RNA–Protein interactions for RNA: ENST00000466308.1

CLSPN-204, Transcript of claspin, humanhuman

TSL 3

Gene CLSPN, Length 717 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-204ENST00000466308 TMEM106CQ9BVX2 250 aa12.2□□□□□ -0.46
CLSPN-204ENST00000466308 PDE4DQ08499 809 aa12.19□□□□□ -0.46
CLSPN-204ENST00000466308 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
CLSPN-204ENST00000466308 ZMYND15Q9H091 742 aa12.19□□□□□ -0.46
CLSPN-204ENST00000466308 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
CLSPN-204ENST00000466308 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
CLSPN-204ENST00000466308 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
CLSPN-204ENST00000466308 PDIA6Q15084 440 aa12.15□□□□□ -0.46
CLSPN-204ENST00000466308 DPYSL4O14531 572 aa12.14□□□□□ -0.47
CLSPN-204ENST00000466308 PHF12Q96QT6 1004 aa12.14□□□□□ -0.47
CLSPN-204ENST00000466308 EMILIN3Q9NT22 766 aa12.12□□□□□ -0.47
CLSPN-204ENST00000466308 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
CLSPN-204ENST00000466308 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
CLSPN-204ENST00000466308 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
CLSPN-204ENST00000466308 GPR37O15354 613 aa12.08□□□□□ -0.48
CLSPN-204ENST00000466308 MINK1Q8N4C8 1332 aaPredicted RBP12.07□□□□□ -0.48
CLSPN-204ENST00000466308 DSG2Q14126 1118 aa12.06□□□□□ -0.48
CLSPN-204ENST00000466308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLSPN-204ENST00000466308 UBTFP17480 764 aaKnown RBP12.05□□□□□ -0.48
CLSPN-204ENST00000466308 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
CLSPN-204ENST00000466308 FOXK1P85037 733 aa12.04□□□□□ -0.48
CLSPN-204ENST00000466308 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
CLSPN-204ENST00000466308 FAM117AQ9C073 453 aa12.04□□□□□ -0.48
CLSPN-204ENST00000466308 TIE1P35590 1138 aa12.03□□□□□ -0.48
CLSPN-204ENST00000466308 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
CLSPN-204ENST00000466308 MS4A3Q96HJ5 214 aa12.03□□□□□ -0.48
CLSPN-204ENST00000466308 ZNF316A6NFI3 1004 aaPredicted RBP12.02□□□□□ -0.49
CLSPN-204ENST00000466308 MAP2K5Q13163 448 aa12.02□□□□□ -0.49
CLSPN-204ENST00000466308 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
CLSPN-204ENST00000466308 PODXL2Q9NZ53 605 aa12.01□□□□□ -0.49
CLSPN-204ENST00000466308 AMHR2Q16671 573 aa12□□□□□ -0.49
CLSPN-204ENST00000466308 PLEKHG3A1L390 1219 aa11.98□□□□□ -0.49
CLSPN-204ENST00000466308 TTLL13PA6NNM8 815 aa11.98□□□□□ -0.49
CLSPN-204ENST00000466308 IRF6O14896 467 aa11.98□□□□□ -0.49
CLSPN-204ENST00000466308 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
CLSPN-204ENST00000466308 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
CLSPN-204ENST00000466308 MICALL2Q8IY33 904 aa11.97□□□□□ -0.49
CLSPN-204ENST00000466308 FLIIQ13045 1269 aa11.96□□□□□ -0.49
CLSPN-204ENST00000466308 GRXCR2A6NFK2 248 aa11.94□□□□□ -0.5
CLSPN-204ENST00000466308 GNPATO15228 680 aa11.94□□□□□ -0.5
CLSPN-204ENST00000466308 PARP9Q8IXQ6 854 aa11.94□□□□□ -0.5
CLSPN-204ENST00000466308 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
CLSPN-204ENST00000466308 GOPCQ9HD26 462 aa11.93□□□□□ -0.5
CLSPN-204ENST00000466308 MAP3K9P80192 1104 aa11.92□□□□□ -0.5
CLSPN-204ENST00000466308 HIC1Q14526 733 aa11.92□□□□□ -0.5
CLSPN-204ENST00000466308 DPY19L2Q6NUT2 758 aa11.92□□□□□ -0.5
CLSPN-204ENST00000466308 FCHSD2O94868 740 aa11.9□□□□□ -0.5
CLSPN-204ENST00000466308 OSBPP22059 807 aa11.9□□□□□ -0.5
CLSPN-204ENST00000466308 C1orf115Q9H7X2 142 aa11.9□□□□□ -0.5
CLSPN-204ENST00000466308 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
CLSPN-204ENST00000466308 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
CLSPN-204ENST00000466308 PTGER2P43116 358 aa11.88□□□□□ -0.51
CLSPN-204ENST00000466308 ARID3AQ99856 593 aa11.88□□□□□ -0.51
CLSPN-204ENST00000466308 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
CLSPN-204ENST00000466308 KIF3CO14782 793 aa11.87□□□□□ -0.51
CLSPN-204ENST00000466308 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
CLSPN-204ENST00000466308 TMEM121BQ9BXQ6 578 aaPredicted RBP11.86□□□□□ -0.51
CLSPN-204ENST00000466308 TTLL12Q14166 644 aaPredicted RBP11.85□□□□□ -0.51
CLSPN-204ENST00000466308 TRIM26Q12899 539 aaPredicted RBP11.84□□□□□ -0.51
CLSPN-204ENST00000466308 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
CLSPN-204ENST00000466308 APBB1O00213 710 aa11.83□□□□□ -0.52
CLSPN-204ENST00000466308 ONECUT3O60422 494 aaPredicted RBP11.83□□□□□ -0.52
CLSPN-204ENST00000466308 FECHP22830 423 aa11.83□□□□□ -0.52
CLSPN-204ENST00000466308 BOLA1Q9Y3E2 137 aa11.82□□□□□ -0.52
CLSPN-204ENST00000466308 ARID3CA6NKF2 412 aa11.8□□□□□ -0.52
CLSPN-204ENST00000466308 G3V3G9 751 aa11.8□□□□□ -0.52
CLSPN-204ENST00000466308 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
CLSPN-204ENST00000466308 UPF1Q92900 1129 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLSPN-204ENST00000466308 PCMTD1Q96MG8 357 aaPredicted RBP11.8□□□□□ -0.52
CLSPN-204ENST00000466308 A6NJR5 290 aa11.79□□□□□ -0.52
CLSPN-204ENST00000466308 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
CLSPN-204ENST00000466308 DDX12PQ92771 950 aa11.79□□□□□ -0.52
CLSPN-204ENST00000466308 PTGDRQ13258 359 aa11.78□□□□□ -0.52
CLSPN-204ENST00000466308 TBC1D12O60347 775 aa11.77□□□□□ -0.53
CLSPN-204ENST00000466308 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
CLSPN-204ENST00000466308 RANGAP1P46060 587 aaPredicted RBP11.76□□□□□ -0.53
CLSPN-204ENST00000466308 IRX5P78411 483 aaPredicted RBP11.76□□□□□ -0.53
CLSPN-204ENST00000466308 MS4A1P11836 297 aa11.75□□□□□ -0.53
CLSPN-204ENST00000466308 HRCP23327 699 aa11.75□□□□□ -0.53
CLSPN-204ENST00000466308 IER5LQ5T953 404 aa11.74□□□□□ -0.53
CLSPN-204ENST00000466308 TRAK2O60296 914 aa11.73□□□□□ -0.53
CLSPN-204ENST00000466308 SH3D19Q5HYK7 790 aa11.73□□□□□ -0.53
CLSPN-204ENST00000466308 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
CLSPN-204ENST00000466308 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
CLSPN-204ENST00000466308 EVI5O60447 810 aa11.71□□□□□ -0.53
CLSPN-204ENST00000466308 CLUAP1Q96AJ1 413 aa11.71□□□□□ -0.53
CLSPN-204ENST00000466308 CLCN1P35523 988 aa11.7□□□□□ -0.54
CLSPN-204ENST00000466308 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
CLSPN-204ENST00000466308 CLCN6P51797 869 aa11.69□□□□□ -0.54
CLSPN-204ENST00000466308 ATN1P54259 1190 aaPredicted RBP11.69□□□□□ -0.54
CLSPN-204ENST00000466308 MCM6Q14566 821 aa11.69□□□□□ -0.54
CLSPN-204ENST00000466308 L3MBTL3Q96JM7 780 aaPredicted RBP11.69□□□□□ -0.54
CLSPN-204ENST00000466308 CCDC82Q8N4S0 544 aa11.68□□□□□ -0.54
CLSPN-204ENST00000466308 TMUB1Q9BVT8 246 aa11.68□□□□□ -0.54
CLSPN-204ENST00000466308 PDIA4P13667 645 aaKnown RBP11.67□□□□□ -0.54
CLSPN-204ENST00000466308 GPCPD1Q9NPB8 672 aa11.66□□□□□ -0.54
CLSPN-204ENST00000466308 PLCG2P16885 1265 aa11.65□□□□□ -0.54
CLSPN-204ENST00000466308 SKIV2LQ15477 1246 aaKnown RBP11.65□□□□□ -0.54
CLSPN-204ENST00000466308 TMEM92Q6UXU6 159 aa11.65□□□□□ -0.54
CLSPN-204ENST00000466308 ATMINO43313 823 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms