RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 BARGINQ6ZT62 677 aa15.16■□□□□ 0.02
ITGA4-205ENST00000468948 TRIM35Q9UPQ4 493 aa15.15■□□□□ 0.02
ITGA4-205ENST00000468948 RBM26Q5T8P6 1007 aaKnown RBP15.14■□□□□ 0.01
ITGA4-205ENST00000468948 DPY19L2Q6NUT2 758 aa15.12■□□□□ 0.01
ITGA4-205ENST00000468948 C14orf37Q86TY3 774 aa15.12■□□□□ 0.01
ITGA4-205ENST00000468948 GPIHBP1Q8IV16 184 aa15.11■□□□□ 0.01
ITGA4-205ENST00000468948 DPYSL4O14531 572 aa15.1■□□□□ 0.01
ITGA4-205ENST00000468948 DSG2Q14126 1118 aa15.1■□□□□ 0.01
ITGA4-205ENST00000468948 EMILIN3Q9NT22 766 aa15.09■□□□□ 0.01
ITGA4-205ENST00000468948 SPDYE16A6NNV3 312 aaPredicted RBP15.08■□□□□ 0
ITGA4-205ENST00000468948 GALR2O43603 387 aaPredicted RBP15.08■□□□□ 0
ITGA4-205ENST00000468948 MICALL2Q8IY33 904 aa15.08■□□□□ 0
ITGA4-205ENST00000468948 TMC2Q8TDI7 906 aa15.08■□□□□ 0
ITGA4-205ENST00000468948 KRI1Q8N9T8 703 aaKnown RBP15.06■□□□□ 0
ITGA4-205ENST00000468948 AK7Q96M32 723 aa15.06■□□□□ 0
ITGA4-205ENST00000468948 FOXK1P85037 733 aa15.03■□□□□ -0
ITGA4-205ENST00000468948 PDIA6Q15084 440 aa15.03■□□□□ -0
ITGA4-205ENST00000468948 PDCD7Q8N8D1 485 aaKnown RBP15.01□□□□□ -0.01
ITGA4-205ENST00000468948 PLPP6Q8IY26 295 aa14.98□□□□□ -0.01
ITGA4-205ENST00000468948 CLCN6P51797 869 aa14.97□□□□□ -0.01
ITGA4-205ENST00000468948 ATN1P54259 1190 aaPredicted RBP14.97□□□□□ -0.01
ITGA4-205ENST00000468948 G3V3G9 751 aa14.95□□□□□ -0.02
ITGA4-205ENST00000468948 OCEL1Q9H607 264 aa14.95□□□□□ -0.02
ITGA4-205ENST00000468948 BOLA1Q9Y3E2 137 aa14.95□□□□□ -0.02
ITGA4-205ENST00000468948 C2orf72A6NCS6 295 aa14.94□□□□□ -0.02
ITGA4-205ENST00000468948 IRX5P78411 483 aaPredicted RBP14.94□□□□□ -0.02
ITGA4-205ENST00000468948 TMEM121BQ9BXQ6 578 aaPredicted RBP14.94□□□□□ -0.02
ITGA4-205ENST00000468948 HAX1O00165 279 aa14.93□□□□□ -0.02
ITGA4-205ENST00000468948 GPBP1L1Q9HC44 474 aaPredicted RBP14.93□□□□□ -0.02
ITGA4-205ENST00000468948 MAP3K9P80192 1104 aa14.91□□□□□ -0.02
ITGA4-205ENST00000468948 ATMINO43313 823 aaPredicted RBP14.9□□□□□ -0.02
ITGA4-205ENST00000468948 IER5LQ5T953 404 aa14.9□□□□□ -0.02
ITGA4-205ENST00000468948 KIF3CO14782 793 aa14.89□□□□□ -0.03
ITGA4-205ENST00000468948 TRIM66O15016 1216 aa14.89□□□□□ -0.03
ITGA4-205ENST00000468948 DAXXQ9UER7 740 aaPredicted RBP14.89□□□□□ -0.03
ITGA4-205ENST00000468948 GRXCR2A6NFK2 248 aa14.87□□□□□ -0.03
ITGA4-205ENST00000468948 ASTLQ6HA08 431 aaPredicted RBP14.87□□□□□ -0.03
ITGA4-205ENST00000468948 EVX2Q03828 476 aa14.86□□□□□ -0.03
ITGA4-205ENST00000468948 PDE4DQ08499 809 aa14.86□□□□□ -0.03
ITGA4-205ENST00000468948 IL27Q8NEV9 243 aa14.86□□□□□ -0.03
ITGA4-205ENST00000468948 KDM4CQ9H3R0 1056 aa14.86□□□□□ -0.03
ITGA4-205ENST00000468948 GPR37O15354 613 aa14.84□□□□□ -0.03
ITGA4-205ENST00000468948 PLCG2P16885 1265 aa14.84□□□□□ -0.03
ITGA4-205ENST00000468948 L3MBTL3Q96JM7 780 aaPredicted RBP14.83□□□□□ -0.04
ITGA4-205ENST00000468948 NUTM2FA1L443 756 aa14.82□□□□□ -0.04
ITGA4-205ENST00000468948 UPF1Q92900 1129 aaKnown RBP eCLIP14.82□□□□□ -0.04
ITGA4-205ENST00000468948 ARXQ96QS3 562 aa14.82□□□□□ -0.04
ITGA4-205ENST00000468948 MINK1Q8N4C8 1332 aaPredicted RBP14.78□□□□□ -0.04
ITGA4-205ENST00000468948 OSBPP22059 807 aa14.76□□□□□ -0.05
ITGA4-205ENST00000468948 OXER1Q8TDS5 423 aa14.75□□□□□ -0.05
ITGA4-205ENST00000468948 TMEM92Q6UXU6 159 aa14.74□□□□□ -0.05
ITGA4-205ENST00000468948 TBC1D12O60347 775 aa14.73□□□□□ -0.05
ITGA4-205ENST00000468948 PTGER2P43116 358 aa14.73□□□□□ -0.05
ITGA4-205ENST00000468948 MAP2K5Q13163 448 aa14.73□□□□□ -0.05
ITGA4-205ENST00000468948 DDX12PQ92771 950 aa14.72□□□□□ -0.05
ITGA4-205ENST00000468948 IRF6O14896 467 aa14.71□□□□□ -0.05
ITGA4-205ENST00000468948 SEC24BO95487 1268 aa14.71□□□□□ -0.05
ITGA4-205ENST00000468948 CCDC102AQ96A19 550 aa14.71□□□□□ -0.05
ITGA4-205ENST00000468948 GNPATO15228 680 aa14.7□□□□□ -0.06
ITGA4-205ENST00000468948 FCHSD2O94868 740 aa14.7□□□□□ -0.06
ITGA4-205ENST00000468948 SUPT5HO00267 1087 aaKnown RBP14.69□□□□□ -0.06
ITGA4-205ENST00000468948 EVI5O60447 810 aa14.67□□□□□ -0.06
ITGA4-205ENST00000468948 HIC1Q14526 733 aa14.67□□□□□ -0.06
ITGA4-205ENST00000468948 FAM117AQ9C073 453 aa14.67□□□□□ -0.06
ITGA4-205ENST00000468948 COLQQ9Y215 455 aaPredicted RBP14.66□□□□□ -0.06
ITGA4-205ENST00000468948 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
ITGA4-205ENST00000468948 ZNF316A6NFI3 1004 aaPredicted RBP14.63□□□□□ -0.07
ITGA4-205ENST00000468948 GABBR2O75899 941 aa14.63□□□□□ -0.07
ITGA4-205ENST00000468948 FECHP22830 423 aa14.63□□□□□ -0.07
ITGA4-205ENST00000468948 AMHR2Q16671 573 aa14.63□□□□□ -0.07
ITGA4-205ENST00000468948 PRIM1P49642 420 aaKnown RBP14.61□□□□□ -0.07
ITGA4-205ENST00000468948 HOMEZQ8IX15 550 aa14.61□□□□□ -0.07
ITGA4-205ENST00000468948 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
ITGA4-205ENST00000468948 DDRGK1Q96HY6 314 aa14.6□□□□□ -0.07
ITGA4-205ENST00000468948 PARP9Q8IXQ6 854 aa14.59□□□□□ -0.07
ITGA4-205ENST00000468948 PTCD2Q8WV60 388 aaKnown RBP14.59□□□□□ -0.07
ITGA4-205ENST00000468948 PTGDRQ13258 359 aa14.58□□□□□ -0.08
ITGA4-205ENST00000468948 PLEKHG3A1L390 1219 aa14.57□□□□□ -0.08
ITGA4-205ENST00000468948 SLC39A7Q92504 469 aa14.57□□□□□ -0.08
ITGA4-205ENST00000468948 TTLL12Q14166 644 aaPredicted RBP14.54□□□□□ -0.08
ITGA4-205ENST00000468948 C3orf67Q6ZVT6 689 aa14.54□□□□□ -0.08
ITGA4-205ENST00000468948 ZMYND15Q9H091 742 aa14.53□□□□□ -0.08
ITGA4-205ENST00000468948 ANO8Q9HCE9 1232 aaPredicted RBP14.53□□□□□ -0.08
ITGA4-205ENST00000468948 POTEFA5A3E0 1075 aa14.52□□□□□ -0.09
ITGA4-205ENST00000468948 C7P10643 843 aa14.52□□□□□ -0.09
ITGA4-205ENST00000468948 SLC34A2O95436 690 aa14.51□□□□□ -0.09
ITGA4-205ENST00000468948 EPAS1Q99814 870 aa14.48□□□□□ -0.09
ITGA4-205ENST00000468948 PHF14O94880 888 aa14.47□□□□□ -0.09
ITGA4-205ENST00000468948 EN1Q05925 392 aaPredicted RBP14.47□□□□□ -0.09
ITGA4-205ENST00000468948 GIGYF2Q6Y7W6 1299 aaKnown RBP14.46□□□□□ -0.09
ITGA4-205ENST00000468948 CDHR5Q9HBB8 845 aa14.46□□□□□ -0.09
ITGA4-205ENST00000468948 METRNQ9UJH8 293 aa14.46□□□□□ -0.09
ITGA4-205ENST00000468948 MAP3K7O43318 606 aa14.45□□□□□ -0.1
ITGA4-205ENST00000468948 RBM33Q96EV2 1170 aaKnown RBP14.44□□□□□ -0.1
ITGA4-205ENST00000468948 NPDC1Q9NQX5 325 aaPredicted RBP14.44□□□□□ -0.1
ITGA4-205ENST00000468948 RSPH6AQ9H0K4 717 aa14.43□□□□□ -0.1
ITGA4-205ENST00000468948 GOPCQ9HD26 462 aa14.42□□□□□ -0.1
ITGA4-205ENST00000468948 MS4A1P11836 297 aa14.41□□□□□ -0.1
ITGA4-205ENST00000468948 REPIN1Q9BWE0 567 aaKnown RBP14.41□□□□□ -0.1
ITGA4-205ENST00000468948 PCDHGA10Q9Y5H3 936 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms