RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 ZFYVE16Q7Z3T8 1539 aa31.14■■■□□ 2.57
TRAK1-207ENST00000469506 SCAPERQ9BY12 1400 aa31.12■■■□□ 2.57
TRAK1-207ENST00000469506 POGZQ7Z3K3 1410 aa31.08■■■□□ 2.57
TRAK1-207ENST00000469506 MAGI2Q86UL8 1455 aa31.06■■■□□ 2.56
TRAK1-207ENST00000469506 TROQ12816 1431 aaPredicted RBP31.05■■■□□ 2.56
TRAK1-207ENST00000469506 LMTK3Q96Q04 1460 aa31.04■■■□□ 2.56
TRAK1-207ENST00000469506 PCF11O94913 1555 aaKnown RBP31.03■■■□□ 2.56
TRAK1-207ENST00000469506 EFCAB2Q5VUJ9 269 aa31.02■■■□□ 2.56
TRAK1-207ENST00000469506 CDK11AQ9UQ88 783 aaPredicted RBP31■■■□□ 2.55
TRAK1-207ENST00000469506 CDC42BPBQ9Y5S2 1711 aa30.99■■■□□ 2.55
TRAK1-207ENST00000469506 MLECQ14165 292 aa30.97■■■□□ 2.55
TRAK1-207ENST00000469506 FER1L4A9Z1Z3 1794 aa30.97■■■□□ 2.55
TRAK1-207ENST00000469506 ARHGAP5Q13017 1502 aa30.95■■■□□ 2.55
TRAK1-207ENST00000469506 PLPPR3Q6T4P5 718 aa30.95■■■□□ 2.55
TRAK1-207ENST00000469506 ATP10AO60312 1499 aa30.95■■■□□ 2.54
TRAK1-207ENST00000469506 CASKIN1Q8WXD9 1431 aa30.92■■■□□ 2.54
TRAK1-207ENST00000469506 AFAP1Q8N556 730 aa30.92■■■□□ 2.54
TRAK1-207ENST00000469506 KDM5CP41229 1560 aa30.91■■■□□ 2.54
TRAK1-207ENST00000469506 CLIP1P30622 1438 aa30.9■■■□□ 2.54
TRAK1-207ENST00000469506 C9orf84Q5VXU9 1444 aa30.89■■■□□ 2.53
TRAK1-207ENST00000469506 ARHGEF12Q9NZN5 1544 aa30.88■■■□□ 2.53
TRAK1-207ENST00000469506 HSPA2P54652 639 aa30.88■■■□□ 2.53
TRAK1-207ENST00000469506 ZNF518AQ6AHZ1 1483 aa30.87■■■□□ 2.53
TRAK1-207ENST00000469506 PREX2Q70Z35 1606 aa30.87■■■□□ 2.53
TRAK1-207ENST00000469506 CDC42BPAQ5VT25 1732 aa30.84■■■□□ 2.53
TRAK1-207ENST00000469506 CCDC18Q5T9S5 1454 aa30.83■■■□□ 2.53
TRAK1-207ENST00000469506 DIP2CQ9Y2E4 1556 aa30.83■■■□□ 2.53
TRAK1-207ENST00000469506 ABCA6Q8N139 1617 aa30.8■■■□□ 2.52
TRAK1-207ENST00000469506 TRAPPC8Q9Y2L5 1435 aa30.8■■■□□ 2.52
TRAK1-207ENST00000469506 ABCC1P33527 1531 aa30.79■■■□□ 2.52
TRAK1-207ENST00000469506 ITSN2Q9NZM3 1697 aa30.79■■■□□ 2.52
TRAK1-207ENST00000469506 CEBPAP49715 358 aaPredicted RBP30.77■■■□□ 2.52
TRAK1-207ENST00000469506 FYCO1Q9BQS8 1478 aa30.76■■■□□ 2.52
TRAK1-207ENST00000469506 FBXO41Q8TF61 875 aa30.76■■■□□ 2.51
TRAK1-207ENST00000469506 MLH3Q9UHC1 1453 aa30.75■■■□□ 2.51
TRAK1-207ENST00000469506 REREQ9P2R6 1566 aa30.73■■■□□ 2.51
TRAK1-207ENST00000469506 KIDINS220Q9ULH0 1771 aa30.72■■■□□ 2.51
TRAK1-207ENST00000469506 MYT1LQ9UL68 1186 aa30.71■■■□□ 2.51
TRAK1-207ENST00000469506 PREX1Q8TCU6 1659 aa30.7■■■□□ 2.5
TRAK1-207ENST00000469506 SAMD9LQ8IVG5 1584 aa30.66■■■□□ 2.5
TRAK1-207ENST00000469506 GPATCH8Q9UKJ3 1502 aaKnown RBP30.64■■■□□ 2.5
TRAK1-207ENST00000469506 AGLP35573 1532 aa30.63■■■□□ 2.49
TRAK1-207ENST00000469506 SETD1BQ9UPS6 1966 aaKnown RBP30.63■■■□□ 2.49
TRAK1-207ENST00000469506 C3P01024 1663 aa30.63■■■□□ 2.49
TRAK1-207ENST00000469506 STRCQ7RTU9 1775 aa30.6■■■□□ 2.49
TRAK1-207ENST00000469506 ZNF777Q9ULD5 760 aaPredicted RBP30.6■■■□□ 2.49
TRAK1-207ENST00000469506 SYCP2Q9BX26 1530 aa30.59■■■□□ 2.49
TRAK1-207ENST00000469506 HNRNPMP52272 730 aaKnown RBP eCLIP30.56■■■□□ 2.48
TRAK1-207ENST00000469506 SUPT6HQ7KZ85 1726 aaKnown RBP30.5■■■□□ 2.47
TRAK1-207ENST00000469506 UHRF1BP1Q6BDS2 1440 aa30.49■■■□□ 2.47
TRAK1-207ENST00000469506 CERKQ8TCT0 537 aa30.47■■■□□ 2.47
TRAK1-207ENST00000469506 CFDP1Q9UEE9 299 aaPredicted RBP30.47■■■□□ 2.47
TRAK1-207ENST00000469506 SPAG9O60271 1321 aaKnown RBP30.47■■■□□ 2.47
TRAK1-207ENST00000469506 INO80Q9ULG1 1556 aaPredicted RBP30.46■■■□□ 2.47
TRAK1-207ENST00000469506 KIAA1107Q9UPP5 1409 aa30.46■■■□□ 2.47
TRAK1-207ENST00000469506 CCNB3Q8WWL7 1395 aa30.45■■■□□ 2.47
TRAK1-207ENST00000469506 ATP7AQ04656 1500 aa30.45■■■□□ 2.47
TRAK1-207ENST00000469506 MTUS2Q5JR59 1369 aa30.44■■■□□ 2.46
TRAK1-207ENST00000469506 TIAM1Q13009 1591 aa30.44■■■□□ 2.46
TRAK1-207ENST00000469506 ZNF644Q9H582 1327 aaPredicted RBP30.43■■■□□ 2.46
TRAK1-207ENST00000469506 ESF1Q9H501 851 aaKnown RBP30.41■■■□□ 2.46
TRAK1-207ENST00000469506 PLEKHH2Q8IVE3 1493 aa30.4■■■□□ 2.46
TRAK1-207ENST00000469506 PLXNC1O60486 1568 aa30.4■■■□□ 2.46
TRAK1-207ENST00000469506 MROH2AA6NES4 1674 aa30.39■■■□□ 2.46
TRAK1-207ENST00000469506 CEP162Q5TB80 1403 aa30.39■■■□□ 2.45
TRAK1-207ENST00000469506 CNTLNQ9NXG0 1405 aa30.39■■■□□ 2.45
TRAK1-207ENST00000469506 A2MP01023 1474 aa30.36■■■□□ 2.45
TRAK1-207ENST00000469506 EHBP1L1Q8N3D4 1523 aa30.36■■■□□ 2.45
TRAK1-207ENST00000469506 CLTCQ00610 1675 aaKnown RBP30.36■■■□□ 2.45
TRAK1-207ENST00000469506 MBD5Q9P267 1494 aa30.35■■■□□ 2.45
TRAK1-207ENST00000469506 ZMYM3Q14202 1370 aa30.34■■■□□ 2.45
TRAK1-207ENST00000469506 DMRT2Q9Y5R5 561 aa30.31■■■□□ 2.44
TRAK1-207ENST00000469506 ADGBQ8N7X0 1667 aa30.3■■■□□ 2.44
TRAK1-207ENST00000469506 PTPRTO14522 1441 aa30.29■■■□□ 2.44
TRAK1-207ENST00000469506 NPATQ14207 1427 aa30.28■■■□□ 2.44
TRAK1-207ENST00000469506 NCOA1Q15788 1441 aa30.26■■■□□ 2.43
TRAK1-207ENST00000469506 GGT6Q6P531 493 aa30.25■■■□□ 2.43
TRAK1-207ENST00000469506 CAMSAP1Q5T5Y3 1602 aa30.23■■■□□ 2.43
TRAK1-207ENST00000469506 NCOA2Q15596 1464 aa30.22■■■□□ 2.43
TRAK1-207ENST00000469506 LTBP4Q8N2S1 1624 aa30.21■■■□□ 2.43
TRAK1-207ENST00000469506 PTPRKQ15262 1439 aa30.21■■■□□ 2.43
TRAK1-207ENST00000469506 MYO3AQ8NEV4 1616 aa30.2■■■□□ 2.43
TRAK1-207ENST00000469506 RTEL1-TNFRSF6BF6WH68 1400 aa30.19■■■□□ 2.42
TRAK1-207ENST00000469506 ZNF142P52746 1687 aaPredicted RBP30.18■■■□□ 2.42
TRAK1-207ENST00000469506 LOC105371045A0A1W2PR82 267 aa30.18■■■□□ 2.42
TRAK1-207ENST00000469506 CAMSAP2Q08AD1 1489 aa30.16■■■□□ 2.42
TRAK1-207ENST00000469506 NCKAP5LQ9HCH0 1330 aa30.15■■■□□ 2.42
TRAK1-207ENST00000469506 DHX29Q7Z478 1369 aaKnown RBP30.15■■■□□ 2.42
TRAK1-207ENST00000469506 CCDC141Q6ZP82 1450 aa30.12■■■□□ 2.41
TRAK1-207ENST00000469506 CEP170BQ9Y4F5 1589 aaPredicted RBP30.12■■■□□ 2.41
TRAK1-207ENST00000469506 PPP6R1Q9UPN7 881 aa30.1■■■□□ 2.41
TRAK1-207ENST00000469506 LRRC9Q6ZRR7 1453 aa30.06■■■□□ 2.4
TRAK1-207ENST00000469506 VPS8Q8N3P4 1428 aa30.05■■■□□ 2.4
TRAK1-207ENST00000469506 KIF3BO15066 747 aa30.05■■■□□ 2.4
TRAK1-207ENST00000469506 ARHGEF5Q12774 1597 aa30.05■■■□□ 2.4
TRAK1-207ENST00000469506 TCOF1Q13428 1488 aaKnown RBP30.04■■■□□ 2.4
TRAK1-207ENST00000469506 FBXO31Q5XUX0 539 aaPredicted RBP30.03■■■□□ 2.4
TRAK1-207ENST00000469506 PLA2R1Q13018 1463 aa30.03■■■□□ 2.4
TRAK1-207ENST00000469506 KANK4Q5T7N3 995 aaPredicted RBP30.02■■■□□ 2.4
TRAK1-207ENST00000469506 DNMT1P26358 1616 aaKnown RBP30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms