RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.66□□□□□ -1.02
VPS13A-209ENST00000467124 MICALL2Q8IY33 904 aa8.66□□□□□ -1.02
VPS13A-209ENST00000467124 G3V3G9 751 aa8.65□□□□□ -1.02
VPS13A-209ENST00000467124 PLCG2P16885 1265 aa8.65□□□□□ -1.02
VPS13A-209ENST00000467124 TMEM121BQ9BXQ6 578 aaPredicted RBP8.65□□□□□ -1.02
VPS13A-209ENST00000467124 GABBR2O75899 941 aa8.64□□□□□ -1.03
VPS13A-209ENST00000467124 PPP1R15BQ5SWA1 713 aa8.64□□□□□ -1.03
VPS13A-209ENST00000467124 SEMA3EO15041 775 aa8.63□□□□□ -1.03
VPS13A-209ENST00000467124 L3MBTL3Q96JM7 780 aaPredicted RBP8.63□□□□□ -1.03
VPS13A-209ENST00000467124 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
VPS13A-209ENST00000467124 TMC2Q8TDI7 906 aa8.62□□□□□ -1.03
VPS13A-209ENST00000467124 DCBLD2Q96PD2 775 aa8.62□□□□□ -1.03
VPS13A-209ENST00000467124 SLC39A7Q92504 469 aa8.61□□□□□ -1.03
VPS13A-209ENST00000467124 TESPA1A2RU30 521 aaPredicted RBP8.6□□□□□ -1.03
VPS13A-209ENST00000467124 FOXK1P85037 733 aa8.6□□□□□ -1.03
VPS13A-209ENST00000467124 SMYD5Q6GMV2 418 aa8.6□□□□□ -1.03
VPS13A-209ENST00000467124 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
VPS13A-209ENST00000467124 C7P10643 843 aa8.58□□□□□ -1.04
VPS13A-209ENST00000467124 SEC24BO95487 1268 aa8.57□□□□□ -1.04
VPS13A-209ENST00000467124 KIF3CO14782 793 aa8.56□□□□□ -1.04
VPS13A-209ENST00000467124 SPDYE16A6NNV3 312 aaPredicted RBP8.55□□□□□ -1.04
VPS13A-209ENST00000467124 DSG2Q14126 1118 aa8.55□□□□□ -1.04
VPS13A-209ENST00000467124 ZC3H15Q8WU90 426 aaKnown RBP8.55□□□□□ -1.04
VPS13A-209ENST00000467124 TIMELESSQ9UNS1 1208 aa8.54□□□□□ -1.04
VPS13A-209ENST00000467124 PDIA6Q15084 440 aa8.53□□□□□ -1.04
VPS13A-209ENST00000467124 GTF3C3Q9Y5Q9 886 aa8.53□□□□□ -1.04
VPS13A-209ENST00000467124 C2orf72A6NCS6 295 aa8.52□□□□□ -1.05
VPS13A-209ENST00000467124 SLC24A3Q9HC58 644 aa8.51□□□□□ -1.05
VPS13A-209ENST00000467124 METRNQ9UJH8 293 aa8.51□□□□□ -1.05
VPS13A-209ENST00000467124 PLPP6Q8IY26 295 aa8.5□□□□□ -1.05
VPS13A-209ENST00000467124 PELP1Q8IZL8 1130 aaKnown RBP8.5□□□□□ -1.05
VPS13A-209ENST00000467124 EMILIN3Q9NT22 766 aa8.5□□□□□ -1.05
VPS13A-209ENST00000467124 COLQQ9Y215 455 aaPredicted RBP8.5□□□□□ -1.05
VPS13A-209ENST00000467124 C3orf67Q6ZVT6 689 aa8.49□□□□□ -1.05
VPS13A-209ENST00000467124 DPYSL4O14531 572 aa8.48□□□□□ -1.05
VPS13A-209ENST00000467124 BRPF1P55201 1214 aaPredicted RBP8.48□□□□□ -1.05
VPS13A-209ENST00000467124 MLLT3P42568 568 aaPredicted RBP8.47□□□□□ -1.05
VPS13A-209ENST00000467124 NEUROD2Q15784 382 aa8.47□□□□□ -1.05
VPS13A-209ENST00000467124 TMEM132AQ24JP5 1023 aa8.46□□□□□ -1.06
VPS13A-209ENST00000467124 RBM26Q5T8P6 1007 aaKnown RBP8.46□□□□□ -1.06
VPS13A-209ENST00000467124 ZNF316A6NFI3 1004 aaPredicted RBP8.45□□□□□ -1.06
VPS13A-209ENST00000467124 LHX8Q68G74 356 aa8.45□□□□□ -1.06
VPS13A-209ENST00000467124 POTEFA5A3E0 1075 aa8.44□□□□□ -1.06
VPS13A-209ENST00000467124 POTEIP0CG38 1075 aa8.43□□□□□ -1.06
VPS13A-209ENST00000467124 TMEM92Q6UXU6 159 aa8.43□□□□□ -1.06
VPS13A-209ENST00000467124 OXER1Q8TDS5 423 aa8.43□□□□□ -1.06
VPS13A-209ENST00000467124 MAP3K9P80192 1104 aa8.42□□□□□ -1.06
VPS13A-209ENST00000467124 ZMYND10O75800 440 aa8.41□□□□□ -1.06
VPS13A-209ENST00000467124 SLC34A2O95436 690 aa8.41□□□□□ -1.06
VPS13A-209ENST00000467124 GPIHBP1Q8IV16 184 aa8.41□□□□□ -1.06
VPS13A-209ENST00000467124 TBC1D12O60347 775 aa8.4□□□□□ -1.06
VPS13A-209ENST00000467124 PTGER2P43116 358 aa8.39□□□□□ -1.07
VPS13A-209ENST00000467124 PTCD2Q8WV60 388 aaKnown RBP8.39□□□□□ -1.07
VPS13A-209ENST00000467124 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.39□□□□□ -1.07
VPS13A-209ENST00000467124 BARGINQ6ZT62 677 aa8.37□□□□□ -1.07
VPS13A-209ENST00000467124 KRI1Q8N9T8 703 aaKnown RBP8.36□□□□□ -1.07
VPS13A-209ENST00000467124 UPF1Q92900 1129 aaKnown RBP eCLIP8.35□□□□□ -1.07
VPS13A-209ENST00000467124 GPBP1L1Q9HC44 474 aaPredicted RBP8.35□□□□□ -1.07
VPS13A-209ENST00000467124 C14orf37Q86TY3 774 aa8.34□□□□□ -1.07
VPS13A-209ENST00000467124 EVI5O60447 810 aa8.33□□□□□ -1.08
VPS13A-209ENST00000467124 GRXCR2A6NFK2 248 aa8.32□□□□□ -1.08
VPS13A-209ENST00000467124 ANO8Q9HCE9 1232 aaPredicted RBP8.31□□□□□ -1.08
VPS13A-209ENST00000467124 GPR37O15354 613 aa8.3□□□□□ -1.08
VPS13A-209ENST00000467124 OSBPP22059 807 aa8.3□□□□□ -1.08
VPS13A-209ENST00000467124 AK7Q96M32 723 aa8.3□□□□□ -1.08
VPS13A-209ENST00000467124 DAXXQ9UER7 740 aaPredicted RBP8.3□□□□□ -1.08
VPS13A-209ENST00000467124 MAMSTRQ6ZN01 415 aa8.29□□□□□ -1.08
VPS13A-209ENST00000467124 EPAS1Q99814 870 aa8.29□□□□□ -1.08
VPS13A-209ENST00000467124 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
VPS13A-209ENST00000467124 FCHSD2O94868 740 aa8.27□□□□□ -1.09
VPS13A-209ENST00000467124 PHF14O94880 888 aa8.27□□□□□ -1.09
VPS13A-209ENST00000467124 HIC1Q14526 733 aa8.27□□□□□ -1.09
VPS13A-209ENST00000467124 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
VPS13A-209ENST00000467124 ZSWIM6Q9HCJ5 1215 aa8.27□□□□□ -1.09
VPS13A-209ENST00000467124 MAP2K5Q13163 448 aa8.26□□□□□ -1.09
VPS13A-209ENST00000467124 DOK7Q18PE1 504 aa8.26□□□□□ -1.09
VPS13A-209ENST00000467124 DDX12PQ92771 950 aa8.26□□□□□ -1.09
VPS13A-209ENST00000467124 SCUBE2Q9NQ36 999 aa8.26□□□□□ -1.09
VPS13A-209ENST00000467124 PCDHGA4Q9Y5G9 962 aa8.26□□□□□ -1.09
VPS13A-209ENST00000467124 RIMBP2O15034 1052 aa8.25□□□□□ -1.09
VPS13A-209ENST00000467124 FBXW7Q969H0 707 aa8.25□□□□□ -1.09
VPS13A-209ENST00000467124 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
VPS13A-209ENST00000467124 TRIM66O15016 1216 aa8.24□□□□□ -1.09
VPS13A-209ENST00000467124 GNPATO15228 680 aa8.24□□□□□ -1.09
VPS13A-209ENST00000467124 EN1Q05925 392 aaPredicted RBP8.24□□□□□ -1.09
VPS13A-209ENST00000467124 JPH4Q96JJ6 628 aa8.24□□□□□ -1.09
VPS13A-209ENST00000467124 PDE4DQ08499 809 aa8.23□□□□□ -1.09
VPS13A-209ENST00000467124 KDM4CQ9H3R0 1056 aa8.23□□□□□ -1.09
VPS13A-209ENST00000467124 KDM4FA0A1W2PPD8 638 aa8.22□□□□□ -1.09
VPS13A-209ENST00000467124 TYW1BQ6NUM6 668 aa8.22□□□□□ -1.09
VPS13A-209ENST00000467124 PTGDRQ13258 359 aa8.21□□□□□ -1.1
VPS13A-209ENST00000467124 SLAIN1Q8ND83 568 aa8.21□□□□□ -1.1
VPS13A-209ENST00000467124 FECHP22830 423 aa8.2□□□□□ -1.1
VPS13A-209ENST00000467124 PRIM1P49642 420 aaKnown RBP8.2□□□□□ -1.1
VPS13A-209ENST00000467124 ERICH6Q7L0X2 663 aa8.2□□□□□ -1.1
VPS13A-209ENST00000467124 SUPT5HO00267 1087 aaKnown RBP8.19□□□□□ -1.1
VPS13A-209ENST00000467124 CERKQ8TCT0 537 aa8.19□□□□□ -1.1
VPS13A-209ENST00000467124 PCDHGA10Q9Y5H3 936 aa8.19□□□□□ -1.1
VPS13A-209ENST00000467124 PSDA5PKW4 1024 aaPredicted RBP8.18□□□□□ -1.1
VPS13A-209ENST00000467124 IRF6O14896 467 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms