RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 TMEM92Q6UXU6 159 aa10.45□□□□□ -0.74
EDEM3-205ENST00000466606 LARP6Q9BRS8 491 aaKnown RBP10.44□□□□□ -0.74
EDEM3-205ENST00000466606 PDE4AP27815 886 aa10.42□□□□□ -0.74
EDEM3-205ENST00000466606 CRISPLD2Q9H0B8 497 aa10.42□□□□□ -0.74
EDEM3-205ENST00000466606 C2orf72A6NCS6 295 aa10.41□□□□□ -0.74
EDEM3-205ENST00000466606 LHX8Q68G74 356 aa10.41□□□□□ -0.74
EDEM3-205ENST00000466606 TMC2Q8TDI7 906 aa10.41□□□□□ -0.74
EDEM3-205ENST00000466606 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.41□□□□□ -0.74
EDEM3-205ENST00000466606 GPHNQ9NQX3 736 aaPredicted RBP10.39□□□□□ -0.75
EDEM3-205ENST00000466606 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
EDEM3-205ENST00000466606 KIF3CO14782 793 aa10.36□□□□□ -0.75
EDEM3-205ENST00000466606 DSG2Q14126 1118 aa10.36□□□□□ -0.75
EDEM3-205ENST00000466606 DDX27Q96GQ7 796 aaKnown RBP10.36□□□□□ -0.75
EDEM3-205ENST00000466606 SCUBE2Q9NQ36 999 aa10.36□□□□□ -0.75
EDEM3-205ENST00000466606 PPP1R15BQ5SWA1 713 aa10.35□□□□□ -0.75
EDEM3-205ENST00000466606 MFSD10Q14728 455 aa10.34□□□□□ -0.75
EDEM3-205ENST00000466606 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
EDEM3-205ENST00000466606 SLAIN1Q8ND83 568 aa10.34□□□□□ -0.75
EDEM3-205ENST00000466606 OTUD5Q96G74 571 aa10.33□□□□□ -0.76
EDEM3-205ENST00000466606 PLPP6Q8IY26 295 aa10.32□□□□□ -0.76
EDEM3-205ENST00000466606 FOXK1P85037 733 aa10.31□□□□□ -0.76
EDEM3-205ENST00000466606 E2F4Q16254 413 aa10.28□□□□□ -0.76
EDEM3-205ENST00000466606 KCNV2Q8TDN2 545 aa10.27□□□□□ -0.77
EDEM3-205ENST00000466606 UPF1Q92900 1129 aaKnown RBP eCLIP10.23□□□□□ -0.77
EDEM3-205ENST00000466606 EMILIN3Q9NT22 766 aa10.23□□□□□ -0.77
EDEM3-205ENST00000466606 CAMK2BQ13554 666 aa10.22□□□□□ -0.77
EDEM3-205ENST00000466606 P3H3Q8IVL6 736 aa10.19□□□□□ -0.78
EDEM3-205ENST00000466606 DPYSL4O14531 572 aa10.18□□□□□ -0.78
EDEM3-205ENST00000466606 HOXB3P14651 431 aaPredicted RBP10.18□□□□□ -0.78
EDEM3-205ENST00000466606 OXER1Q8TDS5 423 aa10.15□□□□□ -0.78
EDEM3-205ENST00000466606 MAP3K9P80192 1104 aa10.14□□□□□ -0.79
EDEM3-205ENST00000466606 DOK7Q18PE1 504 aa10.14□□□□□ -0.79
EDEM3-205ENST00000466606 ARHGEF1Q92888 912 aaKnown RBP10.14□□□□□ -0.79
EDEM3-205ENST00000466606 KHSRPQ92945 711 aaKnown RBP eCLIP10.13□□□□□ -0.79
EDEM3-205ENST00000466606 PCDHGA4Q9Y5G9 962 aa10.13□□□□□ -0.79
EDEM3-205ENST00000466606 SLC34A2O95436 690 aa10.12□□□□□ -0.79
EDEM3-205ENST00000466606 ZNF710Q8N1W2 664 aa10.12□□□□□ -0.79
EDEM3-205ENST00000466606 PTCD2Q8WV60 388 aaKnown RBP10.12□□□□□ -0.79
EDEM3-205ENST00000466606 ARSIQ5FYB1 569 aa10.11□□□□□ -0.79
EDEM3-205ENST00000466606 SNPHO15079 494 aa10.1□□□□□ -0.79
EDEM3-205ENST00000466606 NBR1Q14596 966 aa10.1□□□□□ -0.79
EDEM3-205ENST00000466606 TBC1D12O60347 775 aa10.09□□□□□ -0.79
EDEM3-205ENST00000466606 ARIH1Q9Y4X5 557 aaPredicted RBP10.09□□□□□ -0.79
EDEM3-205ENST00000466606 RIMBP2O15034 1052 aa10.08□□□□□ -0.8
EDEM3-205ENST00000466606 SEMA3EO15041 775 aa10.08□□□□□ -0.8
EDEM3-205ENST00000466606 EVI5O60447 810 aa10.07□□□□□ -0.8
EDEM3-205ENST00000466606 NUDT7P0C024 238 aa10.07□□□□□ -0.8
EDEM3-205ENST00000466606 GPR153Q6NV75 609 aa10.07□□□□□ -0.8
EDEM3-205ENST00000466606 BCANQ96GW7 911 aa10.07□□□□□ -0.8
EDEM3-205ENST00000466606 PDIA6Q15084 440 aa10.06□□□□□ -0.8
EDEM3-205ENST00000466606 FAM163AQ96GL9 167 aaPredicted RBP10.06□□□□□ -0.8
EDEM3-205ENST00000466606 SPDYE16A6NNV3 312 aaPredicted RBP10.03□□□□□ -0.8
EDEM3-205ENST00000466606 ST18O60284 1047 aa10.03□□□□□ -0.8
EDEM3-205ENST00000466606 MLLT3P42568 568 aaPredicted RBP10.03□□□□□ -0.8
EDEM3-205ENST00000466606 ZSWIM6Q9HCJ5 1215 aa10.03□□□□□ -0.8
EDEM3-205ENST00000466606 PLSCR2Q9NRY7 297 aa10.02□□□□□ -0.81
EDEM3-205ENST00000466606 HOXB1P14653 301 aaPredicted RBP10.01□□□□□ -0.81
EDEM3-205ENST00000466606 DDX12PQ92771 950 aa10.01□□□□□ -0.81
EDEM3-205ENST00000466606 KDM4FA0A1W2PPD8 638 aa10□□□□□ -0.81
EDEM3-205ENST00000466606 ZNF316A6NFI3 1004 aaPredicted RBP10□□□□□ -0.81
EDEM3-205ENST00000466606 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
EDEM3-205ENST00000466606 TESPA1A2RU30 521 aaPredicted RBP9.99□□□□□ -0.81
EDEM3-205ENST00000466606 MARVELD3Q96A59 401 aa9.99□□□□□ -0.81
EDEM3-205ENST00000466606 ANO8Q9HCE9 1232 aaPredicted RBP9.98□□□□□ -0.81
EDEM3-205ENST00000466606 LHX6Q9UPM6 363 aa9.98□□□□□ -0.81
EDEM3-205ENST00000466606 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
EDEM3-205ENST00000466606 PTGER2P43116 358 aa9.93□□□□□ -0.82
EDEM3-205ENST00000466606 EMP3P54852 163 aa9.93□□□□□ -0.82
EDEM3-205ENST00000466606 ZNF454Q8N9F8 522 aa9.93□□□□□ -0.82
EDEM3-205ENST00000466606 PRIM1P49642 420 aaKnown RBP9.92□□□□□ -0.82
EDEM3-205ENST00000466606 PCDHGA10Q9Y5H3 936 aa9.92□□□□□ -0.82
EDEM3-205ENST00000466606 RBM26Q5T8P6 1007 aaKnown RBP9.91□□□□□ -0.82
EDEM3-205ENST00000466606 RBM33Q96EV2 1170 aaKnown RBP9.91□□□□□ -0.82
EDEM3-205ENST00000466606 ERBB3P21860 1342 aa9.9□□□□□ -0.82
EDEM3-205ENST00000466606 OSBPP22059 807 aa9.9□□□□□ -0.82
EDEM3-205ENST00000466606 FOSBP53539 338 aa9.9□□□□□ -0.82
EDEM3-205ENST00000466606 SMYD5Q6GMV2 418 aa9.9□□□□□ -0.82
EDEM3-205ENST00000466606 FAM205CA6NFA0 338 aa9.89□□□□□ -0.83
EDEM3-205ENST00000466606 PHF14O94880 888 aa9.89□□□□□ -0.83
EDEM3-205ENST00000466606 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
EDEM3-205ENST00000466606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.89□□□□□ -0.83
EDEM3-205ENST00000466606 JPH4Q96JJ6 628 aa9.89□□□□□ -0.83
EDEM3-205ENST00000466606 LMOD2Q6P5Q4 547 aa9.88□□□□□ -0.83
EDEM3-205ENST00000466606 TULP1O00294 542 aaPredicted RBP9.87□□□□□ -0.83
EDEM3-205ENST00000466606 TYW1BQ6NUM6 668 aa9.86□□□□□ -0.83
EDEM3-205ENST00000466606 EPAS1Q99814 870 aa9.86□□□□□ -0.83
EDEM3-205ENST00000466606 POTEB3A0JP26 581 aa9.85□□□□□ -0.83
EDEM3-205ENST00000466606 PPP4R3BQ5MIZ7 849 aa9.85□□□□□ -0.83
EDEM3-205ENST00000466606 POTEBQ6S5H4 581 aa9.85□□□□□ -0.83
EDEM3-205ENST00000466606 ZDHHC16Q969W1 377 aa9.85□□□□□ -0.83
EDEM3-205ENST00000466606 ADAM33Q9BZ11 813 aa9.85□□□□□ -0.83
EDEM3-205ENST00000466606 MAP3K7O43318 606 aa9.84□□□□□ -0.83
EDEM3-205ENST00000466606 EN1Q05925 392 aaPredicted RBP9.84□□□□□ -0.83
EDEM3-205ENST00000466606 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
EDEM3-205ENST00000466606 HS3ST6Q96QI5 342 aa9.84□□□□□ -0.83
EDEM3-205ENST00000466606 NUTM2FA1L443 756 aa9.83□□□□□ -0.84
EDEM3-205ENST00000466606 PSDA5PKW4 1024 aaPredicted RBP9.82□□□□□ -0.84
EDEM3-205ENST00000466606 CDHR5Q9HBB8 845 aa9.82□□□□□ -0.84
EDEM3-205ENST00000466606 POTEMA6NI47 508 aa9.81□□□□□ -0.84
EDEM3-205ENST00000466606 FBXW7Q969H0 707 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms