RNA–Protein interactions for RNA: ENST00000466247.1

RBM6-215, Transcript of RNA binding motif protein 6, human

TSL 2

Gene RBM6, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM6-215	ENST00000466247	FAM163A	Q96GL9	167 aa	Predicted RBP	11.72	□□□□□ -0.53
RBM6-215	ENST00000466247	CFAP44	Q96MT7	982 aa		11.72	□□□□□ -0.53
RBM6-215	ENST00000466247	C2orf72	A6NCS6	295 aa		11.71	□□□□□ -0.53
RBM6-215	ENST00000466247	KIF3C	O14782	793 aa		11.7	□□□□□ -0.54
RBM6-215	ENST00000466247	HOXB3	P14651	431 aa	Predicted RBP	11.65	□□□□□ -0.54
RBM6-215	ENST00000466247	DOK7	Q18PE1	504 aa		11.65	□□□□□ -0.54
RBM6-215	ENST00000466247	GPHN	Q9NQX3	736 aa	Predicted RBP	11.65	□□□□□ -0.54
RBM6-215	ENST00000466247	ST18	O60284	1047 aa		11.63	□□□□□ -0.55
RBM6-215	ENST00000466247	LCE2D	Q5TA82	110 aa	Predicted RBP	11.63	□□□□□ -0.55
RBM6-215	ENST00000466247	CRISPLD2	Q9H0B8	497 aa		11.63	□□□□□ -0.55
RBM6-215	ENST00000466247	PDE4A	P27815	886 aa		11.61	□□□□□ -0.55
RBM6-215	ENST00000466247	ZNF710	Q8N1W2	664 aa		11.61	□□□□□ -0.55
RBM6-215	ENST00000466247	NCKAP5L	Q9HCH0	1330 aa		11.6	□□□□□ -0.55
RBM6-215	ENST00000466247	RIMBP2	O15034	1052 aa		11.6	□□□□□ -0.55
RBM6-215	ENST00000466247	FOXK1	P85037	733 aa		11.6	□□□□□ -0.55
RBM6-215	ENST00000466247	CADPS2	Q86UW7	1296 aa		11.6	□□□□□ -0.55
RBM6-215	ENST00000466247	DSG2	Q14126	1118 aa		11.58	□□□□□ -0.56
RBM6-215	ENST00000466247	PLPP6	Q8IY26	295 aa		11.57	□□□□□ -0.56
RBM6-215	ENST00000466247	LARP6	Q9BRS8	491 aa	Known RBP	11.56	□□□□□ -0.56
RBM6-215	ENST00000466247	ZSWIM6	Q9HCJ5	1215 aa		11.56	□□□□□ -0.56
RBM6-215	ENST00000466247	PPP1R15B	Q5SWA1	713 aa		11.55	□□□□□ -0.56
RBM6-215	ENST00000466247	DDX27	Q96GQ7	796 aa	Known RBP	11.54	□□□□□ -0.56
RBM6-215	ENST00000466247	SLC34A2	O95436	690 aa		11.53	□□□□□ -0.56
RBM6-215	ENST00000466247	POTEM	A6NI47	508 aa		11.52	□□□□□ -0.57
RBM6-215	ENST00000466247	HOXB1	P14653	301 aa	Predicted RBP	11.52	□□□□□ -0.57
RBM6-215	ENST00000466247	PLCB2	Q00722	1185 aa		11.52	□□□□□ -0.57
RBM6-215	ENST00000466247	MFSD10	Q14728	455 aa		11.52	□□□□□ -0.57
RBM6-215	ENST00000466247	POTEG	Q6S5H5	508 aa		11.52	□□□□□ -0.57
RBM6-215	ENST00000466247	MARVELD3	Q96A59	401 aa		11.51	□□□□□ -0.57
RBM6-215	ENST00000466247	GPR153	Q6NV75	609 aa		11.49	□□□□□ -0.57
RBM6-215	ENST00000466247	EMP3	P54852	163 aa		11.48	□□□□□ -0.57
RBM6-215	ENST00000466247	ARSI	Q5FYB1	569 aa		11.48	□□□□□ -0.57
RBM6-215	ENST00000466247	TSHZ2	Q9NRE2	1034 aa		11.47	□□□□□ -0.57
RBM6-215	ENST00000466247	PCDHGA4	Q9Y5G9	962 aa		11.47	□□□□□ -0.57
RBM6-215	ENST00000466247	PTCD2	Q8WV60	388 aa	Known RBP	11.46	□□□□□ -0.57
RBM6-215	ENST00000466247	TBC1D12	O60347	775 aa		11.43	□□□□□ -0.58
RBM6-215	ENST00000466247	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
RBM6-215	ENST00000466247	OXER1	Q8TDS5	423 aa		11.42	□□□□□ -0.58
RBM6-215	ENST00000466247	FAM205C	A6NFA0	338 aa		11.41	□□□□□ -0.58
RBM6-215	ENST00000466247	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
RBM6-215	ENST00000466247	ERBB3	P21860	1342 aa		11.4	□□□□□ -0.58
RBM6-215	ENST00000466247	NUDT7	P0C024	238 aa		11.4	□□□□□ -0.58
RBM6-215	ENST00000466247	WDR70	Q9NW82	654 aa		11.4	□□□□□ -0.58
RBM6-215	ENST00000466247	CAMK2B	Q13554	666 aa		11.37	□□□□□ -0.59
RBM6-215	ENST00000466247	HS3ST6	Q96QI5	342 aa		11.37	□□□□□ -0.59
RBM6-215	ENST00000466247	HAP1	P54257	671 aa	Predicted RBP	11.36	□□□□□ -0.59
RBM6-215	ENST00000466247	EMILIN3	Q9NT22	766 aa		11.36	□□□□□ -0.59
RBM6-215	ENST00000466247	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.35	□□□□□ -0.59
RBM6-215	ENST00000466247	VARS2	Q5ST30	1063 aa	Known RBP	11.34	□□□□□ -0.59
RBM6-215	ENST00000466247	PCDH10	Q9P2E7	1040 aa		11.34	□□□□□ -0.59
RBM6-215	ENST00000466247	KDM4F	A0A1W2PPD8	638 aa		11.33	□□□□□ -0.6
RBM6-215	ENST00000466247	POTEB3	A0JP26	581 aa		11.33	□□□□□ -0.6
RBM6-215	ENST00000466247	MAP3K9	P80192	1104 aa		11.33	□□□□□ -0.6
RBM6-215	ENST00000466247	POTEB	Q6S5H4	581 aa		11.33	□□□□□ -0.6
RBM6-215	ENST00000466247	CDAN1	Q8IWY9	1227 aa		11.33	□□□□□ -0.6
RBM6-215	ENST00000466247	E2F4	Q16254	413 aa		11.32	□□□□□ -0.6
RBM6-215	ENST00000466247	LHX6	Q9UPM6	363 aa		11.32	□□□□□ -0.6
RBM6-215	ENST00000466247	EVI5	O60447	810 aa		11.29	□□□□□ -0.6
RBM6-215	ENST00000466247	PSD	A5PKW4	1024 aa	Predicted RBP	11.27	□□□□□ -0.61
RBM6-215	ENST00000466247	DPYSL4	O14531	572 aa		11.27	□□□□□ -0.61
RBM6-215	ENST00000466247	ZNF687	Q8N1G0	1237 aa		11.25	□□□□□ -0.61
RBM6-215	ENST00000466247	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.25	□□□□□ -0.61
RBM6-215	ENST00000466247	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.22	□□□□□ -0.61
RBM6-215	ENST00000466247	PPP4R3B	Q5MIZ7	849 aa		11.21	□□□□□ -0.61
RBM6-215	ENST00000466247	PDIA6	Q15084	440 aa		11.19	□□□□□ -0.62
RBM6-215	ENST00000466247	ZNF454	Q8N9F8	522 aa		11.19	□□□□□ -0.62
RBM6-215	ENST00000466247	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.18	□□□□□ -0.62
RBM6-215	ENST00000466247	FOSB	P53539	338 aa		11.18	□□□□□ -0.62
RBM6-215	ENST00000466247	KCNV2	Q8TDN2	545 aa		11.18	□□□□□ -0.62
RBM6-215	ENST00000466247	JPH4	Q96JJ6	628 aa		11.18	□□□□□ -0.62
RBM6-215	ENST00000466247	P3H3	Q8IVL6	736 aa		11.17	□□□□□ -0.62
RBM6-215	ENST00000466247	VSIG10	Q8N0Z9	540 aa		11.17	□□□□□ -0.62
RBM6-215	ENST00000466247	KRTAP3-3	Q9BYR6	98 aa		11.17	□□□□□ -0.62
RBM6-215	ENST00000466247	KRTAP3-2	Q9BYR7	98 aa		11.17	□□□□□ -0.62
RBM6-215	ENST00000466247	PBX2	P40425	430 aa		11.16	□□□□□ -0.62
RBM6-215	ENST00000466247	ARHGEF1	Q92888	912 aa	Known RBP	11.16	□□□□□ -0.62
RBM6-215	ENST00000466247	KDM2A	Q9Y2K7	1162 aa		11.16	□□□□□ -0.62
RBM6-215	ENST00000466247	PTGER2	P43116	358 aa		11.13	□□□□□ -0.63
RBM6-215	ENST00000466247	PHF14	O94880	888 aa		11.12	□□□□□ -0.63
RBM6-215	ENST00000466247	POTEE	Q6S8J3	1075 aa		11.12	□□□□□ -0.63
RBM6-215	ENST00000466247	ZDHHC16	Q969W1	377 aa		11.12	□□□□□ -0.63
RBM6-215	ENST00000466247	PCDHGA10	Q9Y5H3	936 aa		11.12	□□□□□ -0.63
RBM6-215	ENST00000466247	ARHGAP33	O14559	1287 aa		11.11	□□□□□ -0.63
RBM6-215	ENST00000466247	AXIN2	Q9Y2T1	843 aa		11.11	□□□□□ -0.63
RBM6-215	ENST00000466247	TYW1B	Q6NUM6	668 aa		11.1	□□□□□ -0.63
RBM6-215	ENST00000466247	DDX12P	Q92771	950 aa		11.1	□□□□□ -0.63
RBM6-215	ENST00000466247	FBXW7	Q969H0	707 aa		11.1	□□□□□ -0.63
RBM6-215	ENST00000466247	BCL2L12	Q9HB09	334 aa		11.1	□□□□□ -0.63
RBM6-215	ENST00000466247	KCNH8	Q96L42	1107 aa		11.09	□□□□□ -0.63
RBM6-215	ENST00000466247	EPAS1	Q99814	870 aa		11.09	□□□□□ -0.63
RBM6-215	ENST00000466247	LSM11	P83369	360 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
RBM6-215	ENST00000466247	ADAM33	Q9BZ11	813 aa		11.08	□□□□□ -0.64
RBM6-215	ENST00000466247	PTPRE	P23469	700 aa		11.07	□□□□□ -0.64
RBM6-215	ENST00000466247	KCNK17	Q96T54	332 aa		11.07	□□□□□ -0.64
RBM6-215	ENST00000466247	PSEN2	P49810	448 aa		11.06	□□□□□ -0.64
RBM6-215	ENST00000466247	ANKRD13D	Q6ZTN6	518 aa		11.06	□□□□□ -0.64
RBM6-215	ENST00000466247	SLC24A1	O60721	1099 aa		11.05	□□□□□ -0.64
RBM6-215	ENST00000466247	NBR1	Q14596	966 aa		11.05	□□□□□ -0.64
RBM6-215	ENST00000466247	GRXCR2	A6NFK2	248 aa		11.04	□□□□□ -0.64
RBM6-215	ENST00000466247	DMRTA1	Q5VZB9	504 aa		11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms