86
BRCA2-202ENST00000470094 SMYD5Q6GMV2 418 aa9.68□□□□□ -0.86
BRCA2-202ENST00000470094 TYW1BQ6NUM6 668 aa9.68□□□□□ -0.86
BRCA2-202ENST00000470094 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
BRCA2-202ENST00000470094 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
BRCA2-202ENST00000470094 TULP1O00294 542 aaPredicted RBP9.66□□□□□ -0.86
BRCA2-202ENST00000470094 BCANQ96GW7 911 aa9.66□□□□□ -0.86
BRCA2-202ENST00000470094 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
BRCA2-202ENST00000470094 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
BRCA2-202ENST00000470094 ZNF687Q8N1G0 1237 aa9.64□□□□□ -0.87
BRCA2-202ENST00000470094 OSBPP22059 807 aa9.63□□□□□ -0.87
BRCA2-202ENST00000470094 RBM33Q96EV2 1170 aaKnown RBP9.63□□□□□ -0.87
BRCA2-202ENST00000470094 KCNH8Q96L42 1107 aa9.63□□□□□ -0.87
BRCA2-202ENST00000470094 ADAM33Q9BZ11 813 aa9.63□□□□□ -0.87
BRCA2-202ENST00000470094 MAP3K7O43318 606 aa9.62□□□□□ -0.87
BRCA2-202ENST00000470094 EN1Q05925 392 aaPredicted RBP9.62□□□□□ -0.87
BRCA2-202ENST00000470094 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
BRCA2-202ENST00000470094 PBX2P40425 430 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms