RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 DDRGK1Q96HY6 314 aa7.86□□□□□ -1.15
MSH2-205ENST00000467323 MLLT3P42568 568 aaPredicted RBP7.84□□□□□ -1.15
MSH2-205ENST00000467323 ARID3CA6NKF2 412 aa7.83□□□□□ -1.16
MSH2-205ENST00000467323 FAM117AQ9C073 453 aa7.83□□□□□ -1.16
MSH2-205ENST00000467323 CCDC61Q9Y6R9 512 aa7.82□□□□□ -1.16
MSH2-205ENST00000467323 SPDYE16A6NNV3 312 aaPredicted RBP7.8□□□□□ -1.16
MSH2-205ENST00000467323 MINK1Q8N4C8 1332 aaPredicted RBP7.79□□□□□ -1.16
MSH2-205ENST00000467323 A6NJR5 290 aa7.78□□□□□ -1.16
MSH2-205ENST00000467323 IFNL1Q8IU54 200 aa7.78□□□□□ -1.16
MSH2-205ENST00000467323 GOPCQ9HD26 462 aa7.78□□□□□ -1.16
MSH2-205ENST00000467323 PLEKHG3A1L390 1219 aa7.77□□□□□ -1.17
MSH2-205ENST00000467323 FARP1Q9Y4F1 1045 aaPredicted RBP7.77□□□□□ -1.17
MSH2-205ENST00000467323 PITPNM1O00562 1244 aa7.76□□□□□ -1.17
MSH2-205ENST00000467323 PAK3O75914 559 aaPredicted RBP7.76□□□□□ -1.17
MSH2-205ENST00000467323 TRAK2O60296 914 aa7.75□□□□□ -1.17
MSH2-205ENST00000467323 MAP2K5Q13163 448 aa7.75□□□□□ -1.17
MSH2-205ENST00000467323 AMHR2Q16671 573 aa7.75□□□□□ -1.17
MSH2-205ENST00000467323 PPP1R15BQ5SWA1 713 aa7.75□□□□□ -1.17
MSH2-205ENST00000467323 CCDC82Q8N4S0 544 aa7.75□□□□□ -1.17
MSH2-205ENST00000467323 PDIA6Q15084 440 aa7.74□□□□□ -1.17
MSH2-205ENST00000467323 MS4A4AQ96JQ5 239 aa7.74□□□□□ -1.17
MSH2-205ENST00000467323 GPR37O15354 613 aa7.73□□□□□ -1.17
MSH2-205ENST00000467323 ONECUT3O60422 494 aaPredicted RBP7.73□□□□□ -1.17
MSH2-205ENST00000467323 GOLGA2Q08379 1002 aa7.73□□□□□ -1.17
MSH2-205ENST00000467323 CHADLQ6NUI6 762 aa7.73□□□□□ -1.17
MSH2-205ENST00000467323 CCDC102AQ96A19 550 aa7.73□□□□□ -1.17
MSH2-205ENST00000467323 DPYSL4O14531 572 aa7.72□□□□□ -1.17
MSH2-205ENST00000467323 IRF6O14896 467 aa7.72□□□□□ -1.17
MSH2-205ENST00000467323 PARP9Q8IXQ6 854 aa7.72□□□□□ -1.17
MSH2-205ENST00000467323 MAP3K13O43283 966 aa7.71□□□□□ -1.18
MSH2-205ENST00000467323 PCMTD1Q96MG8 357 aaPredicted RBP7.71□□□□□ -1.18
MSH2-205ENST00000467323 GPHNQ9NQX3 736 aaPredicted RBP7.71□□□□□ -1.18
MSH2-205ENST00000467323 KCTD17Q8N5Z5 321 aa7.7□□□□□ -1.18
MSH2-205ENST00000467323 NECTIN2Q92692 538 aa7.7□□□□□ -1.18
MSH2-205ENST00000467323 CLUAP1Q96AJ1 413 aa7.7□□□□□ -1.18
MSH2-205ENST00000467323 KIF12Q96FN5 646 aa7.7□□□□□ -1.18
MSH2-205ENST00000467323 NUTM2FA1L443 756 aa7.68□□□□□ -1.18
MSH2-205ENST00000467323 CACNB1Q02641 598 aaPredicted RBP7.68□□□□□ -1.18
MSH2-205ENST00000467323 TRAIPQ9BWF2 469 aa7.68□□□□□ -1.18
MSH2-205ENST00000467323 TTLL12Q14166 644 aaPredicted RBP7.67□□□□□ -1.18
MSH2-205ENST00000467323 EMILIN3Q9NT22 766 aa7.67□□□□□ -1.18
MSH2-205ENST00000467323 SERPINA10Q9UK55 444 aa7.67□□□□□ -1.18
MSH2-205ENST00000467323 GNPATO15228 680 aa7.66□□□□□ -1.18
MSH2-205ENST00000467323 CCDC97Q96F63 343 aaPredicted RBP7.66□□□□□ -1.18
MSH2-205ENST00000467323 HIC1Q14526 733 aa7.65□□□□□ -1.18
MSH2-205ENST00000467323 PROSER2Q86WR7 435 aaPredicted RBP7.65□□□□□ -1.18
MSH2-205ENST00000467323 FCHSD2O94868 740 aa7.64□□□□□ -1.19
MSH2-205ENST00000467323 MCM6Q14566 821 aa7.64□□□□□ -1.19
MSH2-205ENST00000467323 GRXCR2A6NFK2 248 aa7.63□□□□□ -1.19
MSH2-205ENST00000467323 RAD21O60216 631 aa7.63□□□□□ -1.19
MSH2-205ENST00000467323 DSG2Q14126 1118 aa7.61□□□□□ -1.19
MSH2-205ENST00000467323 SH3D19Q5HYK7 790 aa7.61□□□□□ -1.19
MSH2-205ENST00000467323 GIGYF2Q6Y7W6 1299 aaKnown RBP7.61□□□□□ -1.19
MSH2-205ENST00000467323 ZNF777Q9ULD5 760 aaPredicted RBP7.61□□□□□ -1.19
MSH2-205ENST00000467323 TMC2Q8TDI7 906 aa7.6□□□□□ -1.19
MSH2-205ENST00000467323 TMEM106CQ9BVX2 250 aa7.6□□□□□ -1.19
MSH2-205ENST00000467323 PRKAR2AP13861 404 aaKnown RBP7.59□□□□□ -1.19
MSH2-205ENST00000467323 FOXK1P85037 733 aa7.59□□□□□ -1.19
MSH2-205ENST00000467323 AEBP1Q8IUX7 1158 aa7.59□□□□□ -1.19
MSH2-205ENST00000467323 MS4A1P11836 297 aa7.58□□□□□ -1.2
MSH2-205ENST00000467323 MAP3K9P80192 1104 aa7.58□□□□□ -1.2
MSH2-205ENST00000467323 OSBPP22059 807 aa7.57□□□□□ -1.2
MSH2-205ENST00000467323 FNBP4Q8N3X1 1017 aaPredicted RBP7.57□□□□□ -1.2
MSH2-205ENST00000467323 FECHP22830 423 aa7.56□□□□□ -1.2
MSH2-205ENST00000467323 SKIV2LQ15477 1246 aaKnown RBP7.56□□□□□ -1.2
MSH2-205ENST00000467323 TMCO4Q5TGY1 634 aa7.55□□□□□ -1.2
MSH2-205ENST00000467323 POTEDQ86YR6 584 aa7.55□□□□□ -1.2
MSH2-205ENST00000467323 CLCN1P35523 988 aa7.54□□□□□ -1.2
MSH2-205ENST00000467323 PTGER2P43116 358 aa7.54□□□□□ -1.2
MSH2-205ENST00000467323 PDE4CQ08493 712 aa7.54□□□□□ -1.2
MSH2-205ENST00000467323 PLPP6Q8IY26 295 aa7.54□□□□□ -1.2
MSH2-205ENST00000467323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.54□□□□□ -1.2
MSH2-205ENST00000467323 ATP1B4Q9UN42 357 aaPredicted RBP7.54□□□□□ -1.2
MSH2-205ENST00000467323 SPDYE5A6NIY4 337 aa7.53□□□□□ -1.2
MSH2-205ENST00000467323 ILDR1Q86SU0 546 aaPredicted RBP7.53□□□□□ -1.2
MSH2-205ENST00000467323 PTGDRQ13258 359 aa7.52□□□□□ -1.21
MSH2-205ENST00000467323 POM121Q96HA1 1249 aa7.52□□□□□ -1.21
MSH2-205ENST00000467323 PLSCR2Q9NRY7 297 aa7.52□□□□□ -1.21
MSH2-205ENST00000467323 PATL2C9JE40 543 aaKnown RBP7.51□□□□□ -1.21
MSH2-205ENST00000467323 PPP1R15AO75807 674 aaPredicted RBP7.51□□□□□ -1.21
MSH2-205ENST00000467323 RETREG2Q8NC44 543 aa7.51□□□□□ -1.21
MSH2-205ENST00000467323 RGS22Q8NE09 1264 aa7.51□□□□□ -1.21
MSH2-205ENST00000467323 OXER1Q8TDS5 423 aa7.51□□□□□ -1.21
MSH2-205ENST00000467323 GPCPD1Q9NPB8 672 aa7.51□□□□□ -1.21
MSH2-205ENST00000467323 ZRANB1Q9UGI0 708 aa7.51□□□□□ -1.21
MSH2-205ENST00000467323 MICALL2Q8IY33 904 aa7.5□□□□□ -1.21
MSH2-205ENST00000467323 REPIN1Q9BWE0 567 aaKnown RBP7.5□□□□□ -1.21
MSH2-205ENST00000467323 ZNF330Q9Y3S2 320 aaPredicted RBP7.5□□□□□ -1.21
MSH2-205ENST00000467323 WWC1Q8IX03 1113 aa7.49□□□□□ -1.21
MSH2-205ENST00000467323 DDX12PQ92771 950 aa7.49□□□□□ -1.21
MSH2-205ENST00000467323 TMUB1Q9BVT8 246 aa7.49□□□□□ -1.21
MSH2-205ENST00000467323 GZF1Q9H116 711 aaPredicted RBP7.49□□□□□ -1.21
MSH2-205ENST00000467323 COG6Q9Y2V7 657 aa7.49□□□□□ -1.21
MSH2-205ENST00000467323 ACIN1Q9UKV3 1341 aaKnown RBP7.49□□□□□ -1.21
MSH2-205ENST00000467323 TBC1D12O60347 775 aa7.48□□□□□ -1.21
MSH2-205ENST00000467323 SSTR3P32745 418 aaPredicted RBP7.48□□□□□ -1.21
MSH2-205ENST00000467323 FXR2P51116 673 aaKnown RBP eCLIP7.48□□□□□ -1.21
MSH2-205ENST00000467323 MFAP1P55081 439 aaKnown RBP7.48□□□□□ -1.21
MSH2-205ENST00000467323 BANK1Q8NDB2 785 aa7.48□□□□□ -1.21
MSH2-205ENST00000467323 MTMR7Q9Y216 660 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms