RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
NPHP3-203ENST00000465756 ARID4BQ4LE39 1312 aaPredicted RBP16.69■□□□□ 0.26
NPHP3-203ENST00000465756 RSPH4AQ5TD94 716 aa16.68■□□□□ 0.26
NPHP3-203ENST00000465756 MAP3K1Q13233 1512 aa16.67■□□□□ 0.26
NPHP3-203ENST00000465756 SCAPERQ9BY12 1400 aa16.67■□□□□ 0.26
NPHP3-203ENST00000465756 MAGI2Q86UL8 1455 aa16.66■□□□□ 0.26
NPHP3-203ENST00000465756 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
NPHP3-203ENST00000465756 PPRC1Q5VV67 1664 aaKnown RBP16.65■□□□□ 0.26
NPHP3-203ENST00000465756 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
NPHP3-203ENST00000465756 SUPT6HQ7KZ85 1726 aaKnown RBP16.63■□□□□ 0.25
NPHP3-203ENST00000465756 ZNF518AQ6AHZ1 1483 aa16.62■□□□□ 0.25
NPHP3-203ENST00000465756 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
NPHP3-203ENST00000465756 TIAM1Q13009 1591 aa16.61■□□□□ 0.25
NPHP3-203ENST00000465756 RAPGEF3O95398 923 aa16.59■□□□□ 0.25
NPHP3-203ENST00000465756 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
NPHP3-203ENST00000465756 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
NPHP3-203ENST00000465756 SPAG9O60271 1321 aaKnown RBP16.58■□□□□ 0.24
NPHP3-203ENST00000465756 PREX2Q70Z35 1606 aa16.58■□□□□ 0.24
NPHP3-203ENST00000465756 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
NPHP3-203ENST00000465756 KIAA1107Q9UPP5 1409 aa16.57■□□□□ 0.24
NPHP3-203ENST00000465756 LRRC9Q6ZRR7 1453 aa16.56■□□□□ 0.24
NPHP3-203ENST00000465756 NCOA2Q15596 1464 aa16.55■□□□□ 0.24
NPHP3-203ENST00000465756 GPATCH8Q9UKJ3 1502 aaKnown RBP16.54■□□□□ 0.24
NPHP3-203ENST00000465756 ZMYM4Q5VZL5 1548 aa16.53■□□□□ 0.24
NPHP3-203ENST00000465756 COL17A1Q9UMD9 1497 aaPredicted RBP16.52■□□□□ 0.23
NPHP3-203ENST00000465756 C9orf84Q5VXU9 1444 aa16.52■□□□□ 0.23
NPHP3-203ENST00000465756 MIA2Q96PC5 1412 aa16.52■□□□□ 0.23
NPHP3-203ENST00000465756 ATP10AO60312 1499 aa16.51■□□□□ 0.23
NPHP3-203ENST00000465756 ARHGEF40Q8TER5 1519 aa16.51■□□□□ 0.23
NPHP3-203ENST00000465756 ABCC1P33527 1531 aa16.49■□□□□ 0.23
NPHP3-203ENST00000465756 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
NPHP3-203ENST00000465756 LRRIQ1Q96JM4 1722 aa16.48■□□□□ 0.23
NPHP3-203ENST00000465756 MYOM3Q5VTT5 1437 aa16.48■□□□□ 0.23
NPHP3-203ENST00000465756 HECW2Q9P2P5 1572 aa16.47■□□□□ 0.23
NPHP3-203ENST00000465756 CDC42BPAQ5VT25 1732 aa16.46■□□□□ 0.23
NPHP3-203ENST00000465756 HNRNPMP52272 730 aaKnown RBP eCLIP16.46■□□□□ 0.23
NPHP3-203ENST00000465756 AFAP1Q8N556 730 aa16.46■□□□□ 0.23
NPHP3-203ENST00000465756 CCDC141Q6ZP82 1450 aa16.45■□□□□ 0.22
NPHP3-203ENST00000465756 RICTORQ6R327 1708 aa16.45■□□□□ 0.22
NPHP3-203ENST00000465756 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
NPHP3-203ENST00000465756 CDC42BPBQ9Y5S2 1711 aa16.44■□□□□ 0.22
NPHP3-203ENST00000465756 RTEL1-TNFRSF6BF6WH68 1400 aa16.43■□□□□ 0.22
NPHP3-203ENST00000465756 SYCP2Q9BX26 1530 aa16.43■□□□□ 0.22
NPHP3-203ENST00000465756 MLECQ14165 292 aa16.42■□□□□ 0.22
NPHP3-203ENST00000465756 KDM5CP41229 1560 aa16.41■□□□□ 0.22
NPHP3-203ENST00000465756 CNTLNQ9NXG0 1405 aa16.41■□□□□ 0.22
NPHP3-203ENST00000465756 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
NPHP3-203ENST00000465756 FAM50AQ14320 339 aaKnown RBP16.4■□□□□ 0.22
NPHP3-203ENST00000465756 TRAPPC8Q9Y2L5 1435 aa16.4■□□□□ 0.22
NPHP3-203ENST00000465756 FRMPD1Q5SYB0 1578 aa16.39■□□□□ 0.21
NPHP3-203ENST00000465756 SAMD9LQ8IVG5 1584 aa16.39■□□□□ 0.21
NPHP3-203ENST00000465756 KANK4Q5T7N3 995 aaPredicted RBP16.38■□□□□ 0.21
NPHP3-203ENST00000465756 ATP7AQ04656 1500 aa16.38■□□□□ 0.21
NPHP3-203ENST00000465756 REREQ9P2R6 1566 aa16.37■□□□□ 0.21
NPHP3-203ENST00000465756 YEATS2Q9ULM3 1422 aa16.37■□□□□ 0.21
NPHP3-203ENST00000465756 ARHGEF5Q12774 1597 aa16.37■□□□□ 0.21
NPHP3-203ENST00000465756 AGLP35573 1532 aa16.35■□□□□ 0.21
NPHP3-203ENST00000465756 A2MP01023 1474 aa16.35■□□□□ 0.21
NPHP3-203ENST00000465756 FGD6Q6ZV73 1430 aa16.35■□□□□ 0.21
NPHP3-203ENST00000465756 ANKRD30AQ9BXX3 1397 aa16.35■□□□□ 0.21
NPHP3-203ENST00000465756 KDM4FA0A1W2PPD8 638 aa16.33■□□□□ 0.2
NPHP3-203ENST00000465756 KANK1Q14678 1352 aa16.33■□□□□ 0.2
NPHP3-203ENST00000465756 DIP2CQ9Y2E4 1556 aa16.31■□□□□ 0.2
NPHP3-203ENST00000465756 DHX29Q7Z478 1369 aaKnown RBP16.31■□□□□ 0.2
NPHP3-203ENST00000465756 ZNF644Q9H582 1327 aaPredicted RBP16.31■□□□□ 0.2
NPHP3-203ENST00000465756 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
NPHP3-203ENST00000465756 ACIN1Q9UKV3 1341 aaKnown RBP16.3■□□□□ 0.2
NPHP3-203ENST00000465756 BCORL1Q5H9F3 1711 aa16.3■□□□□ 0.2
NPHP3-203ENST00000465756 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
NPHP3-203ENST00000465756 GGT6Q6P531 493 aa16.29■□□□□ 0.2
NPHP3-203ENST00000465756 KIF3BO15066 747 aa16.29■□□□□ 0.2
NPHP3-203ENST00000465756 ARHGEF12Q9NZN5 1544 aa16.29■□□□□ 0.2
NPHP3-203ENST00000465756 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
NPHP3-203ENST00000465756 PTPN23Q9H3S7 1636 aa16.29■□□□□ 0.2
NPHP3-203ENST00000465756 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
NPHP3-203ENST00000465756 MBD5Q9P267 1494 aa16.28■□□□□ 0.2
NPHP3-203ENST00000465756 INO80Q9ULG1 1556 aaPredicted RBP16.27■□□□□ 0.19
NPHP3-203ENST00000465756 TCOF1Q13428 1488 aaKnown RBP16.26■□□□□ 0.19
NPHP3-203ENST00000465756 PTPRMP28827 1452 aa16.26■□□□□ 0.19
NPHP3-203ENST00000465756 MAST1Q9Y2H9 1570 aa16.25■□□□□ 0.19
NPHP3-203ENST00000465756 ABCA6Q8N139 1617 aa16.25■□□□□ 0.19
NPHP3-203ENST00000465756 ADAMTSL3P82987 1691 aa16.24■□□□□ 0.19
NPHP3-203ENST00000465756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.24■□□□□ 0.19
NPHP3-203ENST00000465756 KIDINS220Q9ULH0 1771 aa16.24■□□□□ 0.19
NPHP3-203ENST00000465756 WASHC2CQ9Y4E1 1318 aa16.24■□□□□ 0.19
NPHP3-203ENST00000465756 DUOX2Q9NRD8 1548 aa16.23■□□□□ 0.19
NPHP3-203ENST00000465756 KIF15Q9NS87 1388 aa16.23■□□□□ 0.19
NPHP3-203ENST00000465756 DAPK1P53355 1430 aa16.23■□□□□ 0.19
NPHP3-203ENST00000465756 FER1L4A9Z1Z3 1794 aa16.22■□□□□ 0.19
NPHP3-203ENST00000465756 RIMS1Q86UR5 1692 aaKnown RBP16.22■□□□□ 0.19
NPHP3-203ENST00000465756 MADDQ8WXG6 1647 aa16.22■□□□□ 0.19
NPHP3-203ENST00000465756 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
NPHP3-203ENST00000465756 UHRF1BP1Q6BDS2 1440 aa16.19■□□□□ 0.18
NPHP3-203ENST00000465756 ERBINQ96RT1 1412 aa16.19■□□□□ 0.18
NPHP3-203ENST00000465756 DNMT1P26358 1616 aaKnown RBP16.19■□□□□ 0.18
NPHP3-203ENST00000465756 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
NPHP3-203ENST00000465756 RRP7BPQ9NSQ0 103 aa16.18■□□□□ 0.18
NPHP3-203ENST00000465756 CHIC2Q9UKJ5 165 aa16.18■□□□□ 0.18
NPHP3-203ENST00000465756 ABCC5O15440 1437 aa16.18■□□□□ 0.18
NPHP3-203ENST00000465756 ITGAEP38570 1179 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms