RNA–Protein interactions for RNA: ENST00000468704.1

TMEM50A-202, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 799 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-202ENST00000468704 CDC42BPAQ5VT25 1732 aa27.77■■■□□ 2.04
TMEM50A-202ENST00000468704 ARHGAP5Q13017 1502 aa27.76■■■□□ 2.03
TMEM50A-202ENST00000468704 POGZQ7Z3K3 1410 aa27.72■■■□□ 2.03
TMEM50A-202ENST00000468704 ZFYVE16Q7Z3T8 1539 aa27.7■■■□□ 2.02
TMEM50A-202ENST00000468704 BCORL1Q5H9F3 1711 aa27.7■■■□□ 2.02
TMEM50A-202ENST00000468704 SCAPERQ9BY12 1400 aa27.68■■■□□ 2.02
TMEM50A-202ENST00000468704 ADAMTSL3P82987 1691 aa27.68■■■□□ 2.02
TMEM50A-202ENST00000468704 EFCAB2Q5VUJ9 269 aa27.67■■■□□ 2.02
TMEM50A-202ENST00000468704 MAGI2Q86UL8 1455 aa27.67■■■□□ 2.02
TMEM50A-202ENST00000468704 ITSN2Q9NZM3 1697 aa27.66■■■□□ 2.02
TMEM50A-202ENST00000468704 ABCC1P33527 1531 aa27.63■■■□□ 2.01
TMEM50A-202ENST00000468704 KDM5CP41229 1560 aa27.63■■■□□ 2.01
TMEM50A-202ENST00000468704 ZNF518AQ6AHZ1 1483 aa27.62■■■□□ 2.01
TMEM50A-202ENST00000468704 EHBP1L1Q8N3D4 1523 aa27.61■■■□□ 2.01
TMEM50A-202ENST00000468704 SIGLEC1Q9BZZ2 1709 aa27.61■■■□□ 2.01
TMEM50A-202ENST00000468704 HECW2Q9P2P5 1572 aa27.6■■■□□ 2.01
TMEM50A-202ENST00000468704 YEATS2Q9ULM3 1422 aa27.58■■■□□ 2.01
TMEM50A-202ENST00000468704 MADDQ8WXG6 1647 aa27.58■■■□□ 2.01
TMEM50A-202ENST00000468704 MTUS2Q5JR59 1369 aa27.55■■■□□ 2
TMEM50A-202ENST00000468704 SAMD9LQ8IVG5 1584 aa27.54■■■□□ 2
TMEM50A-202ENST00000468704 RIMS1Q86UR5 1692 aaKnown RBP27.52■■■□□ 2
TMEM50A-202ENST00000468704 FER1L4A9Z1Z3 1794 aa27.51■■□□□ 1.99
TMEM50A-202ENST00000468704 ARID4BQ4LE39 1312 aaPredicted RBP27.51■■□□□ 1.99
TMEM50A-202ENST00000468704 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
TMEM50A-202ENST00000468704 GPATCH8Q9UKJ3 1502 aaKnown RBP27.51■■□□□ 1.99
TMEM50A-202ENST00000468704 TIAM1Q13009 1591 aa27.5■■□□□ 1.99
TMEM50A-202ENST00000468704 SUPT6HQ7KZ85 1726 aaKnown RBP27.5■■□□□ 1.99
TMEM50A-202ENST00000468704 VPS8Q8N3P4 1428 aa27.5■■□□□ 1.99
TMEM50A-202ENST00000468704 ABCA6Q8N139 1617 aa27.49■■□□□ 1.99
TMEM50A-202ENST00000468704 DIP2CQ9Y2E4 1556 aa27.49■■□□□ 1.99
TMEM50A-202ENST00000468704 C9orf84Q5VXU9 1444 aa27.49■■□□□ 1.99
TMEM50A-202ENST00000468704 ARHGEF12Q9NZN5 1544 aa27.48■■□□□ 1.99
TMEM50A-202ENST00000468704 ATP10AO60312 1499 aa27.48■■□□□ 1.99
TMEM50A-202ENST00000468704 PTPRMP28827 1452 aa27.47■■□□□ 1.99
TMEM50A-202ENST00000468704 SYCP2Q9BX26 1530 aa27.46■■□□□ 1.99
TMEM50A-202ENST00000468704 KIDINS220Q9ULH0 1771 aa27.45■■□□□ 1.99
TMEM50A-202ENST00000468704 REREQ9P2R6 1566 aa27.45■■□□□ 1.99
TMEM50A-202ENST00000468704 CCNB3Q8WWL7 1395 aa27.45■■□□□ 1.98
TMEM50A-202ENST00000468704 MLH3Q9UHC1 1453 aa27.44■■□□□ 1.98
TMEM50A-202ENST00000468704 TRAPPC8Q9Y2L5 1435 aa27.43■■□□□ 1.98
TMEM50A-202ENST00000468704 PLEKHH2Q8IVE3 1493 aa27.42■■□□□ 1.98
TMEM50A-202ENST00000468704 AFAP1Q8N556 730 aa27.41■■□□□ 1.98
TMEM50A-202ENST00000468704 INO80Q9ULG1 1556 aaPredicted RBP27.36■■□□□ 1.97
TMEM50A-202ENST00000468704 ZNF777Q9ULD5 760 aaPredicted RBP27.36■■□□□ 1.97
TMEM50A-202ENST00000468704 KIAA1107Q9UPP5 1409 aa27.35■■□□□ 1.97
TMEM50A-202ENST00000468704 CFDP1Q9UEE9 299 aaPredicted RBP27.35■■□□□ 1.97
TMEM50A-202ENST00000468704 NCOA2Q15596 1464 aa27.34■■□□□ 1.97
TMEM50A-202ENST00000468704 MYT1LQ9UL68 1186 aa27.34■■□□□ 1.97
TMEM50A-202ENST00000468704 MAP3K1Q13233 1512 aa27.34■■□□□ 1.97
TMEM50A-202ENST00000468704 ATP7AQ04656 1500 aa27.32■■□□□ 1.96
TMEM50A-202ENST00000468704 LRRC9Q6ZRR7 1453 aa27.31■■□□□ 1.96
TMEM50A-202ENST00000468704 AGLP35573 1532 aa27.31■■□□□ 1.96
TMEM50A-202ENST00000468704 ADGBQ8N7X0 1667 aa27.27■■□□□ 1.96
TMEM50A-202ENST00000468704 MLECQ14165 292 aa27.26■■□□□ 1.95
TMEM50A-202ENST00000468704 HNRNPMP52272 730 aaKnown RBP eCLIP27.24■■□□□ 1.95
TMEM50A-202ENST00000468704 SPAG9O60271 1321 aaKnown RBP27.23■■□□□ 1.95
TMEM50A-202ENST00000468704 CAMSAP2Q08AD1 1489 aa27.23■■□□□ 1.95
TMEM50A-202ENST00000468704 PLXNC1O60486 1568 aa27.22■■□□□ 1.95
TMEM50A-202ENST00000468704 MBD5Q9P267 1494 aa27.2■■□□□ 1.95
TMEM50A-202ENST00000468704 PREX1Q8TCU6 1659 aa27.19■■□□□ 1.94
TMEM50A-202ENST00000468704 LMTK3Q96Q04 1460 aa27.18■■□□□ 1.94
TMEM50A-202ENST00000468704 C3P01024 1663 aa27.17■■□□□ 1.94
TMEM50A-202ENST00000468704 CCDC141Q6ZP82 1450 aa27.17■■□□□ 1.94
TMEM50A-202ENST00000468704 ARHGEF5Q12774 1597 aa27.17■■□□□ 1.94
TMEM50A-202ENST00000468704 ZNF644Q9H582 1327 aaPredicted RBP27.16■■□□□ 1.94
TMEM50A-202ENST00000468704 MROH2AA6NES4 1674 aa27.15■■□□□ 1.94
TMEM50A-202ENST00000468704 A2MP01023 1474 aa27.13■■□□□ 1.93
TMEM50A-202ENST00000468704 SETD1BQ9UPS6 1966 aaKnown RBP27.13■■□□□ 1.93
TMEM50A-202ENST00000468704 RTEL1-TNFRSF6BF6WH68 1400 aa27.11■■□□□ 1.93
TMEM50A-202ENST00000468704 KANK4Q5T7N3 995 aaPredicted RBP27.1■■□□□ 1.93
TMEM50A-202ENST00000468704 PLPPR3Q6T4P5 718 aa27.1■■□□□ 1.93
TMEM50A-202ENST00000468704 MYOM3Q5VTT5 1437 aa27.08■■□□□ 1.93
TMEM50A-202ENST00000468704 CNTLNQ9NXG0 1405 aa27.07■■□□□ 1.92
TMEM50A-202ENST00000468704 CLTCQ00610 1675 aaKnown RBP27.07■■□□□ 1.92
TMEM50A-202ENST00000468704 APLP2Q06481 763 aa27.06■■□□□ 1.92
TMEM50A-202ENST00000468704 MIA2Q96PC5 1412 aa27.06■■□□□ 1.92
TMEM50A-202ENST00000468704 MAST1Q9Y2H9 1570 aa27.05■■□□□ 1.92
TMEM50A-202ENST00000468704 CROCC2H7BZ55 1655 aa27.03■■□□□ 1.92
TMEM50A-202ENST00000468704 ESF1Q9H501 851 aaKnown RBP27.03■■□□□ 1.92
TMEM50A-202ENST00000468704 RSPH4AQ5TD94 716 aa27.02■■□□□ 1.92
TMEM50A-202ENST00000468704 PTPN23Q9H3S7 1636 aa27■■□□□ 1.91
TMEM50A-202ENST00000468704 CEBPAP49715 358 aaPredicted RBP26.98■■□□□ 1.91
TMEM50A-202ENST00000468704 DHX29Q7Z478 1369 aaKnown RBP26.95■■□□□ 1.9
TMEM50A-202ENST00000468704 UHRF1BP1Q6BDS2 1440 aa26.94■■□□□ 1.9
TMEM50A-202ENST00000468704 FAM135AQ9P2D6 1515 aa26.93■■□□□ 1.9
TMEM50A-202ENST00000468704 EIF2AK4Q9P2K8 1649 aaKnown RBP26.92■■□□□ 1.9
TMEM50A-202ENST00000468704 TSPY4P0CV99 314 aa26.91■■□□□ 1.9
TMEM50A-202ENST00000468704 TSPY10P0CW01 314 aa26.91■■□□□ 1.9
TMEM50A-202ENST00000468704 DNMT1P26358 1616 aaKnown RBP26.9■■□□□ 1.9
TMEM50A-202ENST00000468704 HSPA2P54652 639 aa26.9■■□□□ 1.9
TMEM50A-202ENST00000468704 RNF17Q9BXT8 1623 aaKnown RBP26.9■■□□□ 1.9
TMEM50A-202ENST00000468704 NPATQ14207 1427 aa26.9■■□□□ 1.9
TMEM50A-202ENST00000468704 FGD6Q6ZV73 1430 aa26.89■■□□□ 1.89
TMEM50A-202ENST00000468704 SHANK2Q9UPX8 1470 aa26.88■■□□□ 1.89
TMEM50A-202ENST00000468704 ZNF142P52746 1687 aaPredicted RBP26.88■■□□□ 1.89
TMEM50A-202ENST00000468704 TCOF1Q13428 1488 aaKnown RBP26.87■■□□□ 1.89
TMEM50A-202ENST00000468704 MYO3AQ8NEV4 1616 aa26.87■■□□□ 1.89
TMEM50A-202ENST00000468704 KDM5DQ9BY66 1539 aa26.87■■□□□ 1.89
TMEM50A-202ENST00000468704 GGT6Q6P531 493 aa26.87■■□□□ 1.89
TMEM50A-202ENST00000468704 STRCQ7RTU9 1775 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms