RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 POLR1AO95602 1720 aaPredicted RBP14.28□□□□□ -0.12
SMC4-210ENST00000469762 EIF4G2P78344 907 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMC4-210ENST00000469762 ANKRD30BQ9BXX2 1392 aa14.26□□□□□ -0.13
SMC4-210ENST00000469762 WDR62O43379 1518 aa14.26□□□□□ -0.13
SMC4-210ENST00000469762 MIA2Q96PC5 1412 aa14.25□□□□□ -0.13
SMC4-210ENST00000469762 RPRD2Q5VT52 1461 aaKnown RBP14.25□□□□□ -0.13
SMC4-210ENST00000469762 PBRM1Q86U86 1689 aa14.24□□□□□ -0.13
SMC4-210ENST00000469762 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
SMC4-210ENST00000469762 IQGAP2Q13576 1575 aa14.22□□□□□ -0.13
SMC4-210ENST00000469762 ERICH6BQ5W0A0 696 aa14.22□□□□□ -0.13
SMC4-210ENST00000469762 PPP4R2Q9NY27 417 aa14.21□□□□□ -0.13
SMC4-210ENST00000469762 KIF7Q2M1P5 1343 aa14.21□□□□□ -0.13
SMC4-210ENST00000469762 CDK11AQ9UQ88 783 aaPredicted RBP14.21□□□□□ -0.13
SMC4-210ENST00000469762 ZBED9Q6R2W3 1325 aa14.21□□□□□ -0.14
SMC4-210ENST00000469762 DAPK1P53355 1430 aa14.21□□□□□ -0.14
SMC4-210ENST00000469762 DNMT1P26358 1616 aaKnown RBP14.2□□□□□ -0.14
SMC4-210ENST00000469762 ABCC5O15440 1437 aa14.2□□□□□ -0.14
SMC4-210ENST00000469762 FAM9BQ8IZU0 186 aa14.2□□□□□ -0.14
SMC4-210ENST00000469762 BCORL1Q5H9F3 1711 aa14.19□□□□□ -0.14
SMC4-210ENST00000469762 ADAMTS12P58397 1594 aa14.19□□□□□ -0.14
SMC4-210ENST00000469762 ROCK1Q13464 1354 aa14.19□□□□□ -0.14
SMC4-210ENST00000469762 ZNF644Q9H582 1327 aaPredicted RBP14.18□□□□□ -0.14
SMC4-210ENST00000469762 B4GALNT3Q6L9W6 998 aa14.18□□□□□ -0.14
SMC4-210ENST00000469762 DHX29Q7Z478 1369 aaKnown RBP14.18□□□□□ -0.14
SMC4-210ENST00000469762 MRS2Q9HD23 443 aa14.17□□□□□ -0.14
SMC4-210ENST00000469762 ARID3CA6NKF2 412 aa14.17□□□□□ -0.14
SMC4-210ENST00000469762 MBD5Q9P267 1494 aa14.16□□□□□ -0.14
SMC4-210ENST00000469762 PZPP20742 1482 aa14.16□□□□□ -0.14
SMC4-210ENST00000469762 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
SMC4-210ENST00000469762 NUP153P49790 1475 aaKnown RBP14.13□□□□□ -0.15
SMC4-210ENST00000469762 DISP1Q96F81 1524 aa14.12□□□□□ -0.15
SMC4-210ENST00000469762 RNF123Q5XPI4 1314 aa14.11□□□□□ -0.15
SMC4-210ENST00000469762 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
SMC4-210ENST00000469762 KIAA0556O60303 1618 aa14.1□□□□□ -0.15
SMC4-210ENST00000469762 KDM5CP41229 1560 aa14.09□□□□□ -0.15
SMC4-210ENST00000469762 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
SMC4-210ENST00000469762 RAPGEF6Q8TEU7 1601 aa14.07□□□□□ -0.16
SMC4-210ENST00000469762 KIF14Q15058 1648 aa14.06□□□□□ -0.16
SMC4-210ENST00000469762 CROCC2H7BZ55 1655 aa14.05□□□□□ -0.16
SMC4-210ENST00000469762 ADGBQ8N7X0 1667 aa14.05□□□□□ -0.16
SMC4-210ENST00000469762 CAMSAP2Q08AD1 1489 aa14.05□□□□□ -0.16
SMC4-210ENST00000469762 USP47Q96K76 1375 aa14.04□□□□□ -0.16
SMC4-210ENST00000469762 ZNF608Q9ULD9 1512 aaPredicted RBP14.04□□□□□ -0.16
SMC4-210ENST00000469762 PRG4Q92954 1404 aaPredicted RBP14.04□□□□□ -0.16
SMC4-210ENST00000469762 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
SMC4-210ENST00000469762 KIAA1107Q9UPP5 1409 aa14.03□□□□□ -0.16
SMC4-210ENST00000469762 ADGRL2O95490 1459 aa14.02□□□□□ -0.16
SMC4-210ENST00000469762 SENP3-EIF4A1A0A087X0R7 540 aa14.02□□□□□ -0.17
SMC4-210ENST00000469762 NUDCQ9Y266 331 aa14.02□□□□□ -0.17
SMC4-210ENST00000469762 KIAA0586Q9BVV6 1533 aa14.02□□□□□ -0.17
SMC4-210ENST00000469762 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.17
SMC4-210ENST00000469762 PNISRQ8TF01 805 aaKnown RBP14.01□□□□□ -0.17
SMC4-210ENST00000469762 UHRF1BP1Q6BDS2 1440 aa14□□□□□ -0.17
SMC4-210ENST00000469762 ADCY10Q96PN6 1610 aa14□□□□□ -0.17
SMC4-210ENST00000469762 CNGB1Q14028 1251 aaPredicted RBP13.99□□□□□ -0.17
SMC4-210ENST00000469762 TROQ12816 1431 aaPredicted RBP13.99□□□□□ -0.17
SMC4-210ENST00000469762 ITSN2Q9NZM3 1697 aa13.98□□□□□ -0.17
SMC4-210ENST00000469762 E9PCH4 1651 aa13.98□□□□□ -0.17
SMC4-210ENST00000469762 ERICH6Q7L0X2 663 aa13.98□□□□□ -0.17
SMC4-210ENST00000469762 LRPPRCP42704 1394 aaKnown RBP13.98□□□□□ -0.17
SMC4-210ENST00000469762 RALGAPBQ86X10 1494 aa13.97□□□□□ -0.17
SMC4-210ENST00000469762 PKD2Q13563 968 aa13.97□□□□□ -0.17
SMC4-210ENST00000469762 PLB1Q6P1J6 1458 aa13.97□□□□□ -0.17
SMC4-210ENST00000469762 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.17
SMC4-210ENST00000469762 CDC42BPAQ5VT25 1732 aa13.96□□□□□ -0.17
SMC4-210ENST00000469762 ARID4BQ4LE39 1312 aaPredicted RBP13.95□□□□□ -0.18
SMC4-210ENST00000469762 NOP58Q9Y2X3 529 aaKnown RBP13.95□□□□□ -0.18
SMC4-210ENST00000469762 GRIN2AQ12879 1464 aa13.95□□□□□ -0.18
SMC4-210ENST00000469762 ZNF326Q5BKZ1 582 aaKnown RBP13.94□□□□□ -0.18
SMC4-210ENST00000469762 CFDP1Q9UEE9 299 aaPredicted RBP13.94□□□□□ -0.18
SMC4-210ENST00000469762 DEKP35659 375 aaKnown RBP13.93□□□□□ -0.18
SMC4-210ENST00000469762 POLR3GLQ9BT43 218 aa13.93□□□□□ -0.18
SMC4-210ENST00000469762 ANKRD50Q9ULJ7 1429 aa13.92□□□□□ -0.18
SMC4-210ENST00000469762 ARHGEF12Q9NZN5 1544 aa13.92□□□□□ -0.18
SMC4-210ENST00000469762 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
SMC4-210ENST00000469762 CCDC136Q96JN2 1154 aa13.91□□□□□ -0.18
SMC4-210ENST00000469762 IFT140Q96RY7 1462 aa13.91□□□□□ -0.18
SMC4-210ENST00000469762 KDM5DQ9BY66 1539 aa13.91□□□□□ -0.18
SMC4-210ENST00000469762 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
SMC4-210ENST00000469762 ST20-MTHFSA0A0A6YYL1 179 aa13.89□□□□□ -0.19
SMC4-210ENST00000469762 ROCK2O75116 1388 aaKnown RBP13.89□□□□□ -0.19
SMC4-210ENST00000469762 ANKRD30AQ9BXX3 1397 aa13.89□□□□□ -0.19
SMC4-210ENST00000469762 ZNF777Q9ULD5 760 aaPredicted RBP13.89□□□□□ -0.19
SMC4-210ENST00000469762 ABCC10Q5T3U5 1492 aa13.89□□□□□ -0.19
SMC4-210ENST00000469762 KIF15Q9NS87 1388 aa13.88□□□□□ -0.19
SMC4-210ENST00000469762 PTPRGP23470 1445 aa13.88□□□□□ -0.19
SMC4-210ENST00000469762 TMC1Q8TDI8 760 aa13.88□□□□□ -0.19
SMC4-210ENST00000469762 IPO9Q96P70 1041 aaKnown RBP13.88□□□□□ -0.19
SMC4-210ENST00000469762 NBR1Q14596 966 aa13.87□□□□□ -0.19
SMC4-210ENST00000469762 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
SMC4-210ENST00000469762 CARD11Q9BXL7 1154 aa13.87□□□□□ -0.19
SMC4-210ENST00000469762 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
SMC4-210ENST00000469762 SHANK2Q9UPX8 1470 aa13.87□□□□□ -0.19
SMC4-210ENST00000469762 NUP155O75694 1391 aa13.86□□□□□ -0.19
SMC4-210ENST00000469762 C9orf84Q5VXU9 1444 aa13.86□□□□□ -0.19
SMC4-210ENST00000469762 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
SMC4-210ENST00000469762 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
SMC4-210ENST00000469762 ABCA8O94911 1581 aa13.85□□□□□ -0.19
SMC4-210ENST00000469762 EXOC6Q8TAG9 804 aa13.85□□□□□ -0.19
SMC4-210ENST00000469762 RRP1P56182 461 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms