RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-213ENST00000466707 RIMS1Q86UR5 1692 aaKnown RBP41.81■■■■■ 4.28
ABCA2-213ENST00000466707 SCAPERQ9BY12 1400 aa41.81■■■■■ 4.28
ABCA2-213ENST00000466707 TROQ12816 1431 aaPredicted RBP41.8■■■■■ 4.28
ABCA2-213ENST00000466707 PCF11O94913 1555 aaKnown RBP41.79■■■■■ 4.28
ABCA2-213ENST00000466707 CDK11AQ9UQ88 783 aaPredicted RBP41.77■■■■■ 4.28
ABCA2-213ENST00000466707 MAGI2Q86UL8 1455 aa41.77■■■■■ 4.28
ABCA2-213ENST00000466707 ILDR1Q86SU0 546 aaPredicted RBP41.74■■■■■ 4.27
ABCA2-213ENST00000466707 CLIP1P30622 1438 aa41.69■■■■■ 4.26
ABCA2-213ENST00000466707 EFCAB2Q5VUJ9 269 aa41.68■■■■■ 4.26
ABCA2-213ENST00000466707 ARHGAP5Q13017 1502 aa41.67■■■■■ 4.26
ABCA2-213ENST00000466707 CASKIN1Q8WXD9 1431 aa41.67■■■■■ 4.26
ABCA2-213ENST00000466707 CDC42BPBQ9Y5S2 1711 aa41.64■■■■■ 4.26
ABCA2-213ENST00000466707 CCDC18Q5T9S5 1454 aa41.61■■■■■ 4.25
ABCA2-213ENST00000466707 LMTK3Q96Q04 1460 aa41.6■■■■■ 4.25
ABCA2-213ENST00000466707 FER1L4A9Z1Z3 1794 aa41.58■■■■■ 4.25
ABCA2-213ENST00000466707 KDM5CP41229 1560 aa41.58■■■■■ 4.25
ABCA2-213ENST00000466707 PREX2Q70Z35 1606 aa41.58■■■■■ 4.25
ABCA2-213ENST00000466707 ATP10AO60312 1499 aa41.56■■■■■ 4.24
ABCA2-213ENST00000466707 ZNF518AQ6AHZ1 1483 aa41.56■■■■■ 4.24
ABCA2-213ENST00000466707 C9orf84Q5VXU9 1444 aa41.53■■■■■ 4.24
ABCA2-213ENST00000466707 FYCO1Q9BQS8 1478 aa41.53■■■■■ 4.24
ABCA2-213ENST00000466707 MLECQ14165 292 aa41.52■■■■■ 4.24
ABCA2-213ENST00000466707 ARHGEF12Q9NZN5 1544 aa41.48■■■■■ 4.23
ABCA2-213ENST00000466707 CDC42BPAQ5VT25 1732 aa41.47■■■■■ 4.23
ABCA2-213ENST00000466707 AFAP1Q8N556 730 aa41.47■■■■■ 4.23
ABCA2-213ENST00000466707 ABCC1P33527 1531 aa41.46■■■■■ 4.23
ABCA2-213ENST00000466707 PLPPR3Q6T4P5 718 aa41.46■■■■■ 4.23
ABCA2-213ENST00000466707 DIP2CQ9Y2E4 1556 aa41.45■■■■■ 4.23
ABCA2-213ENST00000466707 ITSN2Q9NZM3 1697 aa41.43■■■■■ 4.22
ABCA2-213ENST00000466707 ABCA6Q8N139 1617 aa41.4■■■■■ 4.22
ABCA2-213ENST00000466707 TRAPPC8Q9Y2L5 1435 aa41.37■■■■■ 4.21
ABCA2-213ENST00000466707 MLH3Q9UHC1 1453 aa41.34■■■■■ 4.21
ABCA2-213ENST00000466707 REREQ9P2R6 1566 aa41.33■■■■■ 4.21
ABCA2-213ENST00000466707 HSPA2P54652 639 aa41.31■■■■■ 4.2
ABCA2-213ENST00000466707 MYT1LQ9UL68 1186 aa41.28■■■■■ 4.2
ABCA2-213ENST00000466707 SAMD9LQ8IVG5 1584 aa41.27■■■■■ 4.2
ABCA2-213ENST00000466707 KIDINS220Q9ULH0 1771 aa41.27■■■■■ 4.2
ABCA2-213ENST00000466707 GPATCH8Q9UKJ3 1502 aaKnown RBP41.23■■■■■ 4.19
ABCA2-213ENST00000466707 PREX1Q8TCU6 1659 aa41.21■■■■■ 4.19
ABCA2-213ENST00000466707 SYCP2Q9BX26 1530 aa41.19■■■■■ 4.18
ABCA2-213ENST00000466707 CEBPAP49715 358 aaPredicted RBP41.19■■■■■ 4.18
ABCA2-213ENST00000466707 AGLP35573 1532 aa41.18■■■■■ 4.18
ABCA2-213ENST00000466707 ZNF777Q9ULD5 760 aaPredicted RBP41.14■■■■■ 4.18
ABCA2-213ENST00000466707 C3P01024 1663 aa41.1■■■■■ 4.17
ABCA2-213ENST00000466707 FBXO41Q8TF61 875 aa41.09■■■■■ 4.17
ABCA2-213ENST00000466707 MTUS2Q5JR59 1369 aa41.06■■■■■ 4.16
ABCA2-213ENST00000466707 CEP162Q5TB80 1403 aa41.04■■■■■ 4.16
ABCA2-213ENST00000466707 CCNB3Q8WWL7 1395 aa41.03■■■■■ 4.16
ABCA2-213ENST00000466707 HNRNPMP52272 730 aaKnown RBP eCLIP41.03■■■■■ 4.16
ABCA2-213ENST00000466707 TIAM1Q13009 1591 aa41.02■■■■■ 4.16
ABCA2-213ENST00000466707 INO80Q9ULG1 1556 aaPredicted RBP41.01■■■■■ 4.16
ABCA2-213ENST00000466707 ATP7AQ04656 1500 aa41■■■■■ 4.15
ABCA2-213ENST00000466707 EHBP1L1Q8N3D4 1523 aa41■■■■■ 4.15
ABCA2-213ENST00000466707 CFDP1Q9UEE9 299 aaPredicted RBP40.99■■■■■ 4.15
ABCA2-213ENST00000466707 KIAA1107Q9UPP5 1409 aa40.99■■■■■ 4.15
ABCA2-213ENST00000466707 PLEKHH2Q8IVE3 1493 aa40.98■■■■■ 4.15
ABCA2-213ENST00000466707 SETD1BQ9UPS6 1966 aaKnown RBP40.97■■■■■ 4.15
ABCA2-213ENST00000466707 SPAG9O60271 1321 aaKnown RBP40.97■■■■■ 4.15
ABCA2-213ENST00000466707 SUPT6HQ7KZ85 1726 aaKnown RBP40.96■■■■■ 4.15
ABCA2-213ENST00000466707 UHRF1BP1Q6BDS2 1440 aa40.96■■■■■ 4.15
ABCA2-213ENST00000466707 STRCQ7RTU9 1775 aa40.94■■■■■ 4.14
ABCA2-213ENST00000466707 PLXNC1O60486 1568 aa40.91■■■■■ 4.14
ABCA2-213ENST00000466707 CNTLNQ9NXG0 1405 aa40.87■■■■■ 4.13
ABCA2-213ENST00000466707 ESF1Q9H501 851 aaKnown RBP40.87■■■■■ 4.13
ABCA2-213ENST00000466707 MROH2AA6NES4 1674 aa40.87■■■■■ 4.13
ABCA2-213ENST00000466707 ZNF644Q9H582 1327 aaPredicted RBP40.86■■■■■ 4.13
ABCA2-213ENST00000466707 A2MP01023 1474 aa40.83■■■■■ 4.13
ABCA2-213ENST00000466707 MBD5Q9P267 1494 aa40.81■■■■■ 4.12
ABCA2-213ENST00000466707 ADGBQ8N7X0 1667 aa40.79■■■■■ 4.12
ABCA2-213ENST00000466707 CLTCQ00610 1675 aaKnown RBP40.78■■■■■ 4.12
ABCA2-213ENST00000466707 NCOA2Q15596 1464 aa40.74■■■■■ 4.11
ABCA2-213ENST00000466707 CERKQ8TCT0 537 aa40.73■■■■■ 4.11
ABCA2-213ENST00000466707 ZMYM3Q14202 1370 aa40.7■■■■■ 4.11
ABCA2-213ENST00000466707 NPATQ14207 1427 aa40.69■■■■■ 4.1
ABCA2-213ENST00000466707 CAMSAP2Q08AD1 1489 aa40.66■■■■■ 4.1
ABCA2-213ENST00000466707 RTEL1-TNFRSF6BF6WH68 1400 aa40.64■■■■■ 4.1
ABCA2-213ENST00000466707 LOC105371045A0A1W2PR82 267 aa40.63■■■■■ 4.09
ABCA2-213ENST00000466707 DMRT2Q9Y5R5 561 aa40.63■■■■■ 4.09
ABCA2-213ENST00000466707 GGT6Q6P531 493 aa40.61■■■■■ 4.09
ABCA2-213ENST00000466707 PTPRTO14522 1441 aa40.6■■■■■ 4.09
ABCA2-213ENST00000466707 NCOA1Q15788 1441 aa40.6■■■■■ 4.09
ABCA2-213ENST00000466707 VPS8Q8N3P4 1428 aa40.6■■■■■ 4.09
ABCA2-213ENST00000466707 CCDC141Q6ZP82 1450 aa40.6■■■■■ 4.09
ABCA2-213ENST00000466707 MYO3AQ8NEV4 1616 aa40.6■■■■■ 4.09
ABCA2-213ENST00000466707 CAMSAP1Q5T5Y3 1602 aa40.56■■■■■ 4.08
ABCA2-213ENST00000466707 ZNF142P52746 1687 aaPredicted RBP40.56■■■■■ 4.08
ABCA2-213ENST00000466707 PTPRKQ15262 1439 aa40.56■■■■■ 4.08
ABCA2-213ENST00000466707 LRRC9Q6ZRR7 1453 aa40.53■■■■■ 4.08
ABCA2-213ENST00000466707 DHX29Q7Z478 1369 aaKnown RBP40.53■■■■■ 4.08
ABCA2-213ENST00000466707 ARHGEF5Q12774 1597 aa40.5■■■■■ 4.07
ABCA2-213ENST00000466707 CEP170BQ9Y4F5 1589 aaPredicted RBP40.48■■■■■ 4.07
ABCA2-213ENST00000466707 PPP6R1Q9UPN7 881 aa40.45■■■■■ 4.07
ABCA2-213ENST00000466707 LTBP4Q8N2S1 1624 aa40.45■■■■■ 4.07
ABCA2-213ENST00000466707 MAP3K1Q13233 1512 aa40.38■■■■■ 4.06
ABCA2-213ENST00000466707 KIF3BO15066 747 aa40.38■■■■■ 4.05
ABCA2-213ENST00000466707 RSPH4AQ5TD94 716 aa40.38■■■■■ 4.05
ABCA2-213ENST00000466707 KANK4Q5T7N3 995 aaPredicted RBP40.37■■■■■ 4.05
ABCA2-213ENST00000466707 KDM5DQ9BY66 1539 aa40.37■■■■■ 4.05
ABCA2-213ENST00000466707 PLA2R1Q13018 1463 aa40.36■■■■■ 4.05
ABCA2-213ENST00000466707 NCKAP5LQ9HCH0 1330 aa40.36■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms