RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 CCER1Q8TC90 406 aaPredicted RBP23.93■■□□□ 1.42
C19orf54-202ENST00000469741 ARAP3Q8WWN8 1544 aa23.92■■□□□ 1.42
C19orf54-202ENST00000469741 NEO1Q92859 1461 aa23.92■■□□□ 1.42
C19orf54-202ENST00000469741 GPATCH8Q9UKJ3 1502 aaKnown RBP23.91■■□□□ 1.42
C19orf54-202ENST00000469741 LRRC9Q6ZRR7 1453 aa23.91■■□□□ 1.42
C19orf54-202ENST00000469741 FRMPD1Q5SYB0 1578 aa23.91■■□□□ 1.42
C19orf54-202ENST00000469741 ARHGAP5Q13017 1502 aa23.9■■□□□ 1.42
C19orf54-202ENST00000469741 EHBP1L1Q8N3D4 1523 aa23.88■■□□□ 1.41
C19orf54-202ENST00000469741 ZNF644Q9H582 1327 aaPredicted RBP23.88■■□□□ 1.41
C19orf54-202ENST00000469741 PREX2Q70Z35 1606 aa23.88■■□□□ 1.41
C19orf54-202ENST00000469741 EFCAB2Q5VUJ9 269 aa23.88■■□□□ 1.41
C19orf54-202ENST00000469741 ZNF777Q9ULD5 760 aaPredicted RBP23.88■■□□□ 1.41
C19orf54-202ENST00000469741 ARHGEF12Q9NZN5 1544 aa23.87■■□□□ 1.41
C19orf54-202ENST00000469741 NCOA2Q15596 1464 aa23.86■■□□□ 1.41
C19orf54-202ENST00000469741 SCAPERQ9BY12 1400 aa23.86■■□□□ 1.41
C19orf54-202ENST00000469741 ADGRL1O94910 1474 aa23.85■■□□□ 1.41
C19orf54-202ENST00000469741 AFAP1Q8N556 730 aa23.84■■□□□ 1.41
C19orf54-202ENST00000469741 RICTORQ6R327 1708 aa23.83■■□□□ 1.41
C19orf54-202ENST00000469741 CCNB3Q8WWL7 1395 aa23.83■■□□□ 1.41
C19orf54-202ENST00000469741 DENND4BO75064 1496 aaPredicted RBP23.81■■□□□ 1.4
C19orf54-202ENST00000469741 RRBP1Q9P2E9 1410 aaKnown RBP23.81■■□□□ 1.4
C19orf54-202ENST00000469741 PHLDB1Q86UU1 1377 aa23.81■■□□□ 1.4
C19orf54-202ENST00000469741 SAMD9LQ8IVG5 1584 aa23.8■■□□□ 1.4
C19orf54-202ENST00000469741 HNRNPMP52272 730 aaKnown RBP eCLIP23.8■■□□□ 1.4
C19orf54-202ENST00000469741 CFDP1Q9UEE9 299 aaPredicted RBP23.8■■□□□ 1.4
C19orf54-202ENST00000469741 SUPT6HQ7KZ85 1726 aaKnown RBP23.8■■□□□ 1.4
C19orf54-202ENST00000469741 TRAPPC8Q9Y2L5 1435 aa23.79■■□□□ 1.4
C19orf54-202ENST00000469741 CFAP74Q9C0B2 1584 aa23.78■■□□□ 1.4
C19orf54-202ENST00000469741 POGZQ7Z3K3 1410 aa23.75■■□□□ 1.39
C19orf54-202ENST00000469741 YEATS2Q9ULM3 1422 aa23.75■■□□□ 1.39
C19orf54-202ENST00000469741 ABCC1P33527 1531 aa23.75■■□□□ 1.39
C19orf54-202ENST00000469741 SYCP2Q9BX26 1530 aa23.72■■□□□ 1.39
C19orf54-202ENST00000469741 KDM4FA0A1W2PPD8 638 aa23.71■■□□□ 1.39
C19orf54-202ENST00000469741 SIGLEC1Q9BZZ2 1709 aa23.71■■□□□ 1.39
C19orf54-202ENST00000469741 ITSN2Q9NZM3 1697 aa23.7■■□□□ 1.38
C19orf54-202ENST00000469741 MBD5Q9P267 1494 aa23.65■■□□□ 1.38
C19orf54-202ENST00000469741 ZMYM4Q5VZL5 1548 aa23.65■■□□□ 1.38
C19orf54-202ENST00000469741 KDM5CP41229 1560 aa23.64■■□□□ 1.37
C19orf54-202ENST00000469741 CAMSAP2Q08AD1 1489 aa23.63■■□□□ 1.37
C19orf54-202ENST00000469741 ZNF518AQ6AHZ1 1483 aa23.63■■□□□ 1.37
C19orf54-202ENST00000469741 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
C19orf54-202ENST00000469741 MYT1LQ9UL68 1186 aa23.6■■□□□ 1.37
C19orf54-202ENST00000469741 ZFYVE16Q7Z3T8 1539 aa23.6■■□□□ 1.37
C19orf54-202ENST00000469741 ARHGEF40Q8TER5 1519 aa23.6■■□□□ 1.37
C19orf54-202ENST00000469741 KIDINS220Q9ULH0 1771 aa23.6■■□□□ 1.37
C19orf54-202ENST00000469741 KIAA1107Q9UPP5 1409 aa23.6■■□□□ 1.37
C19orf54-202ENST00000469741 ABCA6Q8N139 1617 aa23.57■■□□□ 1.36
C19orf54-202ENST00000469741 HECW2Q9P2P5 1572 aa23.56■■□□□ 1.36
C19orf54-202ENST00000469741 MLH3Q9UHC1 1453 aa23.55■■□□□ 1.36
C19orf54-202ENST00000469741 DIP2CQ9Y2E4 1556 aa23.54■■□□□ 1.36
C19orf54-202ENST00000469741 SPAG9O60271 1321 aaKnown RBP23.54■■□□□ 1.36
C19orf54-202ENST00000469741 ARID4BQ4LE39 1312 aaPredicted RBP23.54■■□□□ 1.36
C19orf54-202ENST00000469741 MAGI2Q86UL8 1455 aa23.53■■□□□ 1.36
C19orf54-202ENST00000469741 FGD6Q6ZV73 1430 aa23.53■■□□□ 1.36
C19orf54-202ENST00000469741 PLEKHH2Q8IVE3 1493 aa23.53■■□□□ 1.36
C19orf54-202ENST00000469741 MLECQ14165 292 aa23.52■■□□□ 1.36
C19orf54-202ENST00000469741 ATP10AO60312 1499 aa23.51■■□□□ 1.35
C19orf54-202ENST00000469741 PTPN23Q9H3S7 1636 aa23.51■■□□□ 1.35
C19orf54-202ENST00000469741 MIA2Q96PC5 1412 aa23.51■■□□□ 1.35
C19orf54-202ENST00000469741 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
C19orf54-202ENST00000469741 INO80Q9ULG1 1556 aaPredicted RBP23.48■■□□□ 1.35
C19orf54-202ENST00000469741 ATP7AQ04656 1500 aa23.48■■□□□ 1.35
C19orf54-202ENST00000469741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.47■■□□□ 1.35
C19orf54-202ENST00000469741 CCDC141Q6ZP82 1450 aa23.46■■□□□ 1.35
C19orf54-202ENST00000469741 C9orf84Q5VXU9 1444 aa23.45■■□□□ 1.34
C19orf54-202ENST00000469741 ABCC5O15440 1437 aa23.45■■□□□ 1.34
C19orf54-202ENST00000469741 FAM50AQ14320 339 aaKnown RBP23.45■■□□□ 1.34
C19orf54-202ENST00000469741 BCORL1Q5H9F3 1711 aa23.44■■□□□ 1.34
C19orf54-202ENST00000469741 ARHGEF5Q12774 1597 aa23.43■■□□□ 1.34
C19orf54-202ENST00000469741 TCOF1Q13428 1488 aaKnown RBP23.43■■□□□ 1.34
C19orf54-202ENST00000469741 DHX57Q6P158 1386 aaKnown RBP23.43■■□□□ 1.34
C19orf54-202ENST00000469741 CHIC2Q9UKJ5 165 aa23.42■■□□□ 1.34
C19orf54-202ENST00000469741 ADAMTSL3P82987 1691 aa23.42■■□□□ 1.34
C19orf54-202ENST00000469741 MADDQ8WXG6 1647 aa23.39■■□□□ 1.33
C19orf54-202ENST00000469741 PTPRKQ15262 1439 aa23.38■■□□□ 1.33
C19orf54-202ENST00000469741 PLPPR3Q6T4P5 718 aa23.38■■□□□ 1.33
C19orf54-202ENST00000469741 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
C19orf54-202ENST00000469741 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
C19orf54-202ENST00000469741 TSPY4P0CV99 314 aa23.37■■□□□ 1.33
C19orf54-202ENST00000469741 TSPY10P0CW01 314 aa23.37■■□□□ 1.33
C19orf54-202ENST00000469741 DAPK1P53355 1430 aa23.37■■□□□ 1.33
C19orf54-202ENST00000469741 RTEL1-TNFRSF6BF6WH68 1400 aa23.36■■□□□ 1.33
C19orf54-202ENST00000469741 RSPH4AQ5TD94 716 aa23.36■■□□□ 1.33
C19orf54-202ENST00000469741 A2MP01023 1474 aa23.36■■□□□ 1.33
C19orf54-202ENST00000469741 DNMT1P26358 1616 aaKnown RBP23.34■■□□□ 1.33
C19orf54-202ENST00000469741 ITGAEP38570 1179 aa23.34■■□□□ 1.33
C19orf54-202ENST00000469741 RRP7BPQ9NSQ0 103 aa23.34■■□□□ 1.33
C19orf54-202ENST00000469741 PLXNC1O60486 1568 aa23.34■■□□□ 1.33
C19orf54-202ENST00000469741 REREQ9P2R6 1566 aa23.34■■□□□ 1.33
C19orf54-202ENST00000469741 CROCC2H7BZ55 1655 aa23.33■■□□□ 1.32
C19orf54-202ENST00000469741 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
C19orf54-202ENST00000469741 CEBPAP49715 358 aaPredicted RBP23.32■■□□□ 1.32
C19orf54-202ENST00000469741 RIMS1Q86UR5 1692 aaKnown RBP23.31■■□□□ 1.32
C19orf54-202ENST00000469741 MAST1Q9Y2H9 1570 aa23.3■■□□□ 1.32
C19orf54-202ENST00000469741 DHX29Q7Z478 1369 aaKnown RBP23.3■■□□□ 1.32
C19orf54-202ENST00000469741 RAB3GAP2Q9H2M9 1393 aa23.3■■□□□ 1.32
C19orf54-202ENST00000469741 AGLP35573 1532 aa23.3■■□□□ 1.32
C19orf54-202ENST00000469741 GGT6Q6P531 493 aa23.29■■□□□ 1.32
C19orf54-202ENST00000469741 PTPRMP28827 1452 aa23.29■■□□□ 1.32
C19orf54-202ENST00000469741 KIF3BO15066 747 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms