RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
SLF1-203ENST00000466957 RIMBP2O15034 1052 aa15.85■□□□□ 0.13
SLF1-203ENST00000466957 EMP3P54852 163 aa15.85■□□□□ 0.13
SLF1-203ENST00000466957 PCDH10Q9P2E7 1040 aa15.85■□□□□ 0.13
SLF1-203ENST00000466957 RYDENQ9NUL5 291 aaKnown RBP15.83■□□□□ 0.12
SLF1-203ENST00000466957 C2orf72A6NCS6 295 aa15.82■□□□□ 0.12
SLF1-203ENST00000466957 CDAN1Q8IWY9 1227 aa15.81■□□□□ 0.12
SLF1-203ENST00000466957 TMC2Q8TDI7 906 aa15.81■□□□□ 0.12
SLF1-203ENST00000466957 PLSCR2Q9NRY7 297 aa15.8■□□□□ 0.12
SLF1-203ENST00000466957 RTN4Q9NQC3 1192 aaKnown RBP15.78■□□□□ 0.12
SLF1-203ENST00000466957 KIF3CO14782 793 aa15.77■□□□□ 0.12
SLF1-203ENST00000466957 FAM205CA6NFA0 338 aa15.75■□□□□ 0.11
SLF1-203ENST00000466957 HOXB1P14653 301 aaPredicted RBP15.75■□□□□ 0.11
SLF1-203ENST00000466957 ZSWIM6Q9HCJ5 1215 aa15.72■□□□□ 0.11
SLF1-203ENST00000466957 HS3ST6Q96QI5 342 aa15.7■□□□□ 0.1
SLF1-203ENST00000466957 GTPBP6O43824 516 aaPredicted RBP15.69■□□□□ 0.1
SLF1-203ENST00000466957 ERBB3P21860 1342 aa15.68■□□□□ 0.1
SLF1-203ENST00000466957 ARSIQ5FYB1 569 aa15.65■□□□□ 0.1
SLF1-203ENST00000466957 GPR153Q6NV75 609 aa15.65■□□□□ 0.1
SLF1-203ENST00000466957 POTEB3A0JP26 581 aa15.62■□□□□ 0.09
SLF1-203ENST00000466957 POTEBQ6S5H4 581 aa15.62■□□□□ 0.09
SLF1-203ENST00000466957 GPHNQ9NQX3 736 aaPredicted RBP15.62■□□□□ 0.09
SLF1-203ENST00000466957 KHSRPQ92945 711 aaKnown RBP eCLIP15.61■□□□□ 0.092e-6■■■□□ 17.6
SLF1-203ENST00000466957 FOXK1P85037 733 aa15.58■□□□□ 0.08
SLF1-203ENST00000466957 VARS2Q5ST30 1063 aaKnown RBP15.58■□□□□ 0.08
SLF1-203ENST00000466957 PLPP6Q8IY26 295 aa15.58■□□□□ 0.08
SLF1-203ENST00000466957 DSG2Q14126 1118 aa15.56■□□□□ 0.08
SLF1-203ENST00000466957 BBXQ8WY36 941 aaPredicted RBP15.55■□□□□ 0.08
SLF1-203ENST00000466957 PCDHGA4Q9Y5G9 962 aa15.55■□□□□ 0.08
SLF1-203ENST00000466957 SLC34A2O95436 690 aa15.54■□□□□ 0.08
SLF1-203ENST00000466957 NUDT7P0C024 238 aa15.53■□□□□ 0.08
SLF1-203ENST00000466957 CRISPLD2Q9H0B8 497 aa15.51■□□□□ 0.07
SLF1-203ENST00000466957 PDE4AP27815 886 aa15.49■□□□□ 0.07
SLF1-203ENST00000466957 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
SLF1-203ENST00000466957 ZNF316A6NFI3 1004 aaPredicted RBP15.48■□□□□ 0.07
SLF1-203ENST00000466957 PPP1R15BQ5SWA1 713 aa15.47■□□□□ 0.07
SLF1-203ENST00000466957 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.47■□□□□ 0.07
SLF1-203ENST00000466957 KRTAP3-3Q9BYR6 98 aa15.46■□□□□ 0.07
SLF1-203ENST00000466957 KRTAP3-2Q9BYR7 98 aa15.46■□□□□ 0.07
SLF1-203ENST00000466957 PTCD2Q8WV60 388 aaKnown RBP15.44■□□□□ 0.06
SLF1-203ENST00000466957 LARP6Q9BRS8 491 aaKnown RBP15.44■□□□□ 0.06
SLF1-203ENST00000466957 ZNF687Q8N1G0 1237 aa15.42■□□□□ 0.06
SLF1-203ENST00000466957 LHX6Q9UPM6 363 aa15.42■□□□□ 0.06
SLF1-203ENST00000466957 TBC1D12O60347 775 aa15.41■□□□□ 0.06
SLF1-203ENST00000466957 UPF1Q92900 1129 aaKnown RBP eCLIP15.41■□□□□ 0.06
SLF1-203ENST00000466957 SPRYD3Q8NCJ5 442 aa15.4■□□□□ 0.06
SLF1-203ENST00000466957 DDX27Q96GQ7 796 aaKnown RBP15.4■□□□□ 0.06
SLF1-203ENST00000466957 CADPS2Q86UW7 1296 aa15.39■□□□□ 0.05
SLF1-203ENST00000466957 SPNS2Q8IVW8 549 aa15.38■□□□□ 0.05
SLF1-203ENST00000466957 CFAP44Q96MT7 982 aa15.36■□□□□ 0.05
SLF1-203ENST00000466957 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
SLF1-203ENST00000466957 OXER1Q8TDS5 423 aa15.32■□□□□ 0.04
SLF1-203ENST00000466957 MFSD10Q14728 455 aa15.31■□□□□ 0.04
SLF1-203ENST00000466957 MMRN1Q13201 1228 aa15.29■□□□□ 0.04
SLF1-203ENST00000466957 KDM4FA0A1W2PPD8 638 aa15.28■□□□□ 0.04
SLF1-203ENST00000466957 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
SLF1-203ENST00000466957 ANKRD13DQ6ZTN6 518 aa15.23■□□□□ 0.03
SLF1-203ENST00000466957 PBX2P40425 430 aa15.22■□□□□ 0.03
SLF1-203ENST00000466957 PPP4R3BQ5MIZ7 849 aa15.22■□□□□ 0.03
SLF1-203ENST00000466957 AXIN2Q9Y2T1 843 aa15.22■□□□□ 0.03
SLF1-203ENST00000466957 MAP3K9P80192 1104 aa15.21■□□□□ 0.03
SLF1-203ENST00000466957 LSM11P83369 360 aaKnown RBP eCLIP15.19■□□□□ 0.02
SLF1-203ENST00000466957 EMILIN3Q9NT22 766 aa15.19■□□□□ 0.02
SLF1-203ENST00000466957 EVI5O60447 810 aa15.18■□□□□ 0.02
SLF1-203ENST00000466957 POTEEQ6S8J3 1075 aa15.18■□□□□ 0.02
SLF1-203ENST00000466957 ZNF454Q8N9F8 522 aa15.16■□□□□ 0.02
SLF1-203ENST00000466957 ARHGAP33O14559 1287 aa15.14■□□□□ 0.01
SLF1-203ENST00000466957 PSEN2P49810 448 aa15.1■□□□□ 0.01
SLF1-203ENST00000466957 KCNH8Q96L42 1107 aa15.1■□□□□ 0.01
SLF1-203ENST00000466957 CAMK2BQ13554 666 aa15.09■□□□□ 0.01
SLF1-203ENST00000466957 MYT1LQ9UL68 1186 aa15.09■□□□□ 0.01
SLF1-203ENST00000466957 KCNK17Q96T54 332 aa15.08■□□□□ 0
SLF1-203ENST00000466957 ANO8Q9HCE9 1232 aaPredicted RBP15.08■□□□□ 0
SLF1-203ENST00000466957 DPYSL4O14531 572 aa15.07■□□□□ 0
SLF1-203ENST00000466957 PTGER2P43116 358 aa15.07■□□□□ 0
SLF1-203ENST00000466957 RNF166Q96A37 237 aaPredicted RBP15.07■□□□□ 0
SLF1-203ENST00000466957 WDR70Q9NW82 654 aa15.07■□□□□ 0
SLF1-203ENST00000466957 FOSBP53539 338 aa15.06■□□□□ 0
SLF1-203ENST00000466957 DMRTA1Q5VZB9 504 aa15.05■□□□□ -0
SLF1-203ENST00000466957 JPH4Q96JJ6 628 aa15.05■□□□□ -0
SLF1-203ENST00000466957 ADGRD1Q6QNK2 874 aa15.02■□□□□ -0
SLF1-203ENST00000466957 ZDHHC16Q969W1 377 aa15.01□□□□□ -0.01
SLF1-203ENST00000466957 BCL2L12Q9HB09 334 aa15.01□□□□□ -0.01
SLF1-203ENST00000466957 PTPREP23469 700 aa14.98□□□□□ -0.01
SLF1-203ENST00000466957 E2F4Q16254 413 aa14.98□□□□□ -0.01
SLF1-203ENST00000466957 ADAM33Q9BZ11 813 aa14.96□□□□□ -0.01
SLF1-203ENST00000466957 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.01
SLF1-203ENST00000466957 TK2O00142 265 aa14.95□□□□□ -0.02
SLF1-203ENST00000466957 PCDHGA10Q9Y5H3 936 aa14.95□□□□□ -0.02
SLF1-203ENST00000466957 PHF14O94880 888 aa14.92□□□□□ -0.02
SLF1-203ENST00000466957 STAC3Q96MF2 364 aa14.92□□□□□ -0.02
SLF1-203ENST00000466957 TYW1BQ6NUM6 668 aa14.91□□□□□ -0.02
SLF1-203ENST00000466957 DDX12PQ92771 950 aa14.9□□□□□ -0.02
SLF1-203ENST00000466957 FBXW7Q969H0 707 aa14.89□□□□□ -0.03
SLF1-203ENST00000466957 PDIA6Q15084 440 aa14.88□□□□□ -0.03
SLF1-203ENST00000466957 VPS9D1Q9Y2B5 631 aa14.88□□□□□ -0.03
SLF1-203ENST00000466957 HRO43593 1189 aa14.87□□□□□ -0.03
SLF1-203ENST00000466957 EPAS1Q99814 870 aa14.86□□□□□ -0.03
SLF1-203ENST00000466957 SPDYE16A6NNV3 312 aaPredicted RBP14.84□□□□□ -0.03
SLF1-203ENST00000466957 RBM33Q96EV2 1170 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms