RNA–Protein interactions for RNA: ENST00000469522.1

SNU13-207, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 2

Gene SNU13, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-207ENST00000469522 CDK11AQ9UQ88 783 aaPredicted RBP19.04■□□□□ 0.64
SNU13-207ENST00000469522 PREX2Q70Z35 1606 aa19.03■□□□□ 0.64
SNU13-207ENST00000469522 CEP162Q5TB80 1403 aa19.03■□□□□ 0.64
SNU13-207ENST00000469522 SCAPERQ9BY12 1400 aa19.03■□□□□ 0.64
SNU13-207ENST00000469522 YEATS2Q9ULM3 1422 aa19.03■□□□□ 0.64
SNU13-207ENST00000469522 BCORL1Q5H9F3 1711 aa19.03■□□□□ 0.64
SNU13-207ENST00000469522 CDC42BPAQ5VT25 1732 aa19.03■□□□□ 0.64
SNU13-207ENST00000469522 ARHGAP5Q13017 1502 aa19■□□□□ 0.63
SNU13-207ENST00000469522 ZFYVE16Q7Z3T8 1539 aa18.99■□□□□ 0.63
SNU13-207ENST00000469522 ARHGEF12Q9NZN5 1544 aa18.98■□□□□ 0.63
SNU13-207ENST00000469522 EFCAB2Q5VUJ9 269 aa18.97■□□□□ 0.63
SNU13-207ENST00000469522 KDM5CP41229 1560 aa18.97■□□□□ 0.63
SNU13-207ENST00000469522 MAGI2Q86UL8 1455 aa18.97■□□□□ 0.63
SNU13-207ENST00000469522 MADDQ8WXG6 1647 aa18.96■□□□□ 0.63
SNU13-207ENST00000469522 LOC105371045A0A1W2PR82 267 aa18.96■□□□□ 0.63
SNU13-207ENST00000469522 ABCC1P33527 1531 aa18.95■□□□□ 0.62
SNU13-207ENST00000469522 ITSN2Q9NZM3 1697 aa18.94■□□□□ 0.62
SNU13-207ENST00000469522 HECW2Q9P2P5 1572 aa18.93■□□□□ 0.62
SNU13-207ENST00000469522 PTPRMP28827 1452 aa18.92■□□□□ 0.62
SNU13-207ENST00000469522 GPATCH8Q9UKJ3 1502 aaKnown RBP18.92■□□□□ 0.62
SNU13-207ENST00000469522 ZNF518AQ6AHZ1 1483 aa18.91■□□□□ 0.62
SNU13-207ENST00000469522 SAMD9LQ8IVG5 1584 aa18.91■□□□□ 0.62
SNU13-207ENST00000469522 TRAPPC8Q9Y2L5 1435 aa18.91■□□□□ 0.62
SNU13-207ENST00000469522 AFAP1Q8N556 730 aa18.9■□□□□ 0.62
SNU13-207ENST00000469522 DIP2CQ9Y2E4 1556 aa18.89■□□□□ 0.61
SNU13-207ENST00000469522 ABCA6Q8N139 1617 aa18.89■□□□□ 0.61
SNU13-207ENST00000469522 RIMS1Q86UR5 1692 aaKnown RBP18.89■□□□□ 0.61
SNU13-207ENST00000469522 ATP10AO60312 1499 aa18.87■□□□□ 0.61
SNU13-207ENST00000469522 TIAM1Q13009 1591 aa18.86■□□□□ 0.61
SNU13-207ENST00000469522 ARID4BQ4LE39 1312 aaPredicted RBP18.86■□□□□ 0.61
SNU13-207ENST00000469522 KIDINS220Q9ULH0 1771 aa18.86■□□□□ 0.61
SNU13-207ENST00000469522 EHBP1L1Q8N3D4 1523 aa18.85■□□□□ 0.61
SNU13-207ENST00000469522 MLH3Q9UHC1 1453 aa18.85■□□□□ 0.61
SNU13-207ENST00000469522 SYCP2Q9BX26 1530 aa18.84■□□□□ 0.61
SNU13-207ENST00000469522 C9orf84Q5VXU9 1444 aa18.84■□□□□ 0.61
SNU13-207ENST00000469522 MTUS2Q5JR59 1369 aa18.83■□□□□ 0.61
SNU13-207ENST00000469522 FER1L4A9Z1Z3 1794 aa18.83■□□□□ 0.6
SNU13-207ENST00000469522 REREQ9P2R6 1566 aa18.82■□□□□ 0.6
SNU13-207ENST00000469522 VPS8Q8N3P4 1428 aa18.81■□□□□ 0.6
SNU13-207ENST00000469522 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
SNU13-207ENST00000469522 ZNF777Q9ULD5 760 aaPredicted RBP18.77■□□□□ 0.6
SNU13-207ENST00000469522 INO80Q9ULG1 1556 aaPredicted RBP18.76■□□□□ 0.59
SNU13-207ENST00000469522 KIAA1107Q9UPP5 1409 aa18.76■□□□□ 0.59
SNU13-207ENST00000469522 HNRNPMP52272 730 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNU13-207ENST00000469522 MLECQ14165 292 aa18.76■□□□□ 0.59
SNU13-207ENST00000469522 NCOA2Q15596 1464 aa18.76■□□□□ 0.59
SNU13-207ENST00000469522 ZNF644Q9H582 1327 aaPredicted RBP18.75■□□□□ 0.59
SNU13-207ENST00000469522 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
SNU13-207ENST00000469522 LMTK3Q96Q04 1460 aa18.75■□□□□ 0.59
SNU13-207ENST00000469522 AGLP35573 1532 aa18.74■□□□□ 0.59
SNU13-207ENST00000469522 CFDP1Q9UEE9 299 aaPredicted RBP18.74■□□□□ 0.59
SNU13-207ENST00000469522 MBD5Q9P267 1494 aa18.73■□□□□ 0.59
SNU13-207ENST00000469522 ATP7AQ04656 1500 aa18.72■□□□□ 0.59
SNU13-207ENST00000469522 LRRC9Q6ZRR7 1453 aa18.71■□□□□ 0.59
SNU13-207ENST00000469522 PLEKHH2Q8IVE3 1493 aa18.71■□□□□ 0.59
SNU13-207ENST00000469522 PLXNC1O60486 1568 aa18.7■□□□□ 0.58
SNU13-207ENST00000469522 MAP3K1Q13233 1512 aa18.69■□□□□ 0.58
SNU13-207ENST00000469522 KANK4Q5T7N3 995 aaPredicted RBP18.68■□□□□ 0.58
SNU13-207ENST00000469522 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
SNU13-207ENST00000469522 SPAG9O60271 1321 aaKnown RBP18.67■□□□□ 0.58
SNU13-207ENST00000469522 CAMSAP2Q08AD1 1489 aa18.66■□□□□ 0.58
SNU13-207ENST00000469522 C3P01024 1663 aa18.66■□□□□ 0.58
SNU13-207ENST00000469522 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
SNU13-207ENST00000469522 CEBPAP49715 358 aaPredicted RBP18.64■□□□□ 0.57
SNU13-207ENST00000469522 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
SNU13-207ENST00000469522 A2MP01023 1474 aa18.62■□□□□ 0.57
SNU13-207ENST00000469522 PREX1Q8TCU6 1659 aa18.61■□□□□ 0.57
SNU13-207ENST00000469522 ARHGEF5Q12774 1597 aa18.59■□□□□ 0.57
SNU13-207ENST00000469522 CCDC141Q6ZP82 1450 aa18.59■□□□□ 0.57
SNU13-207ENST00000469522 HSPA2P54652 639 aa18.59■□□□□ 0.57
SNU13-207ENST00000469522 RTEL1-TNFRSF6BF6WH68 1400 aa18.58■□□□□ 0.57
SNU13-207ENST00000469522 MROH2AA6NES4 1674 aa18.57■□□□□ 0.56
SNU13-207ENST00000469522 CLTCQ00610 1675 aaKnown RBP18.56■□□□□ 0.56
SNU13-207ENST00000469522 SETD1BQ9UPS6 1966 aaKnown RBP18.55■□□□□ 0.56
SNU13-207ENST00000469522 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
SNU13-207ENST00000469522 MAST1Q9Y2H9 1570 aa18.52■□□□□ 0.56
SNU13-207ENST00000469522 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
SNU13-207ENST00000469522 MIA2Q96PC5 1412 aa18.51■□□□□ 0.55
SNU13-207ENST00000469522 STRCQ7RTU9 1775 aa18.51■□□□□ 0.55
SNU13-207ENST00000469522 DHX29Q7Z478 1369 aaKnown RBP18.51■□□□□ 0.55
SNU13-207ENST00000469522 ZMYM3Q14202 1370 aa18.48■□□□□ 0.55
SNU13-207ENST00000469522 UHRF1BP1Q6BDS2 1440 aa18.47■□□□□ 0.55
SNU13-207ENST00000469522 PTPN23Q9H3S7 1636 aa18.46■□□□□ 0.55
SNU13-207ENST00000469522 RSPH4AQ5TD94 716 aa18.46■□□□□ 0.55
SNU13-207ENST00000469522 GGT6Q6P531 493 aa18.46■□□□□ 0.55
SNU13-207ENST00000469522 CROCC2H7BZ55 1655 aa18.46■□□□□ 0.55
SNU13-207ENST00000469522 ILDR1Q86SU0 546 aaPredicted RBP18.45■□□□□ 0.54
SNU13-207ENST00000469522 NPATQ14207 1427 aa18.45■□□□□ 0.54
SNU13-207ENST00000469522 PTPRKQ15262 1439 aa18.44■□□□□ 0.54
SNU13-207ENST00000469522 ESF1Q9H501 851 aaKnown RBP18.43■□□□□ 0.54
SNU13-207ENST00000469522 TCOF1Q13428 1488 aaKnown RBP18.43■□□□□ 0.54
SNU13-207ENST00000469522 MYO3AQ8NEV4 1616 aa18.42■□□□□ 0.54
SNU13-207ENST00000469522 RNF17Q9BXT8 1623 aaKnown RBP18.42■□□□□ 0.54
SNU13-207ENST00000469522 FGD6Q6ZV73 1430 aa18.42■□□□□ 0.54
SNU13-207ENST00000469522 MROH1Q8NDA8 1641 aa18.41■□□□□ 0.54
SNU13-207ENST00000469522 ABCC5O15440 1437 aa18.41■□□□□ 0.54
SNU13-207ENST00000469522 ZNF142P52746 1687 aaPredicted RBP18.41■□□□□ 0.54
SNU13-207ENST00000469522 DNMT1P26358 1616 aaKnown RBP18.41■□□□□ 0.54
SNU13-207ENST00000469522 KIF3BO15066 747 aa18.4■□□□□ 0.54
SNU13-207ENST00000469522 KDM5DQ9BY66 1539 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms