RNA–Protein interactions for RNA: ENST00000468753.5

COL4A3-203, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 660 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-203ENST00000468753 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
COL4A3-203ENST00000468753 CLIP1P30622 1438 aa13.89□□□□□ -0.19
COL4A3-203ENST00000468753 PLEKHD1A6NEE1 506 aa13.88□□□□□ -0.19
COL4A3-203ENST00000468753 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
COL4A3-203ENST00000468753 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
COL4A3-203ENST00000468753 PCF11O94913 1555 aaKnown RBP13.86□□□□□ -0.19
COL4A3-203ENST00000468753 LRRIQ1Q96JM4 1722 aa13.85□□□□□ -0.19
COL4A3-203ENST00000468753 CASKIN1Q8WXD9 1431 aa13.85□□□□□ -0.19
COL4A3-203ENST00000468753 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL4A3-203ENST00000468753 ATP1B4Q9UN42 357 aaPredicted RBP13.83□□□□□ -0.2
COL4A3-203ENST00000468753 ARAP3Q8WWN8 1544 aa13.83□□□□□ -0.2
COL4A3-203ENST00000468753 TTC37Q6PGP7 1564 aa13.83□□□□□ -0.2
COL4A3-203ENST00000468753 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.2
COL4A3-203ENST00000468753 NEO1Q92859 1461 aa13.82□□□□□ -0.2
COL4A3-203ENST00000468753 FYCO1Q9BQS8 1478 aa13.81□□□□□ -0.2
COL4A3-203ENST00000468753 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
COL4A3-203ENST00000468753 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
COL4A3-203ENST00000468753 TROQ12816 1431 aaPredicted RBP13.8□□□□□ -0.2
COL4A3-203ENST00000468753 CDK11AQ9UQ88 783 aaPredicted RBP13.79□□□□□ -0.2
COL4A3-203ENST00000468753 CCDC18Q5T9S5 1454 aa13.79□□□□□ -0.2
COL4A3-203ENST00000468753 KIF14Q15058 1648 aa13.78□□□□□ -0.2
COL4A3-203ENST00000468753 LOC105371045A0A1W2PR82 267 aa13.77□□□□□ -0.21
COL4A3-203ENST00000468753 PLCH2O75038 1416 aa13.76□□□□□ -0.21
COL4A3-203ENST00000468753 FRMPD1Q5SYB0 1578 aa13.75□□□□□ -0.21
COL4A3-203ENST00000468753 FANCAO15360 1455 aa13.75□□□□□ -0.21
COL4A3-203ENST00000468753 AKNAQ7Z591 1439 aa13.75□□□□□ -0.21
COL4A3-203ENST00000468753 CFAP74Q9C0B2 1584 aa13.75□□□□□ -0.21
COL4A3-203ENST00000468753 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
COL4A3-203ENST00000468753 KDM4FA0A1W2PPD8 638 aa13.73□□□□□ -0.21
COL4A3-203ENST00000468753 RAPGEF3O95398 923 aa13.73□□□□□ -0.21
COL4A3-203ENST00000468753 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
COL4A3-203ENST00000468753 MYO5CQ9NQX4 1742 aa13.73□□□□□ -0.21
COL4A3-203ENST00000468753 RICTORQ6R327 1708 aa13.71□□□□□ -0.21
COL4A3-203ENST00000468753 DENND4BO75064 1496 aaPredicted RBP13.71□□□□□ -0.21
COL4A3-203ENST00000468753 ADGRL1O94910 1474 aa13.69□□□□□ -0.22
COL4A3-203ENST00000468753 EFCAB2Q5VUJ9 269 aa13.68□□□□□ -0.22
COL4A3-203ENST00000468753 SCAPERQ9BY12 1400 aa13.67□□□□□ -0.22
COL4A3-203ENST00000468753 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-203ENST00000468753 ZMYM4Q5VZL5 1548 aa13.67□□□□□ -0.22
COL4A3-203ENST00000468753 PREX2Q70Z35 1606 aa13.67□□□□□ -0.22
COL4A3-203ENST00000468753 CDC42BPBQ9Y5S2 1711 aa13.67□□□□□ -0.22
COL4A3-203ENST00000468753 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
COL4A3-203ENST00000468753 ARHGAP5Q13017 1502 aa13.66□□□□□ -0.22
COL4A3-203ENST00000468753 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
COL4A3-203ENST00000468753 VPS8Q8N3P4 1428 aa13.65□□□□□ -0.22
COL4A3-203ENST00000468753 ARHGEF40Q8TER5 1519 aa13.65□□□□□ -0.22
COL4A3-203ENST00000468753 ZBTB22O15209 634 aa13.65□□□□□ -0.22
COL4A3-203ENST00000468753 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
COL4A3-203ENST00000468753 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
COL4A3-203ENST00000468753 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
COL4A3-203ENST00000468753 MAGI2Q86UL8 1455 aa13.62□□□□□ -0.23
COL4A3-203ENST00000468753 EHBP1L1Q8N3D4 1523 aa13.62□□□□□ -0.23
COL4A3-203ENST00000468753 GPATCH8Q9UKJ3 1502 aaKnown RBP13.62□□□□□ -0.23
COL4A3-203ENST00000468753 ABCC1P33527 1531 aa13.61□□□□□ -0.23
COL4A3-203ENST00000468753 ZFYVE16Q7Z3T8 1539 aa13.61□□□□□ -0.23
COL4A3-203ENST00000468753 YEATS2Q9ULM3 1422 aa13.61□□□□□ -0.23
COL4A3-203ENST00000468753 ARHGEF12Q9NZN5 1544 aa13.6□□□□□ -0.23
COL4A3-203ENST00000468753 KDM5CP41229 1560 aa13.6□□□□□ -0.23
COL4A3-203ENST00000468753 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
COL4A3-203ENST00000468753 ZNF518AQ6AHZ1 1483 aa13.6□□□□□ -0.23
COL4A3-203ENST00000468753 SAMD9LQ8IVG5 1584 aa13.58□□□□□ -0.23
COL4A3-203ENST00000468753 ITSN2Q9NZM3 1697 aa13.58□□□□□ -0.24
COL4A3-203ENST00000468753 CCNB3Q8WWL7 1395 aa13.58□□□□□ -0.24
COL4A3-203ENST00000468753 TRAPPC8Q9Y2L5 1435 aa13.57□□□□□ -0.24
COL4A3-203ENST00000468753 POLA2Q14181 598 aa13.57□□□□□ -0.24
COL4A3-203ENST00000468753 AFAP1Q8N556 730 aa13.57□□□□□ -0.24
COL4A3-203ENST00000468753 ADAMTSL3P82987 1691 aa13.56□□□□□ -0.24
COL4A3-203ENST00000468753 SIGLEC1Q9BZZ2 1709 aa13.56□□□□□ -0.24
COL4A3-203ENST00000468753 MAP3K1Q13233 1512 aa13.56□□□□□ -0.24
COL4A3-203ENST00000468753 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
COL4A3-203ENST00000468753 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
COL4A3-203ENST00000468753 MLH3Q9UHC1 1453 aa13.55□□□□□ -0.24
COL4A3-203ENST00000468753 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
COL4A3-203ENST00000468753 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
COL4A3-203ENST00000468753 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
COL4A3-203ENST00000468753 ATP10AO60312 1499 aa13.54□□□□□ -0.24
COL4A3-203ENST00000468753 LRRC9Q6ZRR7 1453 aa13.54□□□□□ -0.24
COL4A3-203ENST00000468753 SYCP2Q9BX26 1530 aa13.54□□□□□ -0.24
COL4A3-203ENST00000468753 SUPT6HQ7KZ85 1726 aaKnown RBP13.53□□□□□ -0.24
COL4A3-203ENST00000468753 C9orf84Q5VXU9 1444 aa13.53□□□□□ -0.24
COL4A3-203ENST00000468753 DIP2CQ9Y2E4 1556 aa13.53□□□□□ -0.24
COL4A3-203ENST00000468753 ZNF777Q9ULD5 760 aaPredicted RBP13.52□□□□□ -0.25
COL4A3-203ENST00000468753 PLEKHH2Q8IVE3 1493 aa13.52□□□□□ -0.25
COL4A3-203ENST00000468753 ABCA6Q8N139 1617 aa13.51□□□□□ -0.25
COL4A3-203ENST00000468753 ARID4BQ4LE39 1312 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-203ENST00000468753 MADDQ8WXG6 1647 aa13.5□□□□□ -0.25
COL4A3-203ENST00000468753 REREQ9P2R6 1566 aa13.5□□□□□ -0.25
COL4A3-203ENST00000468753 HNRNPMP52272 730 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL4A3-203ENST00000468753 KANK4Q5T7N3 995 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-203ENST00000468753 KIDINS220Q9ULH0 1771 aa13.5□□□□□ -0.25
COL4A3-203ENST00000468753 PTPRMP28827 1452 aa13.49□□□□□ -0.25
COL4A3-203ENST00000468753 ZNF644Q9H582 1327 aaPredicted RBP13.49□□□□□ -0.25
COL4A3-203ENST00000468753 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
COL4A3-203ENST00000468753 INO80Q9ULG1 1556 aaPredicted RBP13.46□□□□□ -0.25
COL4A3-203ENST00000468753 SPAG9O60271 1321 aaKnown RBP13.45□□□□□ -0.26
COL4A3-203ENST00000468753 AGLP35573 1532 aa13.45□□□□□ -0.26
COL4A3-203ENST00000468753 ATP7AQ04656 1500 aa13.45□□□□□ -0.26
COL4A3-203ENST00000468753 RIMS1Q86UR5 1692 aaKnown RBP13.45□□□□□ -0.26
COL4A3-203ENST00000468753 CAMSAP2Q08AD1 1489 aa13.45□□□□□ -0.26
COL4A3-203ENST00000468753 MYT1LQ9UL68 1186 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms