RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SNPHO15079 494 aa10.14□□□□□ -0.79
SMC4-208ENST00000467468 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
SMC4-208ENST00000467468 TMEM92Q6UXU6 159 aa10.1□□□□□ -0.79
SMC4-208ENST00000467468 C2orf72A6NCS6 295 aa10.09□□□□□ -0.79
SMC4-208ENST00000467468 PDE4AP27815 886 aa10.09□□□□□ -0.79
SMC4-208ENST00000467468 GPHNQ9NQX3 736 aaPredicted RBP10.08□□□□□ -0.8
SMC4-208ENST00000467468 KIF3CO14782 793 aa10.07□□□□□ -0.8
SMC4-208ENST00000467468 CRISPLD2Q9H0B8 497 aa10.07□□□□□ -0.8
SMC4-208ENST00000467468 DOK7Q18PE1 504 aa10.06□□□□□ -0.8
SMC4-208ENST00000467468 RIMBP2O15034 1052 aa10.05□□□□□ -0.8
SMC4-208ENST00000467468 FOXK1P85037 733 aa10.03□□□□□ -0.8
SMC4-208ENST00000467468 NCKAP5LQ9HCH0 1330 aa10.03□□□□□ -0.8
SMC4-208ENST00000467468 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.81
SMC4-208ENST00000467468 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.81
SMC4-208ENST00000467468 DDX27Q96GQ7 796 aaKnown RBP10.02□□□□□ -0.81
SMC4-208ENST00000467468 LARP6Q9BRS8 491 aaKnown RBP10.02□□□□□ -0.81
SMC4-208ENST00000467468 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
SMC4-208ENST00000467468 DSG2Q14126 1118 aa10□□□□□ -0.81
SMC4-208ENST00000467468 PLPP6Q8IY26 295 aa10□□□□□ -0.81
SMC4-208ENST00000467468 HAP1P54257 671 aaPredicted RBP9.99□□□□□ -0.81
SMC4-208ENST00000467468 TSHZ2Q9NRE2 1034 aa9.99□□□□□ -0.81
SMC4-208ENST00000467468 MFSD10Q14728 455 aa9.98□□□□□ -0.81
SMC4-208ENST00000467468 FAM163AQ96GL9 167 aaPredicted RBP9.98□□□□□ -0.81
SMC4-208ENST00000467468 WDR70Q9NW82 654 aa9.98□□□□□ -0.81
SMC4-208ENST00000467468 HOXB3P14651 431 aaPredicted RBP9.97□□□□□ -0.81
SMC4-208ENST00000467468 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
SMC4-208ENST00000467468 SLC34A2O95436 690 aa9.95□□□□□ -0.82
SMC4-208ENST00000467468 ST18O60284 1047 aa9.92□□□□□ -0.82
SMC4-208ENST00000467468 TBC1D12O60347 775 aa9.92□□□□□ -0.82
SMC4-208ENST00000467468 HOXB1P14653 301 aaPredicted RBP9.89□□□□□ -0.83
SMC4-208ENST00000467468 PTCD2Q8WV60 388 aaKnown RBP9.89□□□□□ -0.83
SMC4-208ENST00000467468 ZNF316A6NFI3 1004 aaPredicted RBP9.88□□□□□ -0.83
SMC4-208ENST00000467468 PCDHGA4Q9Y5G9 962 aa9.88□□□□□ -0.83
SMC4-208ENST00000467468 EMP3P54852 163 aa9.86□□□□□ -0.83
SMC4-208ENST00000467468 E2F4Q16254 413 aa9.86□□□□□ -0.83
SMC4-208ENST00000467468 GPR153Q6NV75 609 aa9.86□□□□□ -0.83
SMC4-208ENST00000467468 UPF1Q92900 1129 aaKnown RBP eCLIP9.86□□□□□ -0.831e-11■■■■□ 26.2
SMC4-208ENST00000467468 CAMK2BQ13554 666 aa9.85□□□□□ -0.83
SMC4-208ENST00000467468 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
SMC4-208ENST00000467468 OXER1Q8TDS5 423 aa9.85□□□□□ -0.83
SMC4-208ENST00000467468 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
SMC4-208ENST00000467468 VSIG10Q8N0Z9 540 aa9.84□□□□□ -0.83
SMC4-208ENST00000467468 MAP3K9P80192 1104 aa9.83□□□□□ -0.84
SMC4-208ENST00000467468 P3H3Q8IVL6 736 aa9.82□□□□□ -0.84
SMC4-208ENST00000467468 NUDT7P0C024 238 aa9.81□□□□□ -0.84
SMC4-208ENST00000467468 MARVELD3Q96A59 401 aa9.81□□□□□ -0.84
SMC4-208ENST00000467468 EMILIN3Q9NT22 766 aa9.81□□□□□ -0.84
SMC4-208ENST00000467468 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
SMC4-208ENST00000467468 ERBB3P21860 1342 aa9.8□□□□□ -0.84
SMC4-208ENST00000467468 POTEMA6NI47 508 aa9.79□□□□□ -0.84
SMC4-208ENST00000467468 KHSRPQ92945 711 aaKnown RBP eCLIP9.79□□□□□ -0.843e-15■■■■■ 43.1
SMC4-208ENST00000467468 PSDA5PKW4 1024 aaPredicted RBP9.77□□□□□ -0.85
SMC4-208ENST00000467468 DPYSL4O14531 572 aa9.76□□□□□ -0.85
SMC4-208ENST00000467468 EVI5O60447 810 aa9.76□□□□□ -0.85
SMC4-208ENST00000467468 ARIH1Q9Y4X5 557 aaPredicted RBP9.76□□□□□ -0.85
SMC4-208ENST00000467468 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
SMC4-208ENST00000467468 SPDYE16A6NNV3 312 aaPredicted RBP9.74□□□□□ -0.85
SMC4-208ENST00000467468 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
SMC4-208ENST00000467468 VARS2Q5ST30 1063 aaKnown RBP9.73□□□□□ -0.85
SMC4-208ENST00000467468 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
SMC4-208ENST00000467468 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
SMC4-208ENST00000467468 HS3ST6Q96QI5 342 aa9.73□□□□□ -0.85
SMC4-208ENST00000467468 KDM2AQ9Y2K7 1162 aa9.73□□□□□ -0.85
SMC4-208ENST00000467468 KDM4FA0A1W2PPD8 638 aa9.72□□□□□ -0.85
SMC4-208ENST00000467468 PDIA6Q15084 440 aa9.71□□□□□ -0.86
SMC4-208ENST00000467468 ANO8Q9HCE9 1232 aaPredicted RBP9.71□□□□□ -0.86
SMC4-208ENST00000467468 PPP4R3BQ5MIZ7 849 aa9.7□□□□□ -0.86
SMC4-208ENST00000467468 PCDH10Q9P2E7 1040 aa9.69□□□□□ -0.86
SMC4-208ENST00000467468 JPH4Q96JJ6 628 aa9.68□□□□□ -0.86
SMC4-208ENST00000467468 ZNF454Q8N9F8 522 aa9.67□□□□□ -0.86
SMC4-208ENST00000467468 PTGER2P43116 358 aa9.65□□□□□ -0.86
SMC4-208ENST00000467468 CDAN1Q8IWY9 1227 aa9.65□□□□□ -0.86
SMC4-208ENST00000467468 ZNF687Q8N1G0 1237 aa9.65□□□□□ -0.86
SMC4-208ENST00000467468 KCNH8Q96L42 1107 aa9.65□□□□□ -0.86
SMC4-208ENST00000467468 PBX2P40425 430 aa9.64□□□□□ -0.87
SMC4-208ENST00000467468 FOSBP53539 338 aa9.64□□□□□ -0.87
SMC4-208ENST00000467468 PHF14O94880 888 aa9.63□□□□□ -0.87
SMC4-208ENST00000467468 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
SMC4-208ENST00000467468 EPAS1Q99814 870 aa9.63□□□□□ -0.87
SMC4-208ENST00000467468 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
SMC4-208ENST00000467468 TYW1BQ6NUM6 668 aa9.62□□□□□ -0.87
SMC4-208ENST00000467468 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
SMC4-208ENST00000467468 ZDHHC16Q969W1 377 aa9.62□□□□□ -0.87
SMC4-208ENST00000467468 DDX12PQ92771 950 aa9.61□□□□□ -0.87
SMC4-208ENST00000467468 NBR1Q14596 966 aa9.59□□□□□ -0.87
SMC4-208ENST00000467468 PCDHGA10Q9Y5H3 936 aa9.59□□□□□ -0.87
SMC4-208ENST00000467468 GRXCR2A6NFK2 248 aa9.58□□□□□ -0.88
SMC4-208ENST00000467468 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
SMC4-208ENST00000467468 ARHGAP33O14559 1287 aa9.57□□□□□ -0.88
SMC4-208ENST00000467468 PTPREP23469 700 aa9.56□□□□□ -0.88
SMC4-208ENST00000467468 SMYD5Q6GMV2 418 aa9.55□□□□□ -0.88
SMC4-208ENST00000467468 EN1Q05925 392 aaPredicted RBP9.54□□□□□ -0.88
SMC4-208ENST00000467468 KCNK17Q96T54 332 aa9.54□□□□□ -0.88
SMC4-208ENST00000467468 ADAM33Q9BZ11 813 aa9.54□□□□□ -0.88
SMC4-208ENST00000467468 TULP1O00294 542 aaPredicted RBP9.53□□□□□ -0.88
SMC4-208ENST00000467468 MAP3K7O43318 606 aa9.53□□□□□ -0.88
SMC4-208ENST00000467468 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
SMC4-208ENST00000467468 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
SMC4-208ENST00000467468 SEMA3EO15041 775 aa9.52□□□□□ -0.89
SMC4-208ENST00000467468 LSM11P83369 360 aaKnown RBP eCLIP9.52□□□□□ -0.897e-97■■■■■ 245.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms