RNA–Protein interactions for RNA: ENST00000466560.1

LINC00879-204, long intergenic non-protein coding RNA 879, humanhuman

TSL 5

Gene LINC00879, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-204ENST00000466560 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
LINC00879-204ENST00000466560 ST18O60284 1047 aa11.35□□□□□ -0.59
LINC00879-204ENST00000466560 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
LINC00879-204ENST00000466560 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
LINC00879-204ENST00000466560 CFAP44Q96MT7 982 aa11.32□□□□□ -0.6
LINC00879-204ENST00000466560 HOXB3P14651 431 aaPredicted RBP11.31□□□□□ -0.6
LINC00879-204ENST00000466560 POTEMA6NI47 508 aa11.3□□□□□ -0.6
LINC00879-204ENST00000466560 KIF3CO14782 793 aa11.3□□□□□ -0.6
LINC00879-204ENST00000466560 POTEGQ6S5H5 508 aa11.3□□□□□ -0.6
LINC00879-204ENST00000466560 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
LINC00879-204ENST00000466560 DOK7Q18PE1 504 aa11.29□□□□□ -0.6
LINC00879-204ENST00000466560 HAP1P54257 671 aaPredicted RBP11.28□□□□□ -0.6
LINC00879-204ENST00000466560 SPRYD3Q8NCJ5 442 aa11.28□□□□□ -0.6
LINC00879-204ENST00000466560 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
LINC00879-204ENST00000466560 RIMBP2O15034 1052 aa11.22□□□□□ -0.61
LINC00879-204ENST00000466560 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
LINC00879-204ENST00000466560 GPHNQ9NQX3 736 aaPredicted RBP11.21□□□□□ -0.61
LINC00879-204ENST00000466560 HOXB1P14653 301 aaPredicted RBP11.18□□□□□ -0.62
LINC00879-204ENST00000466560 EMP3P54852 163 aa11.18□□□□□ -0.62
LINC00879-204ENST00000466560 FOXK1P85037 733 aa11.18□□□□□ -0.62
LINC00879-204ENST00000466560 CRISPLD2Q9H0B8 497 aa11.18□□□□□ -0.62
LINC00879-204ENST00000466560 DSG2Q14126 1118 aa11.17□□□□□ -0.62
LINC00879-204ENST00000466560 ZSWIM6Q9HCJ5 1215 aa11.17□□□□□ -0.62
LINC00879-204ENST00000466560 NCKAP5LQ9HCH0 1330 aa11.16□□□□□ -0.62
LINC00879-204ENST00000466560 PLPP6Q8IY26 295 aa11.16□□□□□ -0.62
LINC00879-204ENST00000466560 PDE4AP27815 886 aa11.15□□□□□ -0.62
LINC00879-204ENST00000466560 CADPS2Q86UW7 1296 aa11.15□□□□□ -0.62
LINC00879-204ENST00000466560 ARSIQ5FYB1 569 aa11.13□□□□□ -0.63
LINC00879-204ENST00000466560 GPR153Q6NV75 609 aa11.13□□□□□ -0.63
LINC00879-204ENST00000466560 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
LINC00879-204ENST00000466560 SLC34A2O95436 690 aa11.12□□□□□ -0.63
LINC00879-204ENST00000466560 FAM205CA6NFA0 338 aa11.11□□□□□ -0.63
LINC00879-204ENST00000466560 PPP1R15BQ5SWA1 713 aa11.11□□□□□ -0.63
LINC00879-204ENST00000466560 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.633e-7■■□□□ 12.7
LINC00879-204ENST00000466560 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
LINC00879-204ENST00000466560 PCDHGA4Q9Y5G9 962 aa11.09□□□□□ -0.63
LINC00879-204ENST00000466560 CDAN1Q8IWY9 1227 aa11.08□□□□□ -0.64
LINC00879-204ENST00000466560 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
LINC00879-204ENST00000466560 DDX27Q96GQ7 796 aaKnown RBP11.08□□□□□ -0.64
LINC00879-204ENST00000466560 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
LINC00879-204ENST00000466560 ERBB3P21860 1342 aa11.08□□□□□ -0.64
LINC00879-204ENST00000466560 PCDH10Q9P2E7 1040 aa11.07□□□□□ -0.64
LINC00879-204ENST00000466560 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
LINC00879-204ENST00000466560 MFSD10Q14728 455 aa11.06□□□□□ -0.64
LINC00879-204ENST00000466560 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
LINC00879-204ENST00000466560 NUDT7P0C024 238 aa11.05□□□□□ -0.64
LINC00879-204ENST00000466560 PTCD2Q8WV60 388 aaKnown RBP11.05□□□□□ -0.64
LINC00879-204ENST00000466560 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
LINC00879-204ENST00000466560 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00879-204ENST00000466560 VARS2Q5ST30 1063 aaKnown RBP11.02□□□□□ -0.65
LINC00879-204ENST00000466560 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
LINC00879-204ENST00000466560 TBC1D12O60347 775 aa11□□□□□ -0.65
LINC00879-204ENST00000466560 OXER1Q8TDS5 423 aa11□□□□□ -0.65
LINC00879-204ENST00000466560 LHX6Q9UPM6 363 aa10.97□□□□□ -0.65
LINC00879-204ENST00000466560 KDM4FA0A1W2PPD8 638 aa10.95□□□□□ -0.66
LINC00879-204ENST00000466560 EMILIN3Q9NT22 766 aa10.94□□□□□ -0.66
LINC00879-204ENST00000466560 ZNF687Q8N1G0 1237 aa10.92□□□□□ -0.66
LINC00879-204ENST00000466560 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
LINC00879-204ENST00000466560 CAMK2BQ13554 666 aa10.91□□□□□ -0.66
LINC00879-204ENST00000466560 KRTAP3-3Q9BYR6 98 aa10.91□□□□□ -0.66
LINC00879-204ENST00000466560 KRTAP3-2Q9BYR7 98 aa10.91□□□□□ -0.66
LINC00879-204ENST00000466560 PLSCR2Q9NRY7 297 aa10.9□□□□□ -0.66
LINC00879-204ENST00000466560 WDR70Q9NW82 654 aa10.9□□□□□ -0.66
LINC00879-204ENST00000466560 EVI5O60447 810 aa10.88□□□□□ -0.67
LINC00879-204ENST00000466560 PSDA5PKW4 1024 aaPredicted RBP10.87□□□□□ -0.67
LINC00879-204ENST00000466560 DPYSL4O14531 572 aa10.84□□□□□ -0.67
LINC00879-204ENST00000466560 E2F4Q16254 413 aa10.83□□□□□ -0.68
LINC00879-204ENST00000466560 PPP4R3BQ5MIZ7 849 aa10.83□□□□□ -0.68
LINC00879-204ENST00000466560 ANO8Q9HCE9 1232 aaPredicted RBP10.83□□□□□ -0.68
LINC00879-204ENST00000466560 ZNF454Q8N9F8 522 aa10.81□□□□□ -0.68
LINC00879-204ENST00000466560 POTEEQ6S8J3 1075 aa10.8□□□□□ -0.68
LINC00879-204ENST00000466560 AXIN2Q9Y2T1 843 aa10.8□□□□□ -0.68
LINC00879-204ENST00000466560 PBX2P40425 430 aa10.79□□□□□ -0.68
LINC00879-204ENST00000466560 FOSBP53539 338 aa10.79□□□□□ -0.68
LINC00879-204ENST00000466560 SPNS2Q8IVW8 549 aa10.79□□□□□ -0.68
LINC00879-204ENST00000466560 JPH4Q96JJ6 628 aa10.77□□□□□ -0.69
LINC00879-204ENST00000466560 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
LINC00879-204ENST00000466560 ARHGAP33O14559 1287 aa10.75□□□□□ -0.69
LINC00879-204ENST00000466560 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
LINC00879-204ENST00000466560 BCANQ96GW7 911 aa10.75□□□□□ -0.69
LINC00879-204ENST00000466560 PSEN2P49810 448 aa10.74□□□□□ -0.69
LINC00879-204ENST00000466560 PDIA6Q15084 440 aa10.73□□□□□ -0.69
LINC00879-204ENST00000466560 ZDHHC16Q969W1 377 aa10.73□□□□□ -0.69
LINC00879-204ENST00000466560 ARIH1Q9Y4X5 557 aaPredicted RBP10.73□□□□□ -0.69
LINC00879-204ENST00000466560 SPDYE16A6NNV3 312 aaPredicted RBP10.72□□□□□ -0.69
LINC00879-204ENST00000466560 KCNK17Q96T54 332 aa10.72□□□□□ -0.69
LINC00879-204ENST00000466560 BCL2L12Q9HB09 334 aa10.72□□□□□ -0.69
LINC00879-204ENST00000466560 PCDHGA10Q9Y5H3 936 aa10.72□□□□□ -0.69
LINC00879-204ENST00000466560 ADAM33Q9BZ11 813 aa10.71□□□□□ -0.69
LINC00879-204ENST00000466560 PHF14O94880 888 aa10.7□□□□□ -0.7
LINC00879-204ENST00000466560 MMRN1Q13201 1228 aa10.7□□□□□ -0.7
LINC00879-204ENST00000466560 DMRTA1Q5VZB9 504 aa10.7□□□□□ -0.7
LINC00879-204ENST00000466560 DDX12PQ92771 950 aa10.7□□□□□ -0.7
LINC00879-204ENST00000466560 KCNH8Q96L42 1107 aa10.7□□□□□ -0.7
LINC00879-204ENST00000466560 PTGER2P43116 358 aa10.69□□□□□ -0.7
LINC00879-204ENST00000466560 KCNV2Q8TDN2 545 aa10.69□□□□□ -0.7
LINC00879-204ENST00000466560 PTPREP23469 700 aa10.68□□□□□ -0.7
LINC00879-204ENST00000466560 TYW1BQ6NUM6 668 aa10.68□□□□□ -0.7
LINC00879-204ENST00000466560 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
LINC00879-204ENST00000466560 EPAS1Q99814 870 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms