RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 FBXO22Q8NEZ5 403 aa7□□□□□ -1.29
CDHR3-206ENST00000468477 MS4A4AQ96JQ5 239 aa7□□□□□ -1.29
CDHR3-206ENST00000468477 ST18O60284 1047 aa6.99□□□□□ -1.29
CDHR3-206ENST00000468477 CDAN1Q8IWY9 1227 aa6.97□□□□□ -1.29
CDHR3-206ENST00000468477 TMC2Q8TDI7 906 aa6.95□□□□□ -1.3
CDHR3-206ENST00000468477 EMP3P54852 163 aa6.94□□□□□ -1.3
CDHR3-206ENST00000468477 BCANQ96GW7 911 aa6.94□□□□□ -1.3
CDHR3-206ENST00000468477 ARXQ96QS3 562 aa6.93□□□□□ -1.3
CDHR3-206ENST00000468477 DNAJC5Q9H3Z4 198 aa6.92□□□□□ -1.3
CDHR3-206ENST00000468477 ZSWIM6Q9HCJ5 1215 aa6.92□□□□□ -1.3
CDHR3-206ENST00000468477 MARVELD3Q96A59 401 aa6.91□□□□□ -1.3
CDHR3-206ENST00000468477 HOXB3P14651 431 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-206ENST00000468477 HOXB1P14653 301 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-206ENST00000468477 TMEM92Q6UXU6 159 aa6.88□□□□□ -1.31
CDHR3-206ENST00000468477 ERBB3P21860 1342 aa6.87□□□□□ -1.31
CDHR3-206ENST00000468477 C2orf72A6NCS6 295 aa6.87□□□□□ -1.31
CDHR3-206ENST00000468477 FAM205CA6NFA0 338 aa6.87□□□□□ -1.31
CDHR3-206ENST00000468477 PPP1R37O75864 691 aa6.87□□□□□ -1.31
CDHR3-206ENST00000468477 TIMELESSQ9UNS1 1208 aa6.86□□□□□ -1.31
CDHR3-206ENST00000468477 PLCB2Q00722 1185 aa6.85□□□□□ -1.31
CDHR3-206ENST00000468477 KIF3CO14782 793 aa6.84□□□□□ -1.31
CDHR3-206ENST00000468477 NKX1-1Q15270 411 aaPredicted RBP6.84□□□□□ -1.31
CDHR3-206ENST00000468477 TPRNQ4KMQ1 711 aa6.84□□□□□ -1.31
CDHR3-206ENST00000468477 HS3ST6Q96QI5 342 aa6.84□□□□□ -1.31
CDHR3-206ENST00000468477 TBC1D12O60347 775 aa6.83□□□□□ -1.32
CDHR3-206ENST00000468477 SPNS2Q8IVW8 549 aa6.83□□□□□ -1.32
CDHR3-206ENST00000468477 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-206ENST00000468477 HAP1P54257 671 aaPredicted RBP6.82□□□□□ -1.32
CDHR3-206ENST00000468477 MMRN1Q13201 1228 aa6.82□□□□□ -1.32
CDHR3-206ENST00000468477 GPHNQ9NQX3 736 aaPredicted RBP6.82□□□□□ -1.32
CDHR3-206ENST00000468477 TULP1O00294 542 aaPredicted RBP6.81□□□□□ -1.32
CDHR3-206ENST00000468477 SLC34A2O95436 690 aa6.81□□□□□ -1.32
CDHR3-206ENST00000468477 PDE4AP27815 886 aa6.81□□□□□ -1.32
CDHR3-206ENST00000468477 ARSIQ5FYB1 569 aa6.81□□□□□ -1.32
CDHR3-206ENST00000468477 BBXQ8WY36 941 aaPredicted RBP6.81□□□□□ -1.32
CDHR3-206ENST00000468477 FOXK1P85037 733 aa6.8□□□□□ -1.32
CDHR3-206ENST00000468477 GPR153Q6NV75 609 aa6.8□□□□□ -1.32
CDHR3-206ENST00000468477 GTPBP6O43824 516 aaPredicted RBP6.79□□□□□ -1.32
CDHR3-206ENST00000468477 VARS2Q5ST30 1063 aaKnown RBP6.79□□□□□ -1.32
CDHR3-206ENST00000468477 PLPP6Q8IY26 295 aa6.79□□□□□ -1.32
CDHR3-206ENST00000468477 PSDA5PKW4 1024 aaPredicted RBP6.77□□□□□ -1.33
CDHR3-206ENST00000468477 PCDHGA4Q9Y5G9 962 aa6.77□□□□□ -1.33
CDHR3-206ENST00000468477 ZNF316A6NFI3 1004 aaPredicted RBP6.76□□□□□ -1.33
CDHR3-206ENST00000468477 NUDT7P0C024 238 aa6.76□□□□□ -1.33
CDHR3-206ENST00000468477 DSG2Q14126 1118 aa6.76□□□□□ -1.33
CDHR3-206ENST00000468477 SPRYD3Q8NCJ5 442 aa6.76□□□□□ -1.33
CDHR3-206ENST00000468477 PPP1R15BQ5SWA1 713 aa6.75□□□□□ -1.33
CDHR3-206ENST00000468477 HOMEZQ8IX15 550 aa6.75□□□□□ -1.33
CDHR3-206ENST00000468477 ZNF687Q8N1G0 1237 aa6.75□□□□□ -1.33
CDHR3-206ENST00000468477 POTEB3A0JP26 581 aa6.74□□□□□ -1.33
CDHR3-206ENST00000468477 POTEBQ6S5H4 581 aa6.74□□□□□ -1.33
CDHR3-206ENST00000468477 PTCD2Q8WV60 388 aaKnown RBP6.74□□□□□ -1.33
CDHR3-206ENST00000468477 DDX27Q96GQ7 796 aaKnown RBP6.74□□□□□ -1.33
CDHR3-206ENST00000468477 CRISPLD2Q9H0B8 497 aa6.74□□□□□ -1.33
CDHR3-206ENST00000468477 KHSRPQ92945 711 aaKnown RBP eCLIP6.73□□□□□ -1.33
CDHR3-206ENST00000468477 LARP6Q9BRS8 491 aaKnown RBP6.73□□□□□ -1.33
CDHR3-206ENST00000468477 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
CDHR3-206ENST00000468477 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
CDHR3-206ENST00000468477 KCNH8Q96L42 1107 aa6.72□□□□□ -1.33
CDHR3-206ENST00000468477 PBX2P40425 430 aa6.71□□□□□ -1.34
CDHR3-206ENST00000468477 LHX6Q9UPM6 363 aa6.71□□□□□ -1.34
CDHR3-206ENST00000468477 UPF1Q92900 1129 aaKnown RBP eCLIP6.7□□□□□ -1.34
CDHR3-206ENST00000468477 CFAP44Q96MT7 982 aa6.7□□□□□ -1.34
CDHR3-206ENST00000468477 RANGAP1P46060 587 aaPredicted RBP6.69□□□□□ -1.34
CDHR3-206ENST00000468477 MAP3K9P80192 1104 aa6.69□□□□□ -1.34
CDHR3-206ENST00000468477 PPP4R3BQ5MIZ7 849 aa6.69□□□□□ -1.34
CDHR3-206ENST00000468477 GTF3C3Q9Y5Q9 886 aa6.69□□□□□ -1.34
CDHR3-206ENST00000468477 NCKAP5LQ9HCH0 1330 aa6.69□□□□□ -1.34
CDHR3-206ENST00000468477 PTGER2P43116 358 aa6.68□□□□□ -1.34
CDHR3-206ENST00000468477 PAXIP1Q6ZW49 1069 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-206ENST00000468477 VSIG10Q8N0Z9 540 aa6.68□□□□□ -1.34
CDHR3-206ENST00000468477 OXER1Q8TDS5 423 aa6.67□□□□□ -1.34
CDHR3-206ENST00000468477 MFSD10Q14728 455 aa6.66□□□□□ -1.34
CDHR3-206ENST00000468477 ANKRD13DQ6ZTN6 518 aa6.66□□□□□ -1.34
CDHR3-206ENST00000468477 WDR70Q9NW82 654 aa6.66□□□□□ -1.34
CDHR3-206ENST00000468477 ERICH6Q7L0X2 663 aa6.65□□□□□ -1.34
CDHR3-206ENST00000468477 ARHGAP33O14559 1287 aa6.64□□□□□ -1.35
CDHR3-206ENST00000468477 LSM11P83369 360 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDHR3-206ENST00000468477 STAC3Q96MF2 364 aa6.64□□□□□ -1.35
CDHR3-206ENST00000468477 EVI5O60447 810 aa6.63□□□□□ -1.35
CDHR3-206ENST00000468477 ZNF454Q8N9F8 522 aa6.62□□□□□ -1.35
CDHR3-206ENST00000468477 MYT1LQ9UL68 1186 aa6.62□□□□□ -1.35
CDHR3-206ENST00000468477 CADPS2Q86UW7 1296 aa6.61□□□□□ -1.35
CDHR3-206ENST00000468477 KDM4FA0A1W2PPD8 638 aa6.6□□□□□ -1.35
CDHR3-206ENST00000468477 RNF166Q96A37 237 aaPredicted RBP6.6□□□□□ -1.35
CDHR3-206ENST00000468477 AXIN2Q9Y2T1 843 aa6.6□□□□□ -1.35
CDHR3-206ENST00000468477 PTPREP23469 700 aa6.59□□□□□ -1.35
CDHR3-206ENST00000468477 JPH4Q96JJ6 628 aa6.59□□□□□ -1.35
CDHR3-206ENST00000468477 ANO8Q9HCE9 1232 aaPredicted RBP6.58□□□□□ -1.36
CDHR3-206ENST00000468477 TK2O00142 265 aa6.57□□□□□ -1.36
CDHR3-206ENST00000468477 ZDHHC16Q969W1 377 aa6.57□□□□□ -1.36
CDHR3-206ENST00000468477 KCNK17Q96T54 332 aa6.57□□□□□ -1.36
CDHR3-206ENST00000468477 FOSBP53539 338 aa6.56□□□□□ -1.36
CDHR3-206ENST00000468477 CAMK2BQ13554 666 aa6.56□□□□□ -1.36
CDHR3-206ENST00000468477 E2F4Q16254 413 aa6.56□□□□□ -1.36
CDHR3-206ENST00000468477 ADGRD1Q6QNK2 874 aa6.56□□□□□ -1.36
CDHR3-206ENST00000468477 FBXW7Q969H0 707 aa6.56□□□□□ -1.36
CDHR3-206ENST00000468477 BCL2L12Q9HB09 334 aa6.56□□□□□ -1.36
CDHR3-206ENST00000468477 EMILIN3Q9NT22 766 aa6.56□□□□□ -1.36
CDHR3-206ENST00000468477 PSEN2P49810 448 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms